Protein–RNA interactions for Protein: P06634

DED1, ATP-dependent RNA helicase DED1, yeastyeast

Known RBP Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DED1P06634 YML009W-BYML009W-B 477 nt22.6■■□□□ 1.21
DED1P06634 NSR1YGR159C 1245 nt22.27■■□□□ 1.16
DED1P06634 NOP1YDL014W 984 nt22■■□□□ 1.11
DED1P06634 YKL036CYKL036C 393 nt20.54■□□□□ 0.88
DED1P06634 MDJ1YFL016C 1536 nt19.63■□□□□ 0.73
DED1P06634 Q0297Q0297 156 nt19.38■□□□□ 0.69
DED1P06634 SRX1YKL086W 384 nt19.27■□□□□ 0.68
DED1P06634 YJL027CYJL027C 417 nt19.21■□□□□ 0.67
DED1P06634 SCS3YGL126W 1143 nt18.82■□□□□ 0.6
DED1P06634 YCR051WYCR051W 669 nt18.31■□□□□ 0.52
DED1P06634 YOL085CYOL085C 342 nt17.82■□□□□ 0.44
DED1P06634 PKP1YIL042C 1185 nt17.55■□□□□ 0.4
DED1P06634 DBP2YNL112W 1641 nt17.47■□□□□ 0.39
DED1P06634 RPP1BYDL130W 321 nt17.38■□□□□ 0.37
DED1P06634 TRN1tP(UGG)A 72 nt17.31■□□□□ 0.36
DED1P06634 SUF9tP(UGG)F 72 nt17.31■□□□□ 0.36
DED1P06634 SUF8tP(UGG)H 72 nt17.31■□□□□ 0.36
DED1P06634 tP(UGG)LtP(UGG)L 72 nt17.31■□□□□ 0.36
DED1P06634 SUF7tP(UGG)M 72 nt17.31■□□□□ 0.36
DED1P06634 tP(UGG)N1tP(UGG)N1 72 nt17.31■□□□□ 0.36
DED1P06634 tP(UGG)N2tP(UGG)N2 72 nt17.31■□□□□ 0.36
DED1P06634 tP(UGG)O1tP(UGG)O1 72 nt17.31■□□□□ 0.36
DED1P06634 SUF11tP(UGG)O2 72 nt17.31■□□□□ 0.36
DED1P06634 CCC1YLR220W 969 nt17.16■□□□□ 0.34
DED1P06634 ATS1YAL020C 1002 nt16.89■□□□□ 0.29
DED1P06634 SCJ1YMR214W 1134 nt16.87■□□□□ 0.29
DED1P06634 YBR190WYBR190W 312 nt16.63■□□□□ 0.25
DED1P06634 PET122YER153C 765 nt16.62■□□□□ 0.25
DED1P06634 tP(UGG)O3tP(UGG)O3 72 nt16.46■□□□□ 0.23
DED1P06634 SCR1SCR1 522 nt16.42■□□□□ 0.22
DED1P06634 RVS167YDR388W 1449 nt16.37■□□□□ 0.21
DED1P06634 RTC3YHR087W 336 nt16.28■□□□□ 0.2
DED1P06634 RRN5YLR141W 1092 nt16.17■□□□□ 0.18
DED1P06634 YDJ1YNL064C 1230 nt15.9■□□□□ 0.14
DED1P06634 SHR5YOL110W 714 nt15.89■□□□□ 0.13
DED1P06634 RSB1YOR049C 1065 nt15.87■□□□□ 0.13
DED1P06634 YER088W-BYER088W-B 147 nt15.84■□□□□ 0.13
DED1P06634 PST2YDR032C 597 nt15.62■□□□□ 0.09
DED1P06634 GAR1YHR089C 618 nt15.54■□□□□ 0.08
DED1P06634 DEP1YAL013W 1218 nt15.42■□□□□ 0.06
DED1P06634 URN1YPR152C 1398 nt15.34■□□□□ 0.05
DED1P06634 YNL208WYNL208W 600 nt15.15■□□□□ 0.02
DED1P06634 RPN10YHR200W 807 nt15.09■□□□□ 0.01
DED1P06634 YKL097CYKL097C 411 nt15.08■□□□□ 0
DED1P06634 OPI9YLR338W 858 nt15.06■□□□□ 0
DED1P06634 TIR1YER011W 765 nt14.99□□□□□ -0.01
DED1P06634 PUT4YOR348C 1884 nt14.97□□□□□ -0.01
DED1P06634 SHU1YHL006C 453 nt14.95□□□□□ -0.02
DED1P06634 SAH1YER043C 1350 nt14.94□□□□□ -0.02
DED1P06634 SSA1YAL005C 1929 nt14.8□□□□□ -0.04
DED1P06634 ARE1YCR048W 1833 nt14.78□□□□□ -0.04
DED1P06634 YAL037C-BYAL037C-B 975 nt14.68□□□□□ -0.06
DED1P06634 SRB2YHR041C 633 nt14.66□□□□□ -0.06
DED1P06634 YJR018WYJR018W 363 nt14.64□□□□□ -0.07
DED1P06634 PUN1YLR414C 792 nt14.6□□□□□ -0.07
DED1P06634 YHR049C-AYHR049C-A 297 nt14.57□□□□□ -0.08
DED1P06634 POA1YBR022W 534 nt14.54□□□□□ -0.08
DED1P06634 YJR120WYJR120W 351 nt14.52□□□□□ -0.09
DED1P06634 YOR139CYOR139C 393 nt14.49□□□□□ -0.09
DED1P06634 PTC2YER089C 1395 nt14.43□□□□□ -0.1
DED1P06634 WWM1YFL010C 636 nt14.4□□□□□ -0.1
DED1P06634 RPP2BYDR382W 333 nt14.35□□□□□ -0.11
DED1P06634 HOM6YJR139C 1080 nt14.32□□□□□ -0.12
DED1P06634 MNP1YGL068W 585 nt14.3□□□□□ -0.12
DED1P06634 YGR021WYGR021W 873 nt14.3□□□□□ -0.12
DED1P06634 NPL3YDR432W 1245 nt14.26□□□□□ -0.13
DED1P06634 BUD23YCR047C 828 nt14.25□□□□□ -0.13
DED1P06634 SSA3YBL075C 1950 nt14.18□□□□□ -0.14
DED1P06634 BSC6YOL137W 1494 nt14.18□□□□□ -0.14
DED1P06634 NAB2YGL122C 1578 nt14.17□□□□□ -0.14
DED1P06634 BDH2YAL061W 1254 nt14.14□□□□□ -0.15
DED1P06634 YFL021C-AYFL021C-A 855 nt14.11□□□□□ -0.15
DED1P06634 RKM5YLR137W 1104 nt14.1□□□□□ -0.15
DED1P06634 INM2YDR287W 879 nt14.07□□□□□ -0.16
DED1P06634 YOL037CYOL037C 354 nt14.07□□□□□ -0.16
DED1P06634 FIS1YIL065C 468 nt14.03□□□□□ -0.16
DED1P06634 FPR4YLR449W 1179 nt14.03□□□□□ -0.16
DED1P06634 DAL1YIR027C 1383 nt14.03□□□□□ -0.16
DED1P06634 LSM3YLR438C-A 270 nt13.98□□□□□ -0.17
DED1P06634 YBL100CYBL100C 315 nt13.98□□□□□ -0.17
DED1P06634 PHO4YFR034C 939 nt13.92□□□□□ -0.18
DED1P06634 tM(CAU)CtM(CAU)C 72 nt13.91□□□□□ -0.18
DED1P06634 IMT4tM(CAU)E 72 nt13.91□□□□□ -0.18
DED1P06634 IMT3tM(CAU)J3 72 nt13.91□□□□□ -0.18
DED1P06634 IMT1tM(CAU)O1 72 nt13.91□□□□□ -0.18
DED1P06634 IMT2tM(CAU)P 72 nt13.91□□□□□ -0.18
DED1P06634 FUN26YAL022C 1554 nt13.83□□□□□ -0.19
DED1P06634 TRM9YML014W 840 nt13.83□□□□□ -0.2
DED1P06634 YLR281CYLR281C 468 nt13.78□□□□□ -0.2
DED1P06634 Q0182Q0182 405 nt13.77□□□□□ -0.21
DED1P06634 PUS2YGL063W 1113 nt13.73□□□□□ -0.21
DED1P06634 WHI5YOR083W 888 nt13.72□□□□□ -0.21
DED1P06634 CCT6YDR188W 1641 nt13.68□□□□□ -0.22
DED1P06634 YPS1YLR120C 1710 nt13.56□□□□□ -0.24
DED1P06634 ALF1YNL148C 765 nt13.56□□□□□ -0.24
DED1P06634 YDR095CYDR095C 411 nt13.53□□□□□ -0.24
DED1P06634 YLR154C-GYLR154C-G 150 nt13.53□□□□□ -0.24
DED1P06634 YPR011CYPR011C 981 nt13.51□□□□□ -0.25
DED1P06634 MOT3YMR070W 1473 nt13.5□□□□□ -0.25
DED1P06634 SUF2tP(AGG)C 72 nt13.5□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms