RNA–Protein interactions for RNA: ENST00000579505.5

MSI2-210, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-210ENST00000579505 SF3B1O75533 1304 aaKnown RBP eCLIP19.3■□□□□ 0.688e-7■■■■■ 158.5
MSI2-210ENST00000579505 AGGF1Q8N302 714 aaeCLIP17.66■□□□□ 0.427e-9■■■■■ 123
MSI2-210ENST00000579505 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.08■□□□□ 0.641e-6■■■■■ 108.7
MSI2-210ENST00000579505 HNRNPLP14866 589 aaKnown RBP eCLIP18.32■□□□□ 0.523e-8■■■■■ 63.8
MSI2-210ENST00000579505 AARSP49588 968 aaKnown RBP eCLIP19.26■□□□□ 0.678e-6■■■■■ 52.4
MSI2-210ENST00000579505 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.01■□□□□ 0.318e-6■■■■■ 46.4
MSI2-210ENST00000579505 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.68■□□□□ 0.427e-10■■■■■ 45.7
MSI2-210ENST00000579505 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.34■■□□□ 1.014e-7■■■■■ 45.2
MSI2-210ENST00000579505 GTF2F1P35269 517 aaKnown RBP eCLIP19.14■□□□□ 0.655e-7■■■■■ 37.9
MSI2-210ENST00000579505 PTBP1P26599 531 aaKnown RBP eCLIP14.53□□□□□ -0.086e-10■■■■■ 37.3
MSI2-210ENST00000579505 EFTUD2Q15029 972 aaKnown RBP eCLIP17.38■□□□□ 0.374e-9■■■■■ 34
MSI2-210ENST00000579505 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.81■□□□□ 0.442e-6■■■■■ 33.3
MSI2-210ENST00000579505 DKC1O60832 514 aaKnown RBP eCLIP20.17■□□□□ 0.822e-8■■■■■ 31.9
MSI2-210ENST00000579505 EIF4G2P78344 907 aaKnown RBP eCLIP25.09■■□□□ 1.612e-6■■■■■ 31.2
MSI2-210ENST00000579505 TARDBPQ13148 414 aaKnown RBP eCLIP17.3■□□□□ 0.368e-7■■■■■ 27.7
MSI2-210ENST00000579505 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.58■□□□□ 0.083e-8■■■■■ 27
MSI2-210ENST00000579505 AQRO60306 1485 aaKnown RBP eCLIP30.5■■■□□ 2.478e-7■■■■■ 26.9
MSI2-210ENST00000579505 NONOQ15233 471 aaKnown RBP eCLIP20.39■□□□□ 0.852e-7■■■■□ 25.4
MSI2-210ENST00000579505 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.4■□□□□ 0.541e-7■■■■□ 25.1
MSI2-210ENST00000579505 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.64■□□□□ 0.572e-6■■■■□ 24.6
MSI2-210ENST00000579505 QKIQ96PU8 341 aaKnown RBP eCLIP18.11■□□□□ 0.492e-7■■■■□ 24.2
MSI2-210ENST00000579505 TAF15Q92804 592 aaKnown RBP eCLIP14.23□□□□□ -0.138e-7■■■■□ 23.9
MSI2-210ENST00000579505 CDC40O60508 579 aaKnown RBP eCLIP16.28■□□□□ 0.28e-7■■■■□ 23.9
MSI2-210ENST00000579505 SF3B4Q15427 424 aaKnown RBP eCLIP16.3■□□□□ 0.22e-7■■■■□ 23.1
MSI2-210ENST00000579505 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.71■■□□□ 1.074e-7■■■■□ 21.8
MSI2-210ENST00000579505 HNRNPKP61978 463 aaKnown RBP eCLIP17.76■□□□□ 0.432e-6■■■■□ 21.3
MSI2-210ENST00000579505 YBX3P16989 372 aaKnown RBP eCLIP22.49■■□□□ 1.191e-6■■■■□ 21.3
MSI2-210ENST00000579505 SF3A3Q12874 501 aaKnown RBP eCLIP16.54■□□□□ 0.244e-7■■■■□ 21.1
MSI2-210ENST00000579505 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.65■■□□□ 1.542e-6■■■■□ 20.2
MSI2-210ENST00000579505 SAFB2Q14151 953 aaKnown RBP eCLIP25.33■■□□□ 1.652e-6■■■■□ 20
MSI2-210ENST00000579505 PCBP2Q15366 365 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■■■□□ 18.6
MSI2-210ENST00000579505 FUSP35637 526 aaKnown RBP eCLIP11.67□□□□□ -0.549e-6■■■□□ 18.4
MSI2-210ENST00000579505 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.89■■□□□ 1.417e-9■■■□□ 18.1
MSI2-210ENST00000579505 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.78■□□□□ 0.761e-6■■■□□ 17.6
MSI2-210ENST00000579505 SRSF7Q16629 238 aaKnown RBP eCLIP14.64□□□□□ -0.072e-9■■■□□ 16.9
MSI2-210ENST00000579505 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.78■□□□□ 0.66e-7■■■□□ 16.8
MSI2-210ENST00000579505 HNRNPMP52272 730 aaKnown RBP eCLIP27.58■■■□□ 2.013e-7■■■□□ 16.6
MSI2-210ENST00000579505 SFPQP23246 707 aaKnown RBP eCLIP19.78■□□□□ 0.764e-6■■■□□ 15.5
MSI2-210ENST00000579505 MATR3P43243 847 aaKnown RBP eCLIP19.61■□□□□ 0.732e-6■■■□□ 15
MSI2-210ENST00000579505 HNRNPUQ00839 825 aaKnown RBP eCLIP23.19■■□□□ 1.32e-11■■□□□ 14.3
MSI2-210ENST00000579505 ILF3Q12906 894 aaKnown RBP eCLIP17.69■□□□□ 0.425e-6■■□□□ 13.7
MSI2-210ENST00000579505 PRPF4O43172 522 aaKnown RBP eCLIP17.12■□□□□ 0.332e-6■■□□□ 12.7
MSI2-210ENST00000579505 PPIGQ13427 754 aaKnown RBP eCLIP19.85■□□□□ 0.773e-14■■□□□ 12.7
MSI2-210ENST00000579505 RBM22Q9NW64 420 aaKnown RBP eCLIP18.14■□□□□ 0.491e-8■■□□□ 12.4
MSI2-210ENST00000579505 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.9■□□□□ 0.622e-7■■□□□ 12.3
MSI2-210ENST00000579505 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.92□□□□□ -0.021e-6■■□□□ 12.3
MSI2-210ENST00000579505 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.93■□□□□ 0.462e-7■■□□□ 12.2
MSI2-210ENST00000579505 SRSF9Q13242 221 aaKnown RBP eCLIP11.16□□□□□ -0.624e-6■■□□□ 12.1
MSI2-210ENST00000579505 RBFOX2O43251 390 aaKnown RBP eCLIP14.28□□□□□ -0.129e-7■■□□□ 11.7
MSI2-210ENST00000579505 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.46■□□□□ 0.871e-6■■□□□ 11.6
MSI2-210ENST00000579505 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.31■□□□□ 0.22e-6■■□□□ 11.5
MSI2-210ENST00000579505 HLTFQ14527 1009 aaKnown RBP eCLIP17.72■□□□□ 0.439e-8■□□□□ 11.3
MSI2-210ENST00000579505 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.8■■□□□ 1.881e-7■□□□□ 11.2
MSI2-210ENST00000579505 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.58■□□□□ 0.244e-8■□□□□ 11.1
MSI2-210ENST00000579505 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.41■□□□□ 0.227e-6■□□□□ 9.5
MSI2-210ENST00000579505 SRSF1Q07955 248 aaKnown RBP eCLIP16.04■□□□□ 0.161e-8■□□□□ 9
MSI2-210ENST00000579505 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.78■□□□□ 0.281e-5■□□□□ 8.8
MSI2-210ENST00000579505 PABPN1Q86U42 306 aaKnown RBP eCLIP34.4■■■■□ 3.11e-5■□□□□ 8.6
Retrieved 58 of 58 RNA–protein pairs in 12.3 ms