Protein–RNA interactions for Protein: Q03691

ROT1, Protein ROT1, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROT1Q03691 YML009W-BYML009W-B 477 nt19.96■□□□□ 0.79
ROT1Q03691 NSR1YGR159C 1245 nt19.7■□□□□ 0.74
ROT1Q03691 NOP1YDL014W 984 nt19.41■□□□□ 0.7
ROT1Q03691 YKL036CYKL036C 393 nt18.04■□□□□ 0.48
ROT1Q03691 MDJ1YFL016C 1536 nt17.48■□□□□ 0.39
ROT1Q03691 Q0297Q0297 156 nt17.05■□□□□ 0.32
ROT1Q03691 SRX1YKL086W 384 nt16.98■□□□□ 0.31
ROT1Q03691 YJL027CYJL027C 417 nt16.87■□□□□ 0.29
ROT1Q03691 SCS3YGL126W 1143 nt16.5■□□□□ 0.23
ROT1Q03691 YCR051WYCR051W 669 nt16.13■□□□□ 0.17
ROT1Q03691 YOL085CYOL085C 342 nt15.63■□□□□ 0.09
ROT1Q03691 DBP2YNL112W 1641 nt15.51■□□□□ 0.07
ROT1Q03691 PKP1YIL042C 1185 nt15.42■□□□□ 0.06
ROT1Q03691 RPP1BYDL130W 321 nt15.3■□□□□ 0.04
ROT1Q03691 TRN1tP(UGG)A 72 nt15.3■□□□□ 0.04
ROT1Q03691 SUF9tP(UGG)F 72 nt15.3■□□□□ 0.04
ROT1Q03691 SUF8tP(UGG)H 72 nt15.3■□□□□ 0.04
ROT1Q03691 tP(UGG)LtP(UGG)L 72 nt15.3■□□□□ 0.04
ROT1Q03691 SUF7tP(UGG)M 72 nt15.3■□□□□ 0.04
ROT1Q03691 tP(UGG)N1tP(UGG)N1 72 nt15.3■□□□□ 0.04
ROT1Q03691 tP(UGG)N2tP(UGG)N2 72 nt15.3■□□□□ 0.04
ROT1Q03691 tP(UGG)O1tP(UGG)O1 72 nt15.3■□□□□ 0.04
ROT1Q03691 SUF11tP(UGG)O2 72 nt15.3■□□□□ 0.04
ROT1Q03691 CCC1YLR220W 969 nt15.17■□□□□ 0.02
ROT1Q03691 YBR190WYBR190W 312 nt14.81□□□□□ -0.04
ROT1Q03691 ATS1YAL020C 1002 nt14.78□□□□□ -0.04
ROT1Q03691 SCJ1YMR214W 1134 nt14.73□□□□□ -0.05
ROT1Q03691 PET122YER153C 765 nt14.63□□□□□ -0.07
ROT1Q03691 RVS167YDR388W 1449 nt14.54□□□□□ -0.08
ROT1Q03691 tP(UGG)O3tP(UGG)O3 72 nt14.51□□□□□ -0.09
ROT1Q03691 RTC3YHR087W 336 nt14.5□□□□□ -0.09
ROT1Q03691 SCR1SCR1 522 nt14.47□□□□□ -0.09
ROT1Q03691 RRN5YLR141W 1092 nt14.21□□□□□ -0.13
ROT1Q03691 SHR5YOL110W 714 nt14.07□□□□□ -0.16
ROT1Q03691 YDJ1YNL064C 1230 nt14.02□□□□□ -0.17
ROT1Q03691 RSB1YOR049C 1065 nt13.95□□□□□ -0.18
ROT1Q03691 YER088W-BYER088W-B 147 nt13.93□□□□□ -0.18
ROT1Q03691 GAR1YHR089C 618 nt13.72□□□□□ -0.21
ROT1Q03691 DEP1YAL013W 1218 nt13.7□□□□□ -0.22
ROT1Q03691 PST2YDR032C 597 nt13.66□□□□□ -0.22
ROT1Q03691 URN1YPR152C 1398 nt13.63□□□□□ -0.23
ROT1Q03691 YNL208WYNL208W 600 nt13.42□□□□□ -0.26
ROT1Q03691 PUT4YOR348C 1884 nt13.42□□□□□ -0.26
ROT1Q03691 RPN10YHR200W 807 nt13.41□□□□□ -0.26
ROT1Q03691 OPI9YLR338W 858 nt13.39□□□□□ -0.27
ROT1Q03691 SAH1YER043C 1350 nt13.32□□□□□ -0.28
ROT1Q03691 TIR1YER011W 765 nt13.24□□□□□ -0.29
ROT1Q03691 ARE1YCR048W 1833 nt13.21□□□□□ -0.29
ROT1Q03691 YKL097CYKL097C 411 nt13.19□□□□□ -0.3
ROT1Q03691 SHU1YHL006C 453 nt13.1□□□□□ -0.31
ROT1Q03691 SSA1YAL005C 1929 nt13.09□□□□□ -0.31
ROT1Q03691 YHR049C-AYHR049C-A 297 nt13.04□□□□□ -0.32
ROT1Q03691 POA1YBR022W 534 nt13.02□□□□□ -0.33
ROT1Q03691 YJR018WYJR018W 363 nt12.99□□□□□ -0.33
ROT1Q03691 PUN1YLR414C 792 nt12.99□□□□□ -0.33
ROT1Q03691 SRB2YHR041C 633 nt12.98□□□□□ -0.33
ROT1Q03691 YJR120WYJR120W 351 nt12.9□□□□□ -0.34
ROT1Q03691 YAL037C-BYAL037C-B 975 nt12.9□□□□□ -0.34
ROT1Q03691 PTC2YER089C 1395 nt12.85□□□□□ -0.35
ROT1Q03691 BUD23YCR047C 828 nt12.74□□□□□ -0.37
ROT1Q03691 RPP2BYDR382W 333 nt12.74□□□□□ -0.37
ROT1Q03691 WWM1YFL010C 636 nt12.71□□□□□ -0.37
ROT1Q03691 BSC6YOL137W 1494 nt12.71□□□□□ -0.38
ROT1Q03691 YOR139CYOR139C 393 nt12.66□□□□□ -0.38
ROT1Q03691 YGR021WYGR021W 873 nt12.63□□□□□ -0.39
ROT1Q03691 NAB2YGL122C 1578 nt12.62□□□□□ -0.39
ROT1Q03691 MNP1YGL068W 585 nt12.61□□□□□ -0.39
ROT1Q03691 HOM6YJR139C 1080 nt12.61□□□□□ -0.39
ROT1Q03691 SSA3YBL075C 1950 nt12.56□□□□□ -0.4
ROT1Q03691 FIS1YIL065C 468 nt12.52□□□□□ -0.41
ROT1Q03691 BDH2YAL061W 1254 nt12.52□□□□□ -0.41
ROT1Q03691 NPL3YDR432W 1245 nt12.5□□□□□ -0.41
ROT1Q03691 FPR4YLR449W 1179 nt12.5□□□□□ -0.41
ROT1Q03691 DAL1YIR027C 1383 nt12.5□□□□□ -0.41
ROT1Q03691 INM2YDR287W 879 nt12.48□□□□□ -0.41
ROT1Q03691 YFL021C-AYFL021C-A 855 nt12.47□□□□□ -0.41
ROT1Q03691 RKM5YLR137W 1104 nt12.42□□□□□ -0.42
ROT1Q03691 YBL100CYBL100C 315 nt12.42□□□□□ -0.42
ROT1Q03691 PHO4YFR034C 939 nt12.4□□□□□ -0.42
ROT1Q03691 YOL037CYOL037C 354 nt12.4□□□□□ -0.42
ROT1Q03691 LSM3YLR438C-A 270 nt12.36□□□□□ -0.43
ROT1Q03691 FUN26YAL022C 1554 nt12.28□□□□□ -0.44
ROT1Q03691 TRM9YML014W 840 nt12.25□□□□□ -0.45
ROT1Q03691 tM(CAU)CtM(CAU)C 72 nt12.14□□□□□ -0.47
ROT1Q03691 IMT4tM(CAU)E 72 nt12.14□□□□□ -0.47
ROT1Q03691 IMT3tM(CAU)J3 72 nt12.14□□□□□ -0.47
ROT1Q03691 IMT1tM(CAU)O1 72 nt12.14□□□□□ -0.47
ROT1Q03691 IMT2tM(CAU)P 72 nt12.14□□□□□ -0.47
ROT1Q03691 CCT6YDR188W 1641 nt12.14□□□□□ -0.47
ROT1Q03691 YPS1YLR120C 1710 nt12.11□□□□□ -0.47
ROT1Q03691 YLR281CYLR281C 468 nt12.09□□□□□ -0.47
ROT1Q03691 YDR095CYDR095C 411 nt12.06□□□□□ -0.48
ROT1Q03691 ALF1YNL148C 765 nt12.05□□□□□ -0.48
ROT1Q03691 WHI5YOR083W 888 nt12.04□□□□□ -0.48
ROT1Q03691 SPT5YML010W 3192 nt12.02□□□□□ -0.48
ROT1Q03691 PUS2YGL063W 1113 nt12.02□□□□□ -0.49
ROT1Q03691 SUF2tP(AGG)C 72 nt12.01□□□□□ -0.49
ROT1Q03691 SUF10tP(AGG)N 72 nt12.01□□□□□ -0.49
ROT1Q03691 YHR165W-AYHR165W-A 312 nt11.97□□□□□ -0.49
ROT1Q03691 YLR154C-GYLR154C-G 150 nt11.94□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms