Protein–RNA interactions for Protein: Q08096

RCL1, RNA 3'-terminal phosphate cyclase-like protein, yeastyeast

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCL1Q08096 YML009W-BYML009W-B 477 nt21.5■■□□□ 1.03
RCL1Q08096 NSR1YGR159C 1245 nt21.25■□□□□ 0.99
RCL1Q08096 NOP1YDL014W 984 nt20.91■□□□□ 0.94
RCL1Q08096 YKL036CYKL036C 393 nt19.42■□□□□ 0.7
RCL1Q08096 MDJ1YFL016C 1536 nt18.79■□□□□ 0.6
RCL1Q08096 Q0297Q0297 156 nt18.36■□□□□ 0.53
RCL1Q08096 SRX1YKL086W 384 nt18.3■□□□□ 0.52
RCL1Q08096 YJL027CYJL027C 417 nt18.15■□□□□ 0.5
RCL1Q08096 SCS3YGL126W 1143 nt17.74■□□□□ 0.43
RCL1Q08096 YCR051WYCR051W 669 nt17.38■□□□□ 0.37
RCL1Q08096 YOL085CYOL085C 342 nt16.84■□□□□ 0.29
RCL1Q08096 DBP2YNL112W 1641 nt16.69■□□□□ 0.26
RCL1Q08096 PKP1YIL042C 1185 nt16.59■□□□□ 0.25
RCL1Q08096 RPP1BYDL130W 321 nt16.48■□□□□ 0.23
RCL1Q08096 TRN1tP(UGG)A 72 nt16.48■□□□□ 0.23
RCL1Q08096 SUF9tP(UGG)F 72 nt16.48■□□□□ 0.23
RCL1Q08096 SUF8tP(UGG)H 72 nt16.48■□□□□ 0.23
RCL1Q08096 tP(UGG)LtP(UGG)L 72 nt16.48■□□□□ 0.23
RCL1Q08096 SUF7tP(UGG)M 72 nt16.48■□□□□ 0.23
RCL1Q08096 tP(UGG)N1tP(UGG)N1 72 nt16.48■□□□□ 0.23
RCL1Q08096 tP(UGG)N2tP(UGG)N2 72 nt16.48■□□□□ 0.23
RCL1Q08096 tP(UGG)O1tP(UGG)O1 72 nt16.48■□□□□ 0.23
RCL1Q08096 SUF11tP(UGG)O2 72 nt16.48■□□□□ 0.23
RCL1Q08096 CCC1YLR220W 969 nt16.33■□□□□ 0.2
RCL1Q08096 YBR190WYBR190W 312 nt15.97■□□□□ 0.15
RCL1Q08096 ATS1YAL020C 1002 nt15.91■□□□□ 0.14
RCL1Q08096 SCJ1YMR214W 1134 nt15.82■□□□□ 0.12
RCL1Q08096 PET122YER153C 765 nt15.75■□□□□ 0.11
RCL1Q08096 RVS167YDR388W 1449 nt15.66■□□□□ 0.1
RCL1Q08096 tP(UGG)O3tP(UGG)O3 72 nt15.64■□□□□ 0.09
RCL1Q08096 RTC3YHR087W 336 nt15.63■□□□□ 0.09
RCL1Q08096 SCR1SCR1 522 nt15.57■□□□□ 0.08
RCL1Q08096 RRN5YLR141W 1092 nt15.31■□□□□ 0.04
RCL1Q08096 SHR5YOL110W 714 nt15.16■□□□□ 0.02
RCL1Q08096 YDJ1YNL064C 1230 nt15.1■□□□□ 0.01
RCL1Q08096 YER088W-BYER088W-B 147 nt15.01□□□□□ -0.01
RCL1Q08096 RSB1YOR049C 1065 nt15.01□□□□□ -0.01
RCL1Q08096 GAR1YHR089C 618 nt14.78□□□□□ -0.04
RCL1Q08096 DEP1YAL013W 1218 nt14.73□□□□□ -0.05
RCL1Q08096 PST2YDR032C 597 nt14.72□□□□□ -0.05
RCL1Q08096 URN1YPR152C 1398 nt14.68□□□□□ -0.06
RCL1Q08096 YNL208WYNL208W 600 nt14.47□□□□□ -0.09
RCL1Q08096 RPN10YHR200W 807 nt14.44□□□□□ -0.1
RCL1Q08096 OPI9YLR338W 858 nt14.44□□□□□ -0.1
RCL1Q08096 PUT4YOR348C 1884 nt14.44□□□□□ -0.1
RCL1Q08096 SAH1YER043C 1350 nt14.34□□□□□ -0.11
RCL1Q08096 TIR1YER011W 765 nt14.27□□□□□ -0.13
RCL1Q08096 ARE1YCR048W 1833 nt14.22□□□□□ -0.13
RCL1Q08096 YKL097CYKL097C 411 nt14.17□□□□□ -0.14
RCL1Q08096 SHU1YHL006C 453 nt14.1□□□□□ -0.15
RCL1Q08096 SSA1YAL005C 1929 nt14.09□□□□□ -0.15
RCL1Q08096 YHR049C-AYHR049C-A 297 nt14.02□□□□□ -0.17
RCL1Q08096 YJR018WYJR018W 363 nt14.01□□□□□ -0.17
RCL1Q08096 PUN1YLR414C 792 nt14□□□□□ -0.17
RCL1Q08096 POA1YBR022W 534 nt14□□□□□ -0.17
RCL1Q08096 SRB2YHR041C 633 nt13.92□□□□□ -0.18
RCL1Q08096 YAL037C-BYAL037C-B 975 nt13.87□□□□□ -0.19
RCL1Q08096 YJR120WYJR120W 351 nt13.85□□□□□ -0.19
RCL1Q08096 PTC2YER089C 1395 nt13.84□□□□□ -0.19
RCL1Q08096 SSA3YBL075C 1950 nt13.76□□□□□ -0.21
RCL1Q08096 RPP2BYDR382W 333 nt13.72□□□□□ -0.21
RCL1Q08096 BUD23YCR047C 828 nt13.71□□□□□ -0.21
RCL1Q08096 WWM1YFL010C 636 nt13.68□□□□□ -0.22
RCL1Q08096 BSC6YOL137W 1494 nt13.67□□□□□ -0.22
RCL1Q08096 NAB2YGL122C 1578 nt13.62□□□□□ -0.23
RCL1Q08096 YOR139CYOR139C 393 nt13.62□□□□□ -0.23
RCL1Q08096 YGR021WYGR021W 873 nt13.58□□□□□ -0.24
RCL1Q08096 HOM6YJR139C 1080 nt13.58□□□□□ -0.24
RCL1Q08096 MNP1YGL068W 585 nt13.55□□□□□ -0.24
RCL1Q08096 BDH2YAL061W 1254 nt13.49□□□□□ -0.25
RCL1Q08096 DAL1YIR027C 1383 nt13.47□□□□□ -0.25
RCL1Q08096 INM2YDR287W 879 nt13.47□□□□□ -0.25
RCL1Q08096 FIS1YIL065C 468 nt13.46□□□□□ -0.25
RCL1Q08096 FPR4YLR449W 1179 nt13.45□□□□□ -0.26
RCL1Q08096 NPL3YDR432W 1245 nt13.44□□□□□ -0.26
RCL1Q08096 YFL021C-AYFL021C-A 855 nt13.42□□□□□ -0.26
RCL1Q08096 YBL100CYBL100C 315 nt13.38□□□□□ -0.27
RCL1Q08096 RKM5YLR137W 1104 nt13.37□□□□□ -0.27
RCL1Q08096 PHO4YFR034C 939 nt13.35□□□□□ -0.27
RCL1Q08096 LSM3YLR438C-A 270 nt13.33□□□□□ -0.28
RCL1Q08096 YOL037CYOL037C 354 nt13.32□□□□□ -0.28
RCL1Q08096 FUN26YAL022C 1554 nt13.23□□□□□ -0.29
RCL1Q08096 TRM9YML014W 840 nt13.22□□□□□ -0.29
RCL1Q08096 tM(CAU)CtM(CAU)C 72 nt13.08□□□□□ -0.32
RCL1Q08096 IMT4tM(CAU)E 72 nt13.08□□□□□ -0.32
RCL1Q08096 IMT3tM(CAU)J3 72 nt13.08□□□□□ -0.32
RCL1Q08096 IMT1tM(CAU)O1 72 nt13.08□□□□□ -0.32
RCL1Q08096 IMT2tM(CAU)P 72 nt13.08□□□□□ -0.32
RCL1Q08096 CCT6YDR188W 1641 nt13.08□□□□□ -0.32
RCL1Q08096 YPS1YLR120C 1710 nt13.05□□□□□ -0.32
RCL1Q08096 YLR281CYLR281C 468 nt13.03□□□□□ -0.32
RCL1Q08096 ALF1YNL148C 765 nt12.99□□□□□ -0.33
RCL1Q08096 YDR095CYDR095C 411 nt12.98□□□□□ -0.33
RCL1Q08096 WHI5YOR083W 888 nt12.98□□□□□ -0.33
RCL1Q08096 PUS2YGL063W 1113 nt12.95□□□□□ -0.34
RCL1Q08096 SPT5YML010W 3192 nt12.94□□□□□ -0.34
RCL1Q08096 SUF2tP(AGG)C 72 nt12.94□□□□□ -0.34
RCL1Q08096 SUF10tP(AGG)N 72 nt12.94□□□□□ -0.34
RCL1Q08096 YHR165W-AYHR165W-A 312 nt12.89□□□□□ -0.35
RCL1Q08096 YLR154C-GYLR154C-G 150 nt12.86□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms