RNA–Protein interactions for RNA: YMR172C-A

YMR172C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YMR172C-A, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR172C-AYMR172C-A YLR358CO13565 187 aa3.28□□□□□ -1.88
YMR172C-AYMR172C-A SPS1P08458 490 aa3.28□□□□□ -1.88
YMR172C-AYMR172C-A NEM1P38757 446 aa3.28□□□□□ -1.88
YMR172C-AYMR172C-A CIC1P38779 376 aaKnown RBP3.28□□□□□ -1.88
YMR172C-AYMR172C-A XKS1P42826 600 aa3.28□□□□□ -1.88
YMR172C-AYMR172C-A SAM37P50110 327 aa3.28□□□□□ -1.88
YMR172C-AYMR172C-A TAD3Q9URQ3 322 aa3.28□□□□□ -1.88
YMR172C-AYMR172C-A TUB2P02557 457 aaKnown RBP3.27□□□□□ -1.89
YMR172C-AYMR172C-A SQT1P35184 431 aa3.27□□□□□ -1.89
YMR172C-AYMR172C-A YJL045WP47052 634 aa3.27□□□□□ -1.89
YMR172C-AYMR172C-A SPT20P50875 604 aa3.27□□□□□ -1.89
YMR172C-AYMR172C-A RSA3Q05942 220 aaKnown RBP3.27□□□□□ -1.89
YMR172C-AYMR172C-A MNL2Q12205 849 aa3.27□□□□□ -1.89
YMR172C-AYMR172C-A SAM35P14693 329 aa3.26□□□□□ -1.89
YMR172C-AYMR172C-A MSH3P25336 1018 aa3.26□□□□□ -1.89
YMR172C-AYMR172C-A ABZ1P37254 787 aaPredicted RBP3.26□□□□□ -1.89
YMR172C-AYMR172C-A SHM2P37291 469 aaKnown RBP3.26□□□□□ -1.89
YMR172C-AYMR172C-A CLU1Q03690 1277 aaKnown RBP3.26□□□□□ -1.89
YMR172C-AYMR172C-A UTP5Q04177 643 aaKnown RBP3.26□□□□□ -1.89
YMR172C-AYMR172C-A YCS4Q06156 1176 aa3.26□□□□□ -1.89
YMR172C-AYMR172C-A RLF2Q12495 606 aa3.26□□□□□ -1.89
YMR172C-AYMR172C-A SRO9P25567 434 aaKnown RBP3.25□□□□□ -1.89
YMR172C-AYMR172C-A RSB1Q08417 382 aa3.25□□□□□ -1.89
YMR172C-AYMR172C-A PNS1Q12412 539 aa3.25□□□□□ -1.89
YMR172C-AYMR172C-A COQ4O13525 335 aa3.24□□□□□ -1.89
YMR172C-AYMR172C-A CTS1P29029 562 aa3.24□□□□□ -1.89
YMR172C-AYMR172C-A CCZ1P38273 704 aa3.24□□□□□ -1.89
YMR172C-AYMR172C-A MPT5P39016 859 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89not detected
YMR172C-AYMR172C-A YBL113CQ7M4S9 792 aa3.24□□□□□ -1.89
YMR172C-AYMR172C-A FRT1Q99332 602 aa3.24□□□□□ -1.89
YMR172C-AYMR172C-A SCP160P06105 1222 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
YMR172C-AYMR172C-A KAR2P16474 682 aaKnown RBP3.23□□□□□ -1.89
YMR172C-AYMR172C-A VMA4P22203 233 aaKnown RBP3.23□□□□□ -1.89
YMR172C-AYMR172C-A QNS1P38795 714 aaKnown RBP3.23□□□□□ -1.89
YMR172C-AYMR172C-A ERP5P38819 212 aa3.23□□□□□ -1.89
YMR172C-AYMR172C-A SGD1Q06132 899 aa3.23□□□□□ -1.89
YMR172C-AYMR172C-A RSC58Q07979 502 aa3.23□□□□□ -1.89
YMR172C-AYMR172C-A TRL1P09880 827 aaKnown RBP3.22□□□□□ -1.89
YMR172C-AYMR172C-A YSC84P32793 468 aa3.22□□□□□ -1.89
YMR172C-AYMR172C-A VPS53P47061 822 aa3.22□□□□□ -1.89
YMR172C-AYMR172C-A ENV11P53246 860 aa3.22□□□□□ -1.89
YMR172C-AYMR172C-A NOG1Q02892 647 aaKnown RBP3.22□□□□□ -1.89
YMR172C-AYMR172C-A ROT1Q03691 256 aa3.22□□□□□ -1.89
YMR172C-AYMR172C-A DAL4Q04895 635 aa3.22□□□□□ -1.89
YMR172C-AYMR172C-A NUT2Q06213 157 aa3.22□□□□□ -1.89
YMR172C-AYMR172C-A CYC1P00044 109 aaPredicted RBP3.21□□□□□ -1.9
YMR172C-AYMR172C-A DED1P06634 604 aaKnown RBP3.21□□□□□ -1.9
YMR172C-AYMR172C-A SSA1P10591 642 aaKnown RBP3.21□□□□□ -1.9
YMR172C-AYMR172C-A PRE10P21242 288 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
YMR172C-AYMR172C-A PUF4P25339 888 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
YMR172C-AYMR172C-A CDC3P32457 520 aaKnown RBP3.21□□□□□ -1.9
YMR172C-AYMR172C-A PRP40P33203 583 aaKnown RBP3.21□□□□□ -1.9
YMR172C-AYMR172C-A YPT53P36019 220 aa3.21□□□□□ -1.9
YMR172C-AYMR172C-A TAT2P38967 592 aa3.21□□□□□ -1.9
YMR172C-AYMR172C-A GPI13Q07830 1017 aa3.21□□□□□ -1.9
YMR172C-AYMR172C-A HAT1Q12341 374 aa3.21□□□□□ -1.9
YMR172C-AYMR172C-A GCD6P32501 712 aaKnown RBP3.2□□□□□ -1.9
YMR172C-AYMR172C-A UGA4P32837 571 aa3.2□□□□□ -1.9
YMR172C-AYMR172C-A ADD66P36040 267 aa3.2□□□□□ -1.9
YMR172C-AYMR172C-A PEX28P38848 579 aa3.2□□□□□ -1.9
YMR172C-AYMR172C-A LAM1P38851 1228 aa3.2□□□□□ -1.9
YMR172C-AYMR172C-A GPB2P39717 880 aa3.2□□□□□ -1.9
YMR172C-AYMR172C-A MDJ2P42834 146 aa3.2□□□□□ -1.9
YMR172C-AYMR172C-A GCN5Q03330 439 aa3.2□□□□□ -1.9
YMR172C-AYMR172C-A MEF2P39677 819 aa3.19□□□□□ -1.9
YMR172C-AYMR172C-A HNT2P49775 206 aa3.19□□□□□ -1.9
YMR172C-AYMR172C-A ULP1Q02724 621 aa3.19□□□□□ -1.9
YMR172C-AYMR172C-A OXR1Q08952 273 aa3.19□□□□□ -1.9
YMR172C-AYMR172C-A PTC5Q12511 572 aa3.19□□□□□ -1.9
YMR172C-AYMR172C-A KIP1P28742 1111 aa3.18□□□□□ -1.9
YMR172C-AYMR172C-A TRM2P33753 639 aa3.18□□□□□ -1.9
YMR172C-AYMR172C-A SEC26P41810 973 aaKnown RBP3.18□□□□□ -1.9
YMR172C-AYMR172C-A TNA1P53322 534 aa3.18□□□□□ -1.9
YMR172C-AYMR172C-A RKM2Q03942 479 aa3.18□□□□□ -1.9
YMR172C-AYMR172C-A RSM24Q03976 319 aa3.18□□□□□ -1.9
YMR172C-AYMR172C-A HOS3Q02959 697 aaKnown RBP3.17□□□□□ -1.9
YMR172C-AYMR172C-A EST2Q06163 884 aa3.17□□□□□ -1.9
YMR172C-AYMR172C-A RCL1Q08096 367 aaPredicted RBP3.17□□□□□ -1.9
YMR172C-AYMR172C-A CMP2P14747 604 aa3.16□□□□□ -1.9
YMR172C-AYMR172C-A THI12P42883 340 aa3.16□□□□□ -1.9
YMR172C-AYMR172C-A THI5P43534 340 aa3.16□□□□□ -1.9
YMR172C-AYMR172C-A THI11P47183 340 aa3.16□□□□□ -1.9
YMR172C-AYMR172C-A MCM6P53091 1017 aaKnown RBP3.16□□□□□ -1.9
YMR172C-AYMR172C-A YDR132CQ03900 495 aa3.16□□□□□ -1.9
YMR172C-AYMR172C-A TMA10Q06177 86 aa3.16□□□□□ -1.9
YMR172C-AYMR172C-A THI13Q07748 340 aa3.16□□□□□ -1.9
YMR172C-AYMR172C-A HCM1P25364 564 aa3.15□□□□□ -1.91
YMR172C-AYMR172C-A VPS35P34110 944 aa3.15□□□□□ -1.91
YMR172C-AYMR172C-A RFC5P38251 354 aa3.15□□□□□ -1.91
YMR172C-AYMR172C-A YHL050CP38721 697 aa3.15□□□□□ -1.91
YMR172C-AYMR172C-A YHR219WP38900 624 aa3.15□□□□□ -1.91
YMR172C-AYMR172C-A MSE1P48525 536 aa3.15□□□□□ -1.91
YMR172C-AYMR172C-A YGL140CP53120 1219 aa3.15□□□□□ -1.91
YMR172C-AYMR172C-A RXT3Q07458 294 aa3.15□□□□□ -1.91
YMR172C-AYMR172C-A SPO21Q12411 609 aa3.15□□□□□ -1.91
YMR172C-AYMR172C-A GAL10P04397 699 aa3.14□□□□□ -1.91
YMR172C-AYMR172C-A ALG3P38179 458 aa3.14□□□□□ -1.91
YMR172C-AYMR172C-A PIK1P39104 1066 aa3.14□□□□□ -1.91
YMR172C-AYMR172C-A GTF1P53260 183 aaPredicted RBP3.14□□□□□ -1.91
YMR172C-AYMR172C-A PBP1P53297 722 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 93.1 ms