RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W HXK1P04806 485 aaKnown RBP11.37□□□□□ -0.59
SNF1YDR477W YMR147WP40218 223 aaKnown RBP11.37□□□□□ -0.59
SNF1YDR477W YNL193WP53870 558 aa11.37□□□□□ -0.59
SNF1YDR477W YLR271WQ06152 274 aa11.37□□□□□ -0.59
SNF1YDR477W SEC18P18759 758 aaKnown RBP11.36□□□□□ -0.59
SNF1YDR477W DIT2P21595 489 aa11.36□□□□□ -0.59
SNF1YDR477W DPB3P27344 201 aa11.36□□□□□ -0.59
SNF1YDR477W STO1P34160 861 aaKnown RBP11.36□□□□□ -0.59
SNF1YDR477W RGD1P38339 666 aa11.36□□□□□ -0.59
SNF1YDR477W CAJ1P39101 391 aa11.36□□□□□ -0.59
SNF1YDR477W UBP10P53874 792 aaPredicted RBP11.36□□□□□ -0.59
SNF1YDR477W RMT2Q03305 412 aa11.36□□□□□ -0.59
SNF1YDR477W RIX1P38883 763 aaPredicted RBP11.35□□□□□ -0.59
SNF1YDR477W SAP1P39955 897 aaKnown RBP11.35□□□□□ -0.59
SNF1YDR477W PKH3Q03306 898 aaPredicted RBP11.35□□□□□ -0.59
SNF1YDR477W YRF1-3P0CX14 1859 aa11.35□□□□□ -0.59
SNF1YDR477W YRF1-7P0CX15 1859 aa11.35□□□□□ -0.59
SNF1YDR477W YRF1-6P53819 1859 aa11.35□□□□□ -0.59
SNF1YDR477W RRP1P35178 278 aaPredicted RBP11.35□□□□□ -0.59
SNF1YDR477W CCC2P38995 1004 aa11.35□□□□□ -0.59
SNF1YDR477W THI12P42883 340 aa11.35□□□□□ -0.59
SNF1YDR477W THI5P43534 340 aa11.35□□□□□ -0.59
SNF1YDR477W THI11P47183 340 aa11.35□□□□□ -0.59
SNF1YDR477W PKH1Q03407 766 aa11.35□□□□□ -0.59
SNF1YDR477W THI13Q07748 340 aa11.35□□□□□ -0.59
SNF1YDR477W CCT4P39078 528 aaKnown RBP11.34□□□□□ -0.59
SNF1YDR477W NDC80P40460 691 aa11.34□□□□□ -0.59
SNF1YDR477W MTC5Q03897 1148 aa11.34□□□□□ -0.59
SNF1YDR477W YMR196WQ04336 1088 aa11.34□□□□□ -0.59
SNF1YDR477W ARG8P18544 423 aa11.33□□□□□ -0.6
SNF1YDR477W ALF1P53904 254 aa11.33□□□□□ -0.6
SNF1YDR477W AFT2Q08957 416 aa11.33□□□□□ -0.6
SNF1YDR477W DCS2Q12123 353 aa11.33□□□□□ -0.6
SNF1YDR477W YOL098CQ12496 1037 aa11.33□□□□□ -0.6
SNF1YDR477W RPO26P20435 155 aa11.33□□□□□ -0.6
SNF1YDR477W MGA2P40578 1113 aa11.33□□□□□ -0.6
SNF1YDR477W CWC22P53333 577 aaKnown RBP11.33□□□□□ -0.6
SNF1YDR477W MAL13P53338 473 aa11.33□□□□□ -0.6
SNF1YDR477W YNL035CP53962 389 aaKnown RBP11.33□□□□□ -0.6
SNF1YDR477W ALD3P54114 506 aa11.33□□□□□ -0.6
SNF1YDR477W VPS38Q05919 439 aa11.33□□□□□ -0.6
SNF1YDR477W RSF2P46974 1380 aa11.33□□□□□ -0.6
SNF1YDR477W HCA4P20448 770 aaKnown RBP11.32□□□□□ -0.6
SNF1YDR477W URA1P28272 314 aaPredicted RBP11.32□□□□□ -0.6
SNF1YDR477W ADE17P38009 592 aaKnown RBP11.32□□□□□ -0.6
SNF1YDR477W ATG23Q06671 453 aa11.32□□□□□ -0.6
SNF1YDR477W DCD1P06773 312 aa11.31□□□□□ -0.6
SNF1YDR477W MSH3P25336 1018 aa11.31□□□□□ -0.6
SNF1YDR477W SKI2P35207 1287 aaKnown RBP RIP-Chip data11.31□□□□□ -0.6not detected
SNF1YDR477W BOP3P53958 396 aa11.31□□□□□ -0.6
SNF1YDR477W SSP2Q08646 371 aa11.31□□□□□ -0.6
SNF1YDR477W PFK2P16862 959 aaKnown RBP RIP-Chip data11.31□□□□□ -0.6not detected
SNF1YDR477W SEC65P29478 273 aa11.31□□□□□ -0.6
SNF1YDR477W SLD2P34252 453 aa11.31□□□□□ -0.6
SNF1YDR477W SHM1P37292 490 aaPredicted RBP11.31□□□□□ -0.6
SNF1YDR477W RPN10P38886 268 aaKnown RBP11.31□□□□□ -0.6
SNF1YDR477W NUG1P40010 520 aaKnown RBP11.31□□□□□ -0.6
SNF1YDR477W YBP2P53169 641 aa11.31□□□□□ -0.6
SNF1YDR477W GFD1Q04839 188 aaKnown RBP11.31□□□□□ -0.6
SNF1YDR477W HCR1Q05775 265 aaKnown RBP11.31□□□□□ -0.6
SNF1YDR477W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.31□□□□□ -0.6not detected
SNF1YDR477W RPL22AP05749 121 aaKnown RBP11.3□□□□□ -0.6
SNF1YDR477W CBP3P21560 335 aa11.3□□□□□ -0.6
SNF1YDR477W MUD2P36084 527 aaKnown RBP11.3□□□□□ -0.6
SNF1YDR477W SFH1Q06168 426 aa11.3□□□□□ -0.6
SNF1YDR477W SAC6P32599 642 aaKnown RBP11.29□□□□□ -0.6
SNF1YDR477W ECM32P32644 1121 aaKnown RBP11.29□□□□□ -0.6
SNF1YDR477W ATG9Q12142 997 aa11.29□□□□□ -0.6
SNF1YDR477W CDC6P09119 513 aa11.29□□□□□ -0.6
SNF1YDR477W YEL043WP32618 956 aa11.29□□□□□ -0.6
SNF1YDR477W CUE3P53137 624 aaKnown RBP11.29□□□□□ -0.6
SNF1YDR477W FRK1Q03002 865 aaPredicted RBP11.29□□□□□ -0.6
SNF1YDR477W OMS1Q06668 471 aa11.29□□□□□ -0.6
SNF1YDR477W TUM1Q08686 304 aaKnown RBP11.29□□□□□ -0.6
SNF1YDR477W YPL225WQ08971 146 aaKnown RBP11.29□□□□□ -0.6
SNF1YDR477W SAP190P36123 1033 aa11.28□□□□□ -0.6
SNF1YDR477W AKR1P39010 764 aa11.28□□□□□ -0.6
SNF1YDR477W HUL4P40985 892 aa11.28□□□□□ -0.6
SNF1YDR477W SNU66Q12420 587 aaPredicted RBP11.28□□□□□ -0.6
SNF1YDR477W MPH3P0CE00 602 aa11.27□□□□□ -0.6
SNF1YDR477W VPS1P21576 704 aaKnown RBP11.27□□□□□ -0.6
SNF1YDR477W PSE1P32337 1089 aaKnown RBP11.27□□□□□ -0.6
SNF1YDR477W MET1P36150 593 aa11.27□□□□□ -0.6
SNF1YDR477W RPS6AP0CX37 236 aaKnown RBP11.27□□□□□ -0.61
SNF1YDR477W RPS6BP0CX38 236 aaPredicted RBP11.27□□□□□ -0.61
SNF1YDR477W YET1P35723 206 aa11.27□□□□□ -0.61
SNF1YDR477W EST2Q06163 884 aa11.27□□□□□ -0.61
SNF1YDR477W SSF2Q12153 453 aaPredicted RBP11.27□□□□□ -0.61
SNF1YDR477W SUP35P05453 685 aaKnown RBP11.26□□□□□ -0.61
SNF1YDR477W SEC23P15303 768 aaKnown RBP11.26□□□□□ -0.61
SNF1YDR477W RER2P35196 286 aa11.26□□□□□ -0.61
SNF1YDR477W SIC1P38634 284 aa11.26□□□□□ -0.61
SNF1YDR477W YOR223WQ12015 292 aa11.26□□□□□ -0.61
SNF1YDR477W CRG1P38892 291 aaRIP-Chip data11.25□□□□□ -0.61not detected
SNF1YDR477W BUD16P39988 312 aa11.25□□□□□ -0.61
SNF1YDR477W ATG3P40344 310 aa11.25□□□□□ -0.61
SNF1YDR477W ATG13Q06628 738 aa11.25□□□□□ -0.61
SNF1YDR477W TAH18Q12181 623 aa11.25□□□□□ -0.61
SNF1YDR477W SWI4P25302 1093 aaKnown RBP11.25□□□□□ -0.61
SNF1YDR477W RIM101P33400 625 aa11.25□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms