Protein–RNA interactions for Protein: P22203

VMA4, V-type proton ATPase subunit E, yeastyeast

Known RBP Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA4P22203 NSR1YGR159C 1245 nt21.6■■□□□ 1.05
VMA4P22203 YML009W-BYML009W-B 477 nt21.56■■□□□ 1.04
VMA4P22203 NOP1YDL014W 984 nt21.02■□□□□ 0.96
VMA4P22203 YKL036CYKL036C 393 nt19.32■□□□□ 0.68
VMA4P22203 MDJ1YFL016C 1536 nt19.12■□□□□ 0.65
VMA4P22203 Q0297Q0297 156 nt18.41■□□□□ 0.54
VMA4P22203 SRX1YKL086W 384 nt18.38■□□□□ 0.53
VMA4P22203 YJL027CYJL027C 417 nt17.98■□□□□ 0.47
VMA4P22203 SCS3YGL126W 1143 nt17.53■□□□□ 0.4
VMA4P22203 YCR051WYCR051W 669 nt17.34■□□□□ 0.37
VMA4P22203 DBP2YNL112W 1641 nt16.98■□□□□ 0.31
VMA4P22203 YOL085CYOL085C 342 nt16.73■□□□□ 0.27
VMA4P22203 TRN1tP(UGG)A 72 nt16.65■□□□□ 0.26
VMA4P22203 SUF9tP(UGG)F 72 nt16.65■□□□□ 0.26
VMA4P22203 SUF8tP(UGG)H 72 nt16.65■□□□□ 0.26
VMA4P22203 tP(UGG)LtP(UGG)L 72 nt16.65■□□□□ 0.26
VMA4P22203 SUF7tP(UGG)M 72 nt16.65■□□□□ 0.26
VMA4P22203 tP(UGG)N1tP(UGG)N1 72 nt16.65■□□□□ 0.26
VMA4P22203 tP(UGG)N2tP(UGG)N2 72 nt16.65■□□□□ 0.26
VMA4P22203 tP(UGG)O1tP(UGG)O1 72 nt16.65■□□□□ 0.26
VMA4P22203 SUF11tP(UGG)O2 72 nt16.65■□□□□ 0.26
VMA4P22203 RPP1BYDL130W 321 nt16.49■□□□□ 0.23
VMA4P22203 YBR190WYBR190W 312 nt16.42■□□□□ 0.22
VMA4P22203 PKP1YIL042C 1185 nt16.4■□□□□ 0.22
VMA4P22203 CCC1YLR220W 969 nt16.37■□□□□ 0.21
VMA4P22203 RTC3YHR087W 336 nt15.94■□□□□ 0.14
VMA4P22203 RVS167YDR388W 1449 nt15.92■□□□□ 0.14
VMA4P22203 SCJ1YMR214W 1134 nt15.8■□□□□ 0.12
VMA4P22203 PET122YER153C 765 nt15.72■□□□□ 0.11
VMA4P22203 tP(UGG)O3tP(UGG)O3 72 nt15.7■□□□□ 0.1
VMA4P22203 ATS1YAL020C 1002 nt15.68■□□□□ 0.1
VMA4P22203 SCR1SCR1 522 nt15.56■□□□□ 0.08
VMA4P22203 SHR5YOL110W 714 nt15.37■□□□□ 0.05
VMA4P22203 RRN5YLR141W 1092 nt15.26■□□□□ 0.03
VMA4P22203 YDJ1YNL064C 1230 nt15.24■□□□□ 0.03
VMA4P22203 SSA3YBL075C 1950 nt15.21■□□□□ 0.03
VMA4P22203 YER088W-BYER088W-B 147 nt14.97□□□□□ -0.01
VMA4P22203 PUT4YOR348C 1884 nt14.95□□□□□ -0.02
VMA4P22203 URN1YPR152C 1398 nt14.94□□□□□ -0.02
VMA4P22203 RSB1YOR049C 1065 nt14.89□□□□□ -0.03
VMA4P22203 Q0182Q0182 405 nt14.87□□□□□ -0.03
VMA4P22203 DEP1YAL013W 1218 nt14.85□□□□□ -0.03
VMA4P22203 GAR1YHR089C 618 nt14.81□□□□□ -0.04
VMA4P22203 OPI9YLR338W 858 nt14.8□□□□□ -0.04
VMA4P22203 RPN10YHR200W 807 nt14.74□□□□□ -0.05
VMA4P22203 YNL208WYNL208W 600 nt14.7□□□□□ -0.06
VMA4P22203 SAH1YER043C 1350 nt14.66□□□□□ -0.06
VMA4P22203 ARE1YCR048W 1833 nt14.66□□□□□ -0.06
VMA4P22203 PST2YDR032C 597 nt14.57□□□□□ -0.08
VMA4P22203 POA1YBR022W 534 nt14.41□□□□□ -0.1
VMA4P22203 YHR049C-AYHR049C-A 297 nt14.4□□□□□ -0.1
VMA4P22203 TIR1YER011W 765 nt14.37□□□□□ -0.11
VMA4P22203 PUN1YLR414C 792 nt14.35□□□□□ -0.11
VMA4P22203 YJR018WYJR018W 363 nt14.27□□□□□ -0.13
VMA4P22203 SSA1YAL005C 1929 nt14.21□□□□□ -0.14
VMA4P22203 PTC2YER089C 1395 nt14.15□□□□□ -0.14
VMA4P22203 BSC6YOL137W 1494 nt14.12□□□□□ -0.15
VMA4P22203 YJR120WYJR120W 351 nt14.06□□□□□ -0.16
VMA4P22203 MOT3YMR070W 1473 nt14.05□□□□□ -0.16
VMA4P22203 BUD23YCR047C 828 nt14.03□□□□□ -0.16
VMA4P22203 NAB2YGL122C 1578 nt14.02□□□□□ -0.16
VMA4P22203 RPP2BYDR382W 333 nt13.95□□□□□ -0.18
VMA4P22203 SHU1YHL006C 453 nt13.94□□□□□ -0.18
VMA4P22203 SRB2YHR041C 633 nt13.93□□□□□ -0.18
VMA4P22203 YKL097CYKL097C 411 nt13.9□□□□□ -0.18
VMA4P22203 DAL1YIR027C 1383 nt13.82□□□□□ -0.2
VMA4P22203 INM2YDR287W 879 nt13.8□□□□□ -0.2
VMA4P22203 FIS1YIL065C 468 nt13.8□□□□□ -0.2
VMA4P22203 SPT5YML010W 3192 nt13.75□□□□□ -0.21
VMA4P22203 WWM1YFL010C 636 nt13.7□□□□□ -0.22
VMA4P22203 BDH2YAL061W 1254 nt13.7□□□□□ -0.22
VMA4P22203 YAL037C-BYAL037C-B 975 nt13.69□□□□□ -0.22
VMA4P22203 PHO4YFR034C 939 nt13.66□□□□□ -0.22
VMA4P22203 FPR4YLR449W 1179 nt13.66□□□□□ -0.22
VMA4P22203 YGR021WYGR021W 873 nt13.65□□□□□ -0.22
VMA4P22203 YBL100CYBL100C 315 nt13.62□□□□□ -0.23
VMA4P22203 SSA4YER103W 1929 nt13.61□□□□□ -0.23
VMA4P22203 HOM6YJR139C 1080 nt13.6□□□□□ -0.23
VMA4P22203 LSM3YLR438C-A 270 nt13.55□□□□□ -0.24
VMA4P22203 YFL021C-AYFL021C-A 855 nt13.53□□□□□ -0.24
VMA4P22203 FUN26YAL022C 1554 nt13.46□□□□□ -0.25
VMA4P22203 YPS1YLR120C 1710 nt13.46□□□□□ -0.25
VMA4P22203 MNP1YGL068W 585 nt13.44□□□□□ -0.26
VMA4P22203 TRM9YML014W 840 nt13.44□□□□□ -0.26
VMA4P22203 RKM5YLR137W 1104 nt13.38□□□□□ -0.27
VMA4P22203 YOR139CYOR139C 393 nt13.38□□□□□ -0.27
VMA4P22203 YDR095CYDR095C 411 nt13.36□□□□□ -0.27
VMA4P22203 CCT6YDR188W 1641 nt13.35□□□□□ -0.27
VMA4P22203 MEP2YNL142W 1500 nt13.3□□□□□ -0.28
VMA4P22203 YOL037CYOL037C 354 nt13.28□□□□□ -0.28
VMA4P22203 ALF1YNL148C 765 nt13.25□□□□□ -0.29
VMA4P22203 NPL3YDR432W 1245 nt13.24□□□□□ -0.29
VMA4P22203 YHR165W-AYHR165W-A 312 nt13.23□□□□□ -0.29
VMA4P22203 SUF2tP(AGG)C 72 nt13.21□□□□□ -0.29
VMA4P22203 SUF10tP(AGG)N 72 nt13.21□□□□□ -0.29
VMA4P22203 SIS1YNL007C 1059 nt13.14□□□□□ -0.31
VMA4P22203 BDF1YLR399C 2061 nt13.12□□□□□ -0.31
VMA4P22203 RPP2AYOL039W 321 nt13.1□□□□□ -0.31
VMA4P22203 PTP1YDL230W 1008 nt13.06□□□□□ -0.32
VMA4P22203 DCW1YKL046C 1350 nt13.05□□□□□ -0.32
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms