RNA–Protein interactions for RNA: ENST00000533585.5

C11orf54-213, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-213ENST00000533585 CHIC1Q5VXU3 224 aa12.4□□□□□ -0.42
C11orf54-213ENST00000533585 AEBP2Q6ZN18 517 aaPredicted RBP11.8□□□□□ -0.52
C11orf54-213ENST00000533585 PHF23Q9BUL5 403 aaPredicted RBP11.01□□□□□ -0.65
C11orf54-213ENST00000533585 EHMT2Q96KQ7 1210 aa10.63□□□□□ -0.71
C11orf54-213ENST00000533585 PLPPR3Q6T4P5 718 aa10.49□□□□□ -0.73
C11orf54-213ENST00000533585 SLC24A1O60721 1099 aa10.42□□□□□ -0.74
C11orf54-213ENST00000533585 KCNA4P22459 653 aa10.16□□□□□ -0.78
C11orf54-213ENST00000533585 CSRNP3Q8WYN3 585 aa10.04□□□□□ -0.8
C11orf54-213ENST00000533585 SENP3Q9H4L4 574 aaPredicted RBP9.89□□□□□ -0.83
C11orf54-213ENST00000533585 SLC4A1APQ9BWU0 796 aaKnown RBP9.86□□□□□ -0.83
C11orf54-213ENST00000533585 RTN4Q9NQC3 1192 aaKnown RBP9.83□□□□□ -0.84
C11orf54-213ENST00000533585 AMER1Q5JTC6 1135 aaPredicted RBP9.82□□□□□ -0.84
C11orf54-213ENST00000533585 ADRA2BP18089 450 aa9.79□□□□□ -0.84
C11orf54-213ENST00000533585 PPP6R1Q9UPN7 881 aa9.42□□□□□ -0.9
C11orf54-213ENST00000533585 NCBP3Q53F19 620 aaKnown RBP9.39□□□□□ -0.91
C11orf54-213ENST00000533585 PPP4R3CPQ6ZMV5 832 aa9.36□□□□□ -0.91
C11orf54-213ENST00000533585 ZBTB22O15209 634 aa9.34□□□□□ -0.91
C11orf54-213ENST00000533585 NPM3O75607 178 aaKnown RBP9.23□□□□□ -0.93
C11orf54-213ENST00000533585 FOXD4L1Q9NU39 408 aa9.1□□□□□ -0.95
C11orf54-213ENST00000533585 PRKCSHP14314 528 aaPredicted RBP9.08□□□□□ -0.96
C11orf54-213ENST00000533585 FKBP8Q14318 412 aa9.06□□□□□ -0.96
C11orf54-213ENST00000533585 FOXD1Q16676 465 aa9.06□□□□□ -0.96
C11orf54-213ENST00000533585 BCANQ96GW7 911 aa9.03□□□□□ -0.96
C11orf54-213ENST00000533585 PLCB2Q00722 1185 aa9□□□□□ -0.97
C11orf54-213ENST00000533585 DAXXQ9UER7 740 aaPredicted RBP8.98□□□□□ -0.97
C11orf54-213ENST00000533585 TAOK2Q9UL54 1235 aa8.98□□□□□ -0.97
C11orf54-213ENST00000533585 HAP1P54257 671 aaPredicted RBP8.92□□□□□ -0.98
C11orf54-213ENST00000533585 CNKSR2Q8WXI2 1034 aa8.9□□□□□ -0.98
C11orf54-213ENST00000533585 TPRNQ4KMQ1 711 aa8.83□□□□□ -1
C11orf54-213ENST00000533585 PIAS4Q8N2W9 510 aaPredicted RBP8.8□□□□□ -1
C11orf54-213ENST00000533585 ARXQ96QS3 562 aa8.79□□□□□ -1
C11orf54-213ENST00000533585 VSIG10Q8N0Z9 540 aa8.77□□□□□ -1.01
C11orf54-213ENST00000533585 DNAJC5BQ9UF47 199 aa8.75□□□□□ -1.01
C11orf54-213ENST00000533585 TIMELESSQ9UNS1 1208 aa8.73□□□□□ -1.01
C11orf54-213ENST00000533585 SCAF1Q9H7N4 1312 aaKnown RBP8.69□□□□□ -1.02
C11orf54-213ENST00000533585 TULP1O00294 542 aaPredicted RBP8.68□□□□□ -1.02
C11orf54-213ENST00000533585 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
C11orf54-213ENST00000533585 DCAF8L2P0C7V8 631 aa8.66□□□□□ -1.02
C11orf54-213ENST00000533585 ERICH6Q7L0X2 663 aa8.6□□□□□ -1.03
C11orf54-213ENST00000533585 GTF3C3Q9Y5Q9 886 aa8.58□□□□□ -1.04
C11orf54-213ENST00000533585 HOMEZQ8IX15 550 aa8.57□□□□□ -1.04
C11orf54-213ENST00000533585 KDM2AQ9Y2K7 1162 aa8.54□□□□□ -1.04
C11orf54-213ENST00000533585 MYCNP04198 464 aaPredicted RBP8.52□□□□□ -1.05
C11orf54-213ENST00000533585 POTEDQ86YR6 584 aa8.52□□□□□ -1.05
C11orf54-213ENST00000533585 RNF216Q9NWF9 866 aaPredicted RBP8.49□□□□□ -1.05
C11orf54-213ENST00000533585 SLC4A2P04920 1241 aa8.48□□□□□ -1.05
C11orf54-213ENST00000533585 FBXO3Q9UK99 471 aa8.48□□□□□ -1.05
C11orf54-213ENST00000533585 FBLN2P98095 1184 aa8.47□□□□□ -1.05
C11orf54-213ENST00000533585 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.47□□□□□ -1.05
C11orf54-213ENST00000533585 PAXIP1Q6ZW49 1069 aaPredicted RBP8.4□□□□□ -1.06
C11orf54-213ENST00000533585 BBXQ8WY36 941 aaPredicted RBP8.4□□□□□ -1.06
C11orf54-213ENST00000533585 RANGAP1P46060 587 aaPredicted RBP8.39□□□□□ -1.07
C11orf54-213ENST00000533585 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
C11orf54-213ENST00000533585 TMEM132AQ24JP5 1023 aa8.38□□□□□ -1.07
C11orf54-213ENST00000533585 NBR1Q14596 966 aa8.36□□□□□ -1.07
C11orf54-213ENST00000533585 C14orf37Q86TY3 774 aa8.36□□□□□ -1.07
C11orf54-213ENST00000533585 MSH5O43196 834 aa8.34□□□□□ -1.07
C11orf54-213ENST00000533585 MAPK8IP2Q13387 824 aaPredicted RBP8.34□□□□□ -1.07
C11orf54-213ENST00000533585 PKD2Q13563 968 aa8.34□□□□□ -1.07
C11orf54-213ENST00000533585 VASPP50552 380 aaPredicted RBP8.33□□□□□ -1.08
C11orf54-213ENST00000533585 TSHZ2Q9NRE2 1034 aa8.28□□□□□ -1.08
C11orf54-213ENST00000533585 IFNLR1Q8IU57 520 aaPredicted RBP8.27□□□□□ -1.09
C11orf54-213ENST00000533585 SPRYD3Q8NCJ5 442 aa8.26□□□□□ -1.09
C11orf54-213ENST00000533585 NPM1P06748 294 aaKnown RBP eCLIP8.24□□□□□ -1.09
C11orf54-213ENST00000533585 PODXL2Q9NZ53 605 aa8.24□□□□□ -1.09
C11orf54-213ENST00000533585 ATF5Q9Y2D1 282 aaPredicted RBP8.21□□□□□ -1.1
C11orf54-213ENST00000533585 HOXD11P31277 338 aaPredicted RBP8.2□□□□□ -1.1
C11orf54-213ENST00000533585 SPDYE4A6NLX3 237 aa8.19□□□□□ -1.1
C11orf54-213ENST00000533585 ECM2O94769 699 aaPredicted RBP8.17□□□□□ -1.1
C11orf54-213ENST00000533585 DNAJC5Q9H3Z4 198 aa8.12□□□□□ -1.11
C11orf54-213ENST00000533585 SUPT5HO00267 1087 aaKnown RBP8.11□□□□□ -1.11
C11orf54-213ENST00000533585 PROM2Q8N271 834 aa8.11□□□□□ -1.11
C11orf54-213ENST00000533585 SPOCK2Q92563 424 aa8.06□□□□□ -1.12
C11orf54-213ENST00000533585 SAMD1Q6SPF0 538 aaPredicted RBP8.05□□□□□ -1.12
C11orf54-213ENST00000533585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.04□□□□□ -1.12
C11orf54-213ENST00000533585 RGL2O15211 777 aa8.04□□□□□ -1.12
C11orf54-213ENST00000533585 HNRNPUL2Q1KMD3 747 aaKnown RBP8.04□□□□□ -1.12
C11orf54-213ENST00000533585 KLHL34Q8N239 644 aa8.04□□□□□ -1.12
C11orf54-213ENST00000533585 NPM2Q86SE8 214 aaKnown RBP8.03□□□□□ -1.12
C11orf54-213ENST00000533585 DMRT2Q9Y5R5 561 aa8.03□□□□□ -1.12
C11orf54-213ENST00000533585 CHGAP10645 457 aaKnown RBP8.01□□□□□ -1.13
C11orf54-213ENST00000533585 ZNF219Q9P2Y4 722 aaPredicted RBP7.99□□□□□ -1.13
C11orf54-213ENST00000533585 TRIM26Q12899 539 aaPredicted RBP7.95□□□□□ -1.14
C11orf54-213ENST00000533585 UBTFP17480 764 aaKnown RBP7.94□□□□□ -1.14
C11orf54-213ENST00000533585 MKRN4PQ13434 485 aaPredicted RBP7.89□□□□□ -1.15
C11orf54-213ENST00000533585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.89□□□□□ -1.15
C11orf54-213ENST00000533585 BRPF1P55201 1214 aaPredicted RBP7.87□□□□□ -1.15
C11orf54-213ENST00000533585 HRCP23327 699 aa7.84□□□□□ -1.15
C11orf54-213ENST00000533585 HS6ST3Q8IZP7 471 aa7.84□□□□□ -1.15
C11orf54-213ENST00000533585 CIZ1Q9ULV3 898 aaPredicted RBP7.81□□□□□ -1.16
C11orf54-213ENST00000533585 U3KPZ7 1027 aaPredicted RBP7.81□□□□□ -1.16
C11orf54-213ENST00000533585 NEUROD2Q15784 382 aa7.8□□□□□ -1.16
C11orf54-213ENST00000533585 LMOD2Q6P5Q4 547 aa7.8□□□□□ -1.16
C11orf54-213ENST00000533585 PLCD3Q8N3E9 789 aa7.79□□□□□ -1.16
C11orf54-213ENST00000533585 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.77□□□□□ -1.17
C11orf54-213ENST00000533585 P3H3Q8IVL6 736 aa7.77□□□□□ -1.17
C11orf54-213ENST00000533585 APLP2Q06481 763 aa7.75□□□□□ -1.17
C11orf54-213ENST00000533585 ZMYND15Q9H091 742 aa7.75□□□□□ -1.17
C11orf54-213ENST00000533585 STAG3Q9UJ98 1225 aa7.75□□□□□ -1.17
C11orf54-213ENST00000533585 RSPH6AQ9H0K4 717 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms