RNA–Protein interactions for RNA: YIR022W

SEC11, Transcript of 18kDa catalytic subunit of the Signal Peptidase Complex (SPC), yeast

Gene SEC11, Length 504 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC11	YIR022W	MGA2	P40578	1113 aa		13.19	□□□□□ -0.3
SEC11	YIR022W	RBA50	Q04418	439 aa		13.19	□□□□□ -0.3
SEC11	YIR022W	EST2	Q06163	884 aa		13.19	□□□□□ -0.3
SEC11	YIR022W	SPN1	Q06505	410 aa	Predicted RBP	13.19	□□□□□ -0.3
SEC11	YIR022W	PIF1	P07271	859 aa		13.18	□□□□□ -0.3
SEC11	YIR022W	SAC6	P32599	642 aa	Known RBP	13.18	□□□□□ -0.3
SEC11	YIR022W	RRP1	P35178	278 aa	Predicted RBP	13.18	□□□□□ -0.3
SEC11	YIR022W	PSY4	P38193	441 aa		13.18	□□□□□ -0.3
SEC11	YIR022W	MSH4	P40965	878 aa	Predicted RBP	13.18	□□□□□ -0.3
SEC11	YIR022W	UBP16	Q02863	499 aa		13.18	□□□□□ -0.3
SEC11	YIR022W	GFD1	Q04839	188 aa	Known RBP	13.18	□□□□□ -0.3
SEC11	YIR022W	APL4	Q12028	832 aa		13.18	□□□□□ -0.3
SEC11	YIR022W	LAM4	P38800	1345 aa		13.17	□□□□□ -0.3
SEC11	YIR022W	HCA4	P20448	770 aa	Known RBP	13.17	□□□□□ -0.3
SEC11	YIR022W	STE11	P23561	717 aa		13.17	□□□□□ -0.3
SEC11	YIR022W	MCM4	P30665	933 aa	Known RBP	13.17	□□□□□ -0.3
SEC11	YIR022W	NDC80	P40460	691 aa		13.17	□□□□□ -0.3
SEC11	YIR022W	ALD3	P54114	506 aa		13.17	□□□□□ -0.3
SEC11	YIR022W	PKH3	Q03306	898 aa	Predicted RBP	13.17	□□□□□ -0.3
SEC11	YIR022W	TLG2	Q08144	397 aa		13.17	□□□□□ -0.3
SEC11	YIR022W	YKL068W-A	Q3E826	78 aa		13.17	□□□□□ -0.3
SEC11	YIR022W	SAC3	P46674	1301 aa		13.16	□□□□□ -0.3
SEC11	YIR022W	PDC1	P06169	563 aa	Known RBP	13.16	□□□□□ -0.3
SEC11	YIR022W	GRX1	P25373	110 aa	Known RBP	13.16	□□□□□ -0.3
SEC11	YIR022W	DPB3	P27344	201 aa		13.16	□□□□□ -0.3
SEC11	YIR022W	ADE17	P38009	592 aa	Known RBP	13.16	□□□□□ -0.3
SEC11	YIR022W	PCH2	P38126	564 aa		13.16	□□□□□ -0.3
SEC11	YIR022W	RPN10	P38886	268 aa	Known RBP	13.16	□□□□□ -0.3
SEC11	YIR022W	VPS41	P38959	992 aa		13.16	□□□□□ -0.3
SEC11	YIR022W	TUM1	Q08686	304 aa	Known RBP	13.16	□□□□□ -0.3
SEC11	YIR022W	UTP10	P42945	1769 aa	Known RBP	13.15	□□□□□ -0.3
SEC11	YIR022W	PHO13	P19881	312 aa		13.15	□□□□□ -0.3
SEC11	YIR022W	UBC1	P21734	215 aa	Known RBP	13.15	□□□□□ -0.3
SEC11	YIR022W	MSH3	P25336	1018 aa		13.15	□□□□□ -0.3
SEC11	YIR022W	RRP8	P38961	392 aa	Known RBP	13.15	□□□□□ -0.3
SEC11	YIR022W	ALF1	P53904	254 aa		13.15	□□□□□ -0.3
SEC11	YIR022W	TMA16	Q08687	178 aa		13.15	□□□□□ -0.3
SEC11	YIR022W	SSA2	P10592	639 aa	Known RBP	13.14	□□□□□ -0.31
SEC11	YIR022W	REI1	P38344	393 aa	Predicted RBP	13.14	□□□□□ -0.31
SEC11	YIR022W	RRB1	Q04225	511 aa	Known RBP	13.14	□□□□□ -0.31
SEC11	YIR022W	VPS38	Q05919	439 aa		13.14	□□□□□ -0.31
SEC11	YIR022W	MCM16	Q12262	181 aa		13.14	□□□□□ -0.31
SEC11	YIR022W	DCD1	P06773	312 aa		13.13	□□□□□ -0.31
SEC11	YIR022W	RRP43	P25359	394 aa	Predicted RBP	13.13	□□□□□ -0.31
SEC11	YIR022W	YEL043W	P32618	956 aa		13.13	□□□□□ -0.31
SEC11	YIR022W	RER2	P35196	286 aa		13.13	□□□□□ -0.31
SEC11	YIR022W	RTT107	P38850	1070 aa		13.13	□□□□□ -0.31
SEC11	YIR022W	STR2	P47164	639 aa		13.13	□□□□□ -0.31
SEC11	YIR022W	ADR1	P07248	1323 aa		13.13	□□□□□ -0.31
SEC11	YIR022W	SER1	P33330	395 aa	Known RBP	13.12	□□□□□ -0.31
SEC11	YIR022W	BMH2	P34730	273 aa	Known RBP	13.12	□□□□□ -0.31
SEC11	YIR022W	CCT4	P39078	528 aa	Known RBP	13.12	□□□□□ -0.31
SEC11	YIR022W	MVP1	P40959	511 aa	Known RBP	13.12	□□□□□ -0.31
SEC11	YIR022W	MAL13	P53338	473 aa		13.12	□□□□□ -0.31
SEC11	YIR022W	ENT1	Q12518	454 aa		13.12	□□□□□ -0.31
SEC11	YIR022W	YRF1-3	P0CX14	1859 aa		13.11	□□□□□ -0.31
SEC11	YIR022W	YRF1-7	P0CX15	1859 aa		13.11	□□□□□ -0.31
SEC11	YIR022W	YRF1-6	P53819	1859 aa		13.11	□□□□□ -0.31
SEC11	YIR022W	FYV8	P46949	817 aa	Known RBP	13.11	□□□□□ -0.31
SEC11	YIR022W	CUE3	P53137	624 aa	Known RBP	13.11	□□□□□ -0.31
SEC11	YIR022W	CAF130	P53280	1122 aa	Predicted RBP	13.11	□□□□□ -0.31
SEC11	YIR022W	SML1	Q04964	104 aa		13.11	□□□□□ -0.31
SEC11	YIR022W	NBL1	Q3E7Y6	73 aa		13.11	□□□□□ -0.31
SEC11	YIR022W	RNA1	P11745	407 aa	Known RBP	13.1	□□□□□ -0.31
SEC11	YIR022W	MSH1	P25846	959 aa		13.1	□□□□□ -0.31
SEC11	YIR022W	AKR1	P39010	764 aa		13.1	□□□□□ -0.31
SEC11	YIR022W	IRC8	P47046	822 aa		13.1	□□□□□ -0.31
SEC11	YIR022W	YGL140C	P53120	1219 aa		13.1	□□□□□ -0.31
SEC11	YIR022W	CSC1	Q06538	782 aa		13.1	□□□□□ -0.31
SEC11	YIR022W	DCS2	Q12123	353 aa		13.1	□□□□□ -0.31
SEC11	YIR022W	YOL098C	Q12496	1037 aa		13.1	□□□□□ -0.31
SEC11	YIR022W	BMH1	P29311	267 aa	Known RBP	13.09	□□□□□ -0.31
SEC11	YIR022W	ASF1	P32447	279 aa		13.09	□□□□□ -0.31
SEC11	YIR022W	STO1	P34160	861 aa	Known RBP	13.09	□□□□□ -0.31
SEC11	YIR022W	RIX1	P38883	763 aa	Predicted RBP	13.09	□□□□□ -0.31
SEC11	YIR022W	KAR5	Q04746	504 aa		13.09	□□□□□ -0.31
SEC11	YIR022W	GET3	Q12154	354 aa	Known RBP	13.09	□□□□□ -0.31
SEC11	YIR022W	POM152	P39685	1337 aa		13.09	□□□□□ -0.31
SEC11	YIR022W	RPO26	P20435	155 aa		13.08	□□□□□ -0.32
SEC11	YIR022W	REB1	P21538	810 aa		13.08	□□□□□ -0.32
SEC11	YIR022W	URA1	P28272	314 aa	Predicted RBP	13.08	□□□□□ -0.32
SEC11	YIR022W	GDT1	P38301	280 aa	Predicted RBP	13.08	□□□□□ -0.32
SEC11	YIR022W	SPT8	P38915	602 aa		13.08	□□□□□ -0.32
SEC11	YIR022W	AFT2	Q08957	416 aa		13.08	□□□□□ -0.32
SEC11	YIR022W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	13.08	□□□□□ -0.32	not detected
SEC11	YIR022W	SWI4	P25302	1093 aa	Known RBP	13.07	□□□□□ -0.32
SEC11	YIR022W	EFM2	P38347	419 aa		13.07	□□□□□ -0.32
SEC11	YIR022W	ATG9	Q12142	997 aa		13.07	□□□□□ -0.32
SEC11	YIR022W	CDC37	P06101	506 aa	Known RBP	13.06	□□□□□ -0.32
SEC11	YIR022W	NPL4	P33755	580 aa		13.06	□□□□□ -0.32
SEC11	YIR022W	SPT21	P35209	758 aa		13.06	□□□□□ -0.32
SEC11	YIR022W	HAL5	P38970	855 aa	Known RBP	13.06	□□□□□ -0.32
SEC11	YIR022W	DSN1	P40568	576 aa		13.06	□□□□□ -0.32
SEC11	YIR022W	OMS1	Q06668	471 aa		13.06	□□□□□ -0.32
SEC11	YIR022W	ATG23	Q06671	453 aa		13.06	□□□□□ -0.32
SEC11	YIR022W	PPM2	Q08282	695 aa		13.06	□□□□□ -0.32
SEC11	YIR022W	OSH2	Q12451	1283 aa		13.06	□□□□□ -0.32
SEC11	YIR022W	SEC65	P29478	273 aa		13.05	□□□□□ -0.32
SEC11	YIR022W	SLD2	P34252	453 aa		13.05	□□□□□ -0.32
SEC11	YIR022W	GEF1	P37020	779 aa		13.05	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms