RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W BUD3P25558 1636 aa8.94□□□□□ -0.98
UFD1YGR048W CDC37P06101 506 aaKnown RBP8.94□□□□□ -0.98
UFD1YGR048W ERG12P07277 443 aa8.94□□□□□ -0.98
UFD1YGR048W FRS2P15625 503 aaKnown RBP8.94□□□□□ -0.98
UFD1YGR048W CDC3P32457 520 aaKnown RBP8.94□□□□□ -0.98
UFD1YGR048W LEM3P42838 414 aa8.94□□□□□ -0.98
UFD1YGR048W JJJ1P53863 590 aa8.94□□□□□ -0.98
UFD1YGR048W RBA50Q04418 439 aa8.94□□□□□ -0.98
UFD1YGR048W SGD1Q06132 899 aa8.94□□□□□ -0.98
UFD1YGR048W ABP140Q08641 628 aaKnown RBP8.94□□□□□ -0.98
UFD1YGR048W PRP16P15938 1071 aaPredicted RBP8.93□□□□□ -0.98
UFD1YGR048W DPB3P27344 201 aa8.93□□□□□ -0.98
UFD1YGR048W CCT4P39078 528 aaKnown RBP8.93□□□□□ -0.98
UFD1YGR048W VPS8P39702 1274 aa8.93□□□□□ -0.98
UFD1YGR048W APL6P46682 809 aa8.93□□□□□ -0.98
UFD1YGR048W MAL13P53338 473 aa8.93□□□□□ -0.98
UFD1YGR048W YNR021WP53723 404 aaKnown RBP8.93□□□□□ -0.98
UFD1YGR048W EIS1Q05050 843 aaKnown RBP8.93□□□□□ -0.98
UFD1YGR048W STE23Q06010 1027 aa8.93□□□□□ -0.98
UFD1YGR048W KRS1P15180 591 aaKnown RBP8.92□□□□□ -0.98
UFD1YGR048W RPO26P20435 155 aa8.92□□□□□ -0.98
UFD1YGR048W CLN1P20437 546 aa8.92□□□□□ -0.98
UFD1YGR048W MBR1P23493 339 aa8.92□□□□□ -0.98
UFD1YGR048W CDC60P26637 1090 aaKnown RBP8.92□□□□□ -0.98
UFD1YGR048W YSW1P38280 609 aa8.92□□□□□ -0.98
UFD1YGR048W AIM20P40451 204 aa8.92□□□□□ -0.98
UFD1YGR048W ILM1P47155 203 aa8.92□□□□□ -0.98
UFD1YGR048W VMS1Q04311 632 aaKnown RBP8.92□□□□□ -0.98
UFD1YGR048W RUD3Q12234 484 aaKnown RBP8.92□□□□□ -0.98
UFD1YGR048W MCM16Q12262 181 aa8.92□□□□□ -0.98
UFD1YGR048W PMR1P13586 950 aa8.91□□□□□ -0.98
UFD1YGR048W CST6P40535 587 aa8.91□□□□□ -0.98
UFD1YGR048W FPK1P53739 893 aa8.91□□□□□ -0.98
UFD1YGR048W CUS1Q02554 436 aaPredicted RBP8.91□□□□□ -0.98
UFD1YGR048W YMR196WQ04336 1088 aa8.91□□□□□ -0.98
UFD1YGR048W DDP1Q99321 188 aaKnown RBP8.91□□□□□ -0.98
UFD1YGR048W RPL19AP0CX82 189 aaKnown RBP8.9□□□□□ -0.98
UFD1YGR048W RPL19BP0CX83 189 aaPredicted RBP8.9□□□□□ -0.98
UFD1YGR048W SSA1P10591 642 aaKnown RBP8.9□□□□□ -0.98
UFD1YGR048W SSA2P10592 639 aaKnown RBP8.9□□□□□ -0.98
UFD1YGR048W MCM1P11746 286 aa8.9□□□□□ -0.98
UFD1YGR048W UBC1P21734 215 aaKnown RBP8.9□□□□□ -0.98
UFD1YGR048W TFG2P41896 400 aaPredicted RBP8.9□□□□□ -0.98
UFD1YGR048W OSW7P43611 510 aa8.9□□□□□ -0.98
UFD1YGR048W YGL242CP53066 181 aa8.9□□□□□ -0.98
UFD1YGR048W YNL115CP53925 644 aa8.9□□□□□ -0.98
UFD1YGR048W YCG1Q06680 1035 aa8.9□□□□□ -0.98
UFD1YGR048W GLE1Q12315 538 aa8.9□□□□□ -0.98
UFD1YGR048W VMR1P38735 1592 aa8.9□□□□□ -0.99
UFD1YGR048W GAL11P19659 1081 aa8.89□□□□□ -0.99
UFD1YGR048W SIT4P20604 311 aa8.89□□□□□ -0.99
UFD1YGR048W PAT1P25644 796 aaKnown RBP8.89□□□□□ -0.99
UFD1YGR048W PRX1P34227 261 aaKnown RBP8.89□□□□□ -0.99
UFD1YGR048W PAC1P39946 494 aaKnown RBP8.89□□□□□ -0.99
UFD1YGR048W YRB1P41920 201 aaKnown RBP8.89□□□□□ -0.99
UFD1YGR048W PEX14P53112 341 aa8.89□□□□□ -0.99
UFD1YGR048W TUB4P53378 473 aa8.89□□□□□ -0.99
UFD1YGR048W NCS2P53923 493 aaPredicted RBP8.89□□□□□ -0.99
UFD1YGR048W FRK1Q03002 865 aaPredicted RBP8.89□□□□□ -0.99
UFD1YGR048W RSA3Q05942 220 aaKnown RBP8.89□□□□□ -0.99
UFD1YGR048W SFH1Q06168 426 aa8.89□□□□□ -0.99
UFD1YGR048W NKP1Q12493 238 aa8.89□□□□□ -0.99
UFD1YGR048W CDC16P09798 840 aa8.88□□□□□ -0.99
UFD1YGR048W SWI6P09959 803 aa8.88□□□□□ -0.99
UFD1YGR048W CLB4P24871 460 aa8.88□□□□□ -0.99
UFD1YGR048W RPL5P26321 297 aaKnown RBP8.88□□□□□ -0.99
UFD1YGR048W BRF1P29056 596 aa8.88□□□□□ -0.99
UFD1YGR048W YEL043WP32618 956 aa8.88□□□□□ -0.99
UFD1YGR048W TFC3P34111 1160 aa8.88□□□□□ -0.99
UFD1YGR048W REI1P38344 393 aaPredicted RBP8.88□□□□□ -0.99
UFD1YGR048W LAM1P38851 1228 aa8.88□□□□□ -0.99
UFD1YGR048W SPR3P41901 512 aa8.88□□□□□ -0.99
UFD1YGR048W APT1P49435 187 aaKnown RBP8.88□□□□□ -0.99
UFD1YGR048W IST1P53843 298 aaPredicted RBP8.88□□□□□ -0.99
UFD1YGR048W YOR223WQ12015 292 aa8.88□□□□□ -0.99
UFD1YGR048W SAC3P46674 1301 aa8.87□□□□□ -0.99
UFD1YGR048W HSC82P15108 705 aaKnown RBP8.87□□□□□ -0.99
UFD1YGR048W PRE10P21242 288 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
UFD1YGR048W SCJ1P25303 377 aa8.87□□□□□ -0.99
UFD1YGR048W PDB1P32473 366 aaKnown RBP8.87□□□□□ -0.99
UFD1YGR048W KAR9P32526 644 aa8.87□□□□□ -0.99
UFD1YGR048W YNG2P38806 282 aaKnown RBP8.87□□□□□ -0.99
UFD1YGR048W MET10P39692 1035 aa8.87□□□□□ -0.99
UFD1YGR048W HUL4P40985 892 aa8.87□□□□□ -0.99
UFD1YGR048W RTF1P53064 558 aa8.87□□□□□ -0.99
UFD1YGR048W ASI1P54074 624 aa8.87□□□□□ -0.99
UFD1YGR048W VTC3Q02725 835 aa8.87□□□□□ -0.99
UFD1YGR048W AGE1Q04412 482 aa8.87□□□□□ -0.99
UFD1YGR048W SDH5Q08230 162 aa8.87□□□□□ -0.99
UFD1YGR048W CTI6Q08923 506 aa8.87□□□□□ -0.99
UFD1YGR048W RRP5Q05022 1729 aaKnown RBP8.86□□□□□ -0.99
UFD1YGR048W RPA190P10964 1664 aaKnown RBP8.86□□□□□ -0.99
UFD1YGR048W VAS1P07806 1104 aaKnown RBP8.86□□□□□ -0.99
UFD1YGR048W KAR2P16474 682 aaKnown RBP8.86□□□□□ -0.99
UFD1YGR048W DAL7P21826 554 aa8.86□□□□□ -0.99
UFD1YGR048W SLY41P22215 453 aa8.86□□□□□ -0.99
UFD1YGR048W BUD14P27637 709 aa8.86□□□□□ -0.99
UFD1YGR048W ECM32P32644 1121 aaKnown RBP8.86□□□□□ -0.99
UFD1YGR048W TOA1P32773 286 aa8.86□□□□□ -0.99
UFD1YGR048W YKR018CP36114 725 aa8.86□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 75.9 ms