RNA–Protein interactions for RNA: ENST00000506600.1

CCT5-205, Transcript of chaperonin containing TCP1 subunit 5, humanhuman

TSL 2 BASIC

Gene CCT5, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT5-205ENST00000506600 DDX3XO00571 662 aaKnown RBP eCLIP21.53■■□□□ 1.043e-38■■■■□ 22.6
CCT5-205ENST00000506600 PABPC4Q13310 644 aaKnown RBP eCLIP21.78■■□□□ 1.085e-23■□□□□ 11
CCT5-205ENST00000506600 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.31■■□□□ 1.324e-18■□□□□ 8.9
CCT5-205ENST00000506600 ZNF622Q969S3 477 aaKnown RBP eCLIP22.01■■□□□ 1.111e-15■□□□□ 9.9
CCT5-205ENST00000506600 NOLC1Q14978 699 aaKnown RBP eCLIP22.98■■□□□ 1.273e-13■■■■□ 25.7
CCT5-205ENST00000506600 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.3■■□□□ 1.166e-13■□□□□ 10.1
CCT5-205ENST00000506600 SND1Q7KZF4 910 aaKnown RBP eCLIP21.48■■□□□ 1.034e-12■□□□□ 8.2
CCT5-205ENST00000506600 SRSF7Q16629 238 aaKnown RBP eCLIP17.09■□□□□ 0.337e-12■□□□□ 8.4
CCT5-205ENST00000506600 SF3B1O75533 1304 aaKnown RBP eCLIP20.5■□□□□ 0.873e-11■■■■■ 61.7
CCT5-205ENST00000506600 RBM22Q9NW64 420 aaKnown RBP eCLIP20.05■□□□□ 0.84e-10■■■■■ 53.8
CCT5-205ENST00000506600 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.84■□□□□ 0.776e-10■■□□□ 13.2
CCT5-205ENST00000506600 YBX3P16989 372 aaKnown RBP eCLIP20.63■□□□□ 0.892e-9■□□□□ 9.4
CCT5-205ENST00000506600 FXR2P51116 673 aaKnown RBP eCLIP22.22■■□□□ 1.154e-9■■■□□ 16.5
CCT5-205ENST00000506600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.07■■□□□ 1.924e-9■■■■□ 19.4
CCT5-205ENST00000506600 GPKOWQ92917 476 aaPredicted RBP eCLIP22.39■■□□□ 1.175e-9■■■■□ 24.1
CCT5-205ENST00000506600 HNRNPMP52272 730 aaKnown RBP eCLIP27.55■■■□□ 26e-9■■■■□ 21.8
CCT5-205ENST00000506600 FMR1Q06787 632 aaKnown RBP eCLIP22.5■■□□□ 1.196e-9■■■■□ 26.2
CCT5-205ENST00000506600 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.06■□□□□ 0.646e-9■□□□□ 9.2
CCT5-205ENST00000506600 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.45■■□□□ 1.026e-9■□□□□ 11.1
CCT5-205ENST00000506600 EFTUD2Q15029 972 aaKnown RBP eCLIP20.53■□□□□ 0.881e-8■■■■■ 35.1
CCT5-205ENST00000506600 HLTFQ14527 1009 aaKnown RBP eCLIP21.29■■□□□ 12e-8■■□□□ 12.4
CCT5-205ENST00000506600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.22■■□□□ 1.474e-8■□□□□ 10.7
CCT5-205ENST00000506600 RPS3P23396 243 aaKnown RBP eCLIP19.59■□□□□ 0.735e-8■■■□□ 17.1
CCT5-205ENST00000506600 LSM11P83369 360 aaKnown RBP eCLIP18.48■□□□□ 0.556e-8■■□□□ 11.8
CCT5-205ENST00000506600 AQRO60306 1485 aaKnown RBP eCLIP29.44■■■□□ 2.37e-8■■■■□ 23.4
CCT5-205ENST00000506600 KHSRPQ92945 711 aaKnown RBP eCLIP20.63■□□□□ 0.897e-8■■□□□ 14
CCT5-205ENST00000506600 TRA2AQ13595 282 aaKnown RBP eCLIP17.62■□□□□ 0.417e-8■□□□□ 8.4
CCT5-205ENST00000506600 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.2■□□□□ 0.52e-7■■□□□ 11.9
CCT5-205ENST00000506600 NIPBLQ6KC79 2804 aaeCLIP13.82□□□□□ -0.22e-7■■■■□ 20.4
CCT5-205ENST00000506600 RBM15Q96T37 977 aaKnown RBP eCLIP20.82■□□□□ 0.923e-7■□□□□ 8.1
CCT5-205ENST00000506600 G3BP1Q13283 466 aaKnown RBP eCLIP23.94■■□□□ 1.423e-7■■■□□ 15.2
CCT5-205ENST00000506600 LARP4Q71RC2 724 aaKnown RBP eCLIP19.76■□□□□ 0.757e-7■■□□□ 14.1
CCT5-205ENST00000506600 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.57■□□□□ 0.727e-7■■■□□ 16
CCT5-205ENST00000506600 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.89□□□□□ -0.039e-7■■■□□ 18.4
CCT5-205ENST00000506600 SUB1P53999 127 aaKnown RBP eCLIP16.01■□□□□ 0.151e-6■■■■■ 99.2
CCT5-205ENST00000506600 PPIGQ13427 754 aaKnown RBP eCLIP19.1■□□□□ 0.651e-6■□□□□ 9.6
CCT5-205ENST00000506600 SF3B4Q15427 424 aaKnown RBP eCLIP17.98■□□□□ 0.472e-6■■□□□ 13.7
CCT5-205ENST00000506600 AARSP49588 968 aaKnown RBP eCLIP21.66■■□□□ 1.062e-6■□□□□ 8.1
CCT5-205ENST00000506600 HNRNPLP14866 589 aaKnown RBP eCLIP19.8■□□□□ 0.762e-6■■□□□ 12
CCT5-205ENST00000506600 SF3A3Q12874 501 aaKnown RBP eCLIP20.5■□□□□ 0.872e-6■□□□□ 9.2
CCT5-205ENST00000506600 CPSF6Q16630 551 aaKnown RBP eCLIP19.27■□□□□ 0.673e-6■□□□□ 9.1
CCT5-205ENST00000506600 TIA1P31483 386 aaKnown RBP eCLIP19.08■□□□□ 0.643e-6■■■□□ 18.8
CCT5-205ENST00000506600 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.88■■□□□ 1.254e-6■□□□□ 8.1
CCT5-205ENST00000506600 FUSP35637 526 aaKnown RBP eCLIP12.55□□□□□ -0.44e-6■■■□□ 18.3
CCT5-205ENST00000506600 PUM1Q14671 1186 aaKnown RBP eCLIP18.77■□□□□ 0.65e-6■□□□□ 9.2
CCT5-205ENST00000506600 FXR1P51114 621 aaKnown RBP eCLIP22.19■■□□□ 1.145e-6■■■□□ 14.9
CCT5-205ENST00000506600 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.21■□□□□ 0.995e-6■□□□□ 10.2
CCT5-205ENST00000506600 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.63■□□□□ 0.737e-6■■■■■ 27.5
Retrieved 48 of 48 RNA–protein pairs in 30.7 ms