RNA–Protein interactions for RNA: YFL055W

AGP3, Transcript of Low-affinity amino acid permease, yeastyeast

Gene AGP3, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AGP3YFL055W MCM4P30665 933 aaKnown RBP9.5□□□□□ -0.89
AGP3YFL055W OSH3P38713 996 aaKnown RBP9.5□□□□□ -0.89
AGP3YFL055W RRP43P25359 394 aaPredicted RBP9.49□□□□□ -0.89
AGP3YFL055W CAJ1P39101 391 aa9.49□□□□□ -0.89
AGP3YFL055W EPL1P43572 832 aa9.49□□□□□ -0.89
AGP3YFL055W RPN11P43588 306 aaKnown RBP9.49□□□□□ -0.89
AGP3YFL055W ECM23Q02710 187 aa9.49□□□□□ -0.89
AGP3YFL055W TMA16Q08687 178 aa9.49□□□□□ -0.89
AGP3YFL055W SWE1P32944 819 aa9.48□□□□□ -0.89
AGP3YFL055W APL2P36000 726 aaPredicted RBP9.48□□□□□ -0.89
AGP3YFL055W REI1P38344 393 aaPredicted RBP9.48□□□□□ -0.89
AGP3YFL055W GYP5Q12344 894 aa9.48□□□□□ -0.89
AGP3YFL055W AI2P03876 854 aa9.48□□□□□ -0.89
AGP3YFL055W PDC1P06169 563 aaKnown RBP9.48□□□□□ -0.89
AGP3YFL055W RGP1P16664 663 aa9.48□□□□□ -0.89
AGP3YFL055W OPI1P21957 404 aa9.48□□□□□ -0.89
AGP3YFL055W HSP82P02829 709 aaKnown RBP9.47□□□□□ -0.89
AGP3YFL055W HXK1P04806 485 aaKnown RBP9.47□□□□□ -0.89
AGP3YFL055W DPB3P27344 201 aa9.47□□□□□ -0.89
AGP3YFL055W RRP1P35178 278 aaPredicted RBP9.47□□□□□ -0.89
AGP3YFL055W NDC80P40460 691 aa9.47□□□□□ -0.89
AGP3YFL055W CAF130P53280 1122 aaPredicted RBP9.47□□□□□ -0.89
AGP3YFL055W UBP10P53874 792 aaPredicted RBP9.47□□□□□ -0.89
AGP3YFL055W PHO13P19881 312 aa9.46□□□□□ -0.89
AGP3YFL055W RMT2Q03305 412 aa9.46□□□□□ -0.89
AGP3YFL055W PKH1Q03407 766 aa9.46□□□□□ -0.89
AGP3YFL055W OSM1P21375 501 aaKnown RBP9.45□□□□□ -0.9
AGP3YFL055W DIT2P21595 489 aa9.45□□□□□ -0.9
AGP3YFL055W BUD31P25337 157 aaPredicted RBP9.45□□□□□ -0.9
AGP3YFL055W CCT4P39078 528 aaKnown RBP9.45□□□□□ -0.9
AGP3YFL055W MGA2P40578 1113 aa9.45□□□□□ -0.9
AGP3YFL055W FAS2P19097 1887 aaKnown RBP9.45□□□□□ -0.9
AGP3YFL055W STO1P34160 861 aaKnown RBP9.45□□□□□ -0.9
AGP3YFL055W SLD2P34252 453 aa9.45□□□□□ -0.9
AGP3YFL055W YKR075CP36155 307 aa9.45□□□□□ -0.9
AGP3YFL055W SEC9P40357 651 aa9.45□□□□□ -0.9
AGP3YFL055W CTK3P46963 296 aaPredicted RBP9.45□□□□□ -0.9
AGP3YFL055W MAL13P53338 473 aa9.45□□□□□ -0.9
AGP3YFL055W HCR1Q05775 265 aaKnown RBP9.45□□□□□ -0.9
AGP3YFL055W RPN7Q06103 429 aaKnown RBP9.45□□□□□ -0.9
AGP3YFL055W YLR271WQ06152 274 aa9.45□□□□□ -0.9
AGP3YFL055W ATG13Q06628 738 aa9.45□□□□□ -0.9
AGP3YFL055W YOL098CQ12496 1037 aa9.45□□□□□ -0.9
AGP3YFL055W RPO26P20435 155 aa9.44□□□□□ -0.9
AGP3YFL055W RGD1P38339 666 aa9.44□□□□□ -0.9
AGP3YFL055W NUG1P40010 520 aaKnown RBP9.44□□□□□ -0.9
AGP3YFL055W ALF1P53904 254 aa9.44□□□□□ -0.9
AGP3YFL055W FCP1Q03254 732 aa9.44□□□□□ -0.9
AGP3YFL055W VPS38Q05919 439 aa9.44□□□□□ -0.9
AGP3YFL055W LAM6Q08001 693 aa9.44□□□□□ -0.9
AGP3YFL055W LAM4P38800 1345 aa9.43□□□□□ -0.9
AGP3YFL055W SUP35P05453 685 aaKnown RBP9.43□□□□□ -0.9
AGP3YFL055W SEC18P18759 758 aaKnown RBP9.43□□□□□ -0.9
AGP3YFL055W MSH3P25336 1018 aa9.43□□□□□ -0.9
AGP3YFL055W SAP1P39955 897 aaKnown RBP9.43□□□□□ -0.9
AGP3YFL055W YMR147WP40218 223 aaKnown RBP9.43□□□□□ -0.9
AGP3YFL055W YNL193WP53870 558 aa9.43□□□□□ -0.9
AGP3YFL055W MTC5Q03897 1148 aa9.43□□□□□ -0.9
AGP3YFL055W GFD1Q04839 188 aaKnown RBP9.43□□□□□ -0.9
AGP3YFL055W OMS1Q06668 471 aa9.43□□□□□ -0.9
AGP3YFL055W ATG23Q06671 453 aa9.43□□□□□ -0.9
AGP3YFL055W YPR204WQ08995 1032 aa9.43□□□□□ -0.9
AGP3YFL055W SAC6P32599 642 aaKnown RBP9.42□□□□□ -0.9
AGP3YFL055W YEL043WP32618 956 aa9.42□□□□□ -0.9
AGP3YFL055W SKI2P35207 1287 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
AGP3YFL055W ADE17P38009 592 aaKnown RBP9.42□□□□□ -0.9
AGP3YFL055W YJL181WP46987 611 aa9.42□□□□□ -0.9
AGP3YFL055W CWC22P53333 577 aaKnown RBP9.42□□□□□ -0.9
AGP3YFL055W SSP2Q08646 371 aa9.42□□□□□ -0.9
AGP3YFL055W RPL22AP05749 121 aaKnown RBP9.42□□□□□ -0.9
AGP3YFL055W PFK2P16862 959 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
AGP3YFL055W HCA4P20448 770 aaKnown RBP9.42□□□□□ -0.9
AGP3YFL055W SAP190P36123 1033 aa9.42□□□□□ -0.9
AGP3YFL055W PXL1P36166 706 aa9.42□□□□□ -0.9
AGP3YFL055W NPR2P39923 615 aa9.42□□□□□ -0.9
AGP3YFL055W YBP2P53169 641 aa9.42□□□□□ -0.9
AGP3YFL055W AFT2Q08957 416 aa9.42□□□□□ -0.9
AGP3YFL055W SNU66Q12420 587 aaPredicted RBP9.42□□□□□ -0.9
AGP3YFL055W PRP40P33203 583 aaKnown RBP9.41□□□□□ -0.9
AGP3YFL055W ALD3P54114 506 aa9.41□□□□□ -0.9
AGP3YFL055W UBP16Q02863 499 aa9.41□□□□□ -0.9
AGP3YFL055W SSF2Q12153 453 aaPredicted RBP9.41□□□□□ -0.9
AGP3YFL055W CBP3P21560 335 aa9.4□□□□□ -0.9
AGP3YFL055W UBP1P25037 809 aa9.4□□□□□ -0.9
AGP3YFL055W SEC65P29478 273 aa9.4□□□□□ -0.9
AGP3YFL055W MUD2P36084 527 aaKnown RBP9.4□□□□□ -0.9
AGP3YFL055W RPN10P38886 268 aaKnown RBP9.4□□□□□ -0.9
AGP3YFL055W PKH3Q03306 898 aaPredicted RBP9.4□□□□□ -0.9
AGP3YFL055W DCS2Q12123 353 aa9.4□□□□□ -0.9
AGP3YFL055W ATG9Q12142 997 aa9.4□□□□□ -0.9
AGP3YFL055W MPH3P0CE00 602 aa9.39□□□□□ -0.91
AGP3YFL055W URA1P28272 314 aaPredicted RBP9.39□□□□□ -0.91
AGP3YFL055W CCC2P38995 1004 aa9.39□□□□□ -0.91
AGP3YFL055W YPL225WQ08971 146 aaKnown RBP9.39□□□□□ -0.91
AGP3YFL055W MET1P36150 593 aa9.39□□□□□ -0.91
AGP3YFL055W HUL4P40985 892 aa9.39□□□□□ -0.91
AGP3YFL055W EST2Q06163 884 aa9.39□□□□□ -0.91
AGP3YFL055W RUD3Q12234 484 aaKnown RBP9.39□□□□□ -0.91
AGP3YFL055W SEC23P15303 768 aaKnown RBP9.38□□□□□ -0.91
AGP3YFL055W ARG8P18544 423 aa9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms