RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W SLA1P32790 1244 aa8.04□□□□□ -1.12
TOD6YBL054W ALF1P53904 254 aa8.04□□□□□ -1.12
TOD6YBL054W VPS72Q03388 795 aa8.04□□□□□ -1.12
TOD6YBL054W VPS38Q05919 439 aa8.04□□□□□ -1.12
TOD6YBL054W YOL098CQ12496 1037 aa8.04□□□□□ -1.12
TOD6YBL054W SPT8P38915 602 aa8.03□□□□□ -1.12
TOD6YBL054W HUL4P40985 892 aa8.03□□□□□ -1.12
TOD6YBL054W SEC39Q12745 709 aa8.03□□□□□ -1.12
TOD6YBL054W RGP1P16664 663 aa8.02□□□□□ -1.13
TOD6YBL054W PEP3P27801 918 aa8.02□□□□□ -1.13
TOD6YBL054W ECM32P32644 1121 aaKnown RBP8.02□□□□□ -1.13
TOD6YBL054W SAP190P36123 1033 aa8.02□□□□□ -1.13
TOD6YBL054W EPS1P40557 701 aa8.02□□□□□ -1.13
TOD6YBL054W YJR008WP47085 338 aa8.02□□□□□ -1.13
TOD6YBL054W DOS2P54858 310 aa8.02□□□□□ -1.13
TOD6YBL054W SFH1Q06168 426 aa8.02□□□□□ -1.13
TOD6YBL054W ESF1Q06344 628 aaKnown RBP8.02□□□□□ -1.13
TOD6YBL054W UTP10P42945 1769 aaKnown RBP8.02□□□□□ -1.13
TOD6YBL054W SSK22P25390 1331 aaPredicted RBP8.02□□□□□ -1.13
TOD6YBL054W HXK1P04806 485 aaKnown RBP8.01□□□□□ -1.13
TOD6YBL054W MGA2P40578 1113 aa8.01□□□□□ -1.13
TOD6YBL054W GFD1Q04839 188 aaKnown RBP8.01□□□□□ -1.13
TOD6YBL054W HCR1Q05775 265 aaKnown RBP8.01□□□□□ -1.13
TOD6YBL054W OSH2Q12451 1283 aa8.01□□□□□ -1.13
TOD6YBL054W IMP2'P32351 346 aa8.01□□□□□ -1.13
TOD6YBL054W CCC2P38995 1004 aa8.01□□□□□ -1.13
TOD6YBL054W RIO2P40160 425 aaKnown RBP8.01□□□□□ -1.13
TOD6YBL054W EPL1P43572 832 aa8.01□□□□□ -1.13
TOD6YBL054W ECM23Q02710 187 aa8.01□□□□□ -1.13
TOD6YBL054W YOR223WQ12015 292 aa8.01□□□□□ -1.13
TOD6YBL054W HSP82P02829 709 aaKnown RBP8□□□□□ -1.13
TOD6YBL054W RPL22AP05749 121 aaKnown RBP8□□□□□ -1.13
TOD6YBL054W DIT2P21595 489 aa8□□□□□ -1.13
TOD6YBL054W PXL1P36166 706 aa8□□□□□ -1.13
TOD6YBL054W ADE17P38009 592 aaKnown RBP8□□□□□ -1.13
TOD6YBL054W OSH3P38713 996 aaKnown RBP8□□□□□ -1.13
TOD6YBL054W BUD16P39988 312 aa8□□□□□ -1.13
TOD6YBL054W MIC19P43594 170 aa8□□□□□ -1.13
TOD6YBL054W SEC23P15303 768 aaKnown RBP7.99□□□□□ -1.13
TOD6YBL054W HXT10P43581 546 aa7.99□□□□□ -1.13
TOD6YBL054W VPS4P52917 437 aa7.99□□□□□ -1.13
TOD6YBL054W BOP3P53958 396 aa7.99□□□□□ -1.13
TOD6YBL054W SPT2P06843 333 aaPredicted RBP7.98□□□□□ -1.13
TOD6YBL054W NFU1P32860 256 aa7.98□□□□□ -1.13
TOD6YBL054W CBF5P33322 483 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
TOD6YBL054W YJR079WP47126 109 aa7.98□□□□□ -1.13
TOD6YBL054W MAK10Q02197 733 aa7.98□□□□□ -1.13
TOD6YBL054W VPS64Q03944 604 aa7.98□□□□□ -1.13
TOD6YBL054W INP54Q08227 384 aaKnown RBP7.98□□□□□ -1.13
TOD6YBL054W SDH5Q08230 162 aa7.98□□□□□ -1.13
TOD6YBL054W RAD1P06777 1100 aa7.97□□□□□ -1.13
TOD6YBL054W ARD1P07347 238 aaPredicted RBP7.97□□□□□ -1.13
TOD6YBL054W PRE10P21242 288 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
TOD6YBL054W OPI1P21957 404 aa7.97□□□□□ -1.13
TOD6YBL054W SEC65P29478 273 aa7.97□□□□□ -1.13
TOD6YBL054W SAC6P32599 642 aaKnown RBP7.97□□□□□ -1.13
TOD6YBL054W MCX1P38323 520 aaPredicted RBP7.97□□□□□ -1.13
TOD6YBL054W VPS8P39702 1274 aa7.97□□□□□ -1.13
TOD6YBL054W MEC3Q02574 474 aa7.97□□□□□ -1.13
TOD6YBL054W VTC3Q02725 835 aa7.97□□□□□ -1.13
TOD6YBL054W YDR338CQ05497 695 aa7.97□□□□□ -1.13
TOD6YBL054W VAC14Q06708 880 aa7.97□□□□□ -1.13
TOD6YBL054W AFT2Q08957 416 aa7.97□□□□□ -1.13
TOD6YBL054W RAD3P06839 778 aa7.97□□□□□ -1.13
TOD6YBL054W CDC60P26637 1090 aaKnown RBP7.97□□□□□ -1.13
TOD6YBL054W RCR1P38212 213 aa7.97□□□□□ -1.13
TOD6YBL054W SET1P38827 1080 aaKnown RBP7.97□□□□□ -1.13
TOD6YBL054W YNL011CP53980 444 aa7.97□□□□□ -1.13
TOD6YBL054W STE23Q06010 1027 aa7.97□□□□□ -1.13
TOD6YBL054W PRP16P15938 1071 aaPredicted RBP7.96□□□□□ -1.14
TOD6YBL054W SPT5P27692 1063 aaKnown RBP7.96□□□□□ -1.14
TOD6YBL054W SMF1P38925 575 aa7.96□□□□□ -1.14
TOD6YBL054W ATG3P40344 310 aa7.96□□□□□ -1.14
TOD6YBL054W ERG5P54781 538 aa7.96□□□□□ -1.14
TOD6YBL054W MDM38Q08179 573 aa7.96□□□□□ -1.14
TOD6YBL054W HMI1Q12039 706 aa7.96□□□□□ -1.14
TOD6YBL054W NUR1Q12066 484 aa7.96□□□□□ -1.14
TOD6YBL054W SLM3Q12093 417 aa7.96□□□□□ -1.14
TOD6YBL054W PFK2P16862 959 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
TOD6YBL054W DAL7P21826 554 aa7.95□□□□□ -1.14
TOD6YBL054W CNS1P33313 385 aa7.95□□□□□ -1.14
TOD6YBL054W HEL1P36113 551 aa7.95□□□□□ -1.14
TOD6YBL054W EFM2P38347 419 aa7.95□□□□□ -1.14
TOD6YBL054W TRS85P46944 698 aa7.95□□□□□ -1.14
TOD6YBL054W GYP5Q12344 894 aa7.95□□□□□ -1.14
TOD6YBL054W AI2P03876 854 aa7.94□□□□□ -1.14
TOD6YBL054W MTF2P10849 440 aa7.94□□□□□ -1.14
TOD6YBL054W HCA4P20448 770 aaKnown RBP7.94□□□□□ -1.14
TOD6YBL054W CBP3P21560 335 aa7.94□□□□□ -1.14
TOD6YBL054W RAD53P22216 821 aa7.94□□□□□ -1.14
TOD6YBL054W URA1P28272 314 aaPredicted RBP7.94□□□□□ -1.14
TOD6YBL054W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
TOD6YBL054W SHM1P37292 490 aaPredicted RBP7.94□□□□□ -1.14
TOD6YBL054W PTC4P38089 393 aa7.94□□□□□ -1.14
TOD6YBL054W YSW1P38280 609 aa7.94□□□□□ -1.14
TOD6YBL054W CUE3P53137 624 aaKnown RBP7.94□□□□□ -1.14
TOD6YBL054W HOT1Q03213 719 aa7.94□□□□□ -1.14
TOD6YBL054W NOP6Q07623 225 aaKnown RBP7.94□□□□□ -1.14
TOD6YBL054W RMP1Q12530 201 aa7.94□□□□□ -1.14
TOD6YBL054W LAM4P38800 1345 aa7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms