RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W AIM7Q12156 149 aa6.03□□□□□ -1.44
SSL1YLR005W HAP1P0CE41 1502 aa6.02□□□□□ -1.45
SSL1YLR005W YSP2Q06681 1438 aa6.01□□□□□ -1.45
SSL1YLR005W CSN12P47130 423 aa6□□□□□ -1.45
SSL1YLR005W URN1Q06525 465 aaKnown RBP6□□□□□ -1.45
SSL1YLR005W MET32Q12041 191 aa6□□□□□ -1.45
SSL1YLR005W TY1B-NL2Q99337 1749 aaKnown RBP6□□□□□ -1.45
SSL1YLR005W RRD1P40454 393 aaKnown RBP5.99□□□□□ -1.45
SSL1YLR005W BRE2P43132 505 aa5.99□□□□□ -1.45
SSL1YLR005W RPA14P50106 137 aa5.99□□□□□ -1.45
SSL1YLR005W PKH3Q03306 898 aaPredicted RBP5.99□□□□□ -1.45
SSL1YLR005W ALR1Q08269 859 aa5.99□□□□□ -1.45
SSL1YLR005W LEU3P08638 886 aa5.98□□□□□ -1.45
SSL1YLR005W TPD3P31383 635 aa5.98□□□□□ -1.45
SSL1YLR005W ASH1P34233 588 aa5.98□□□□□ -1.45
SSL1YLR005W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
SSL1YLR005W MAK10Q02197 733 aa5.98□□□□□ -1.45
SSL1YLR005W YPR097WQ06839 1073 aa5.98□□□□□ -1.45
SSL1YLR005W KIN1P13185 1064 aa5.97□□□□□ -1.45
SSL1YLR005W ARG8P18544 423 aa5.96□□□□□ -1.45
SSL1YLR005W GCR2Q01722 534 aa5.96□□□□□ -1.45
SSL1YLR005W RSC30P38781 883 aa5.95□□□□□ -1.46
SSL1YLR005W NUP188P52593 1655 aaKnown RBP5.95□□□□□ -1.46
SSL1YLR005W IML1P47170 1584 aa5.95□□□□□ -1.46
SSL1YLR005W KIP2P28743 706 aa5.94□□□□□ -1.46
SSL1YLR005W SYH1Q02875 849 aaKnown RBP5.94□□□□□ -1.46
SSL1YLR005W HST3P53687 447 aa5.93□□□□□ -1.46
SSL1YLR005W IXR1P33417 597 aa5.93□□□□□ -1.46
SSL1YLR005W AFT1P22149 690 aa5.92□□□□□ -1.46
SSL1YLR005W RPN1P38764 993 aaKnown RBP5.92□□□□□ -1.46
SSL1YLR005W SRB8P25648 1427 aa5.92□□□□□ -1.46
SSL1YLR005W VMR1P38735 1592 aa5.92□□□□□ -1.46
SSL1YLR005W GAR1P28007 205 aaKnown RBP5.91□□□□□ -1.46
SSL1YLR005W RAD59Q12223 238 aa5.91□□□□□ -1.46
SSL1YLR005W GUA1P38625 525 aaKnown RBP5.89□□□□□ -1.47
SSL1YLR005W YJR115WP47152 169 aa5.88□□□□□ -1.47
SSL1YLR005W MET22P32179 357 aa5.87□□□□□ -1.47
SSL1YLR005W VAC17P25591 423 aa5.86□□□□□ -1.47
SSL1YLR005W SSA2P10592 639 aaKnown RBP5.85□□□□□ -1.47
SSL1YLR005W IPL1P38991 367 aa5.85□□□□□ -1.47
SSL1YLR005W UGA3P26370 528 aa5.84□□□□□ -1.47
SSL1YLR005W APP1P53933 587 aa5.84□□□□□ -1.47
SSL1YLR005W RGA2Q06407 1009 aa5.84□□□□□ -1.47
SSL1YLR005W GBP2P25555 427 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
SSL1YLR005W FIG4P42837 879 aa5.83□□□□□ -1.48
SSL1YLR005W THI12P42883 340 aa5.83□□□□□ -1.48
SSL1YLR005W THI5P43534 340 aa5.83□□□□□ -1.48
SSL1YLR005W THI11P47183 340 aa5.83□□□□□ -1.48
SSL1YLR005W MSB3P48566 633 aaPredicted RBP5.83□□□□□ -1.48
SSL1YLR005W THI13Q07748 340 aa5.83□□□□□ -1.48
SSL1YLR005W MRT4P33201 236 aaKnown RBP5.82□□□□□ -1.48
SSL1YLR005W YDR444WQ04093 687 aa5.82□□□□□ -1.48
SSL1YLR005W ENV9Q08651 330 aa5.81□□□□□ -1.48
SSL1YLR005W PDR5P33302 1511 aaKnown RBP5.81□□□□□ -1.48
SSL1YLR005W RGA1P39083 1007 aa5.8□□□□□ -1.48
SSL1YLR005W PTK2P47116 818 aaKnown RBP5.8□□□□□ -1.48
SSL1YLR005W BUD21Q08492 214 aaPredicted RBP5.8□□□□□ -1.48
SSL1YLR005W SRF1Q12516 437 aa5.8□□□□□ -1.48
SSL1YLR005W MAK16P10962 306 aaPredicted RBP5.78□□□□□ -1.48
SSL1YLR005W TEC1P18412 486 aa5.78□□□□□ -1.48
SSL1YLR005W LCB5Q06147 687 aaKnown RBP5.78□□□□□ -1.48
SSL1YLR005W YBL086CP38177 466 aa5.77□□□□□ -1.49
SSL1YLR005W EMW1P42842 904 aaKnown RBP5.77□□□□□ -1.49
SSL1YLR005W YPL062WQ02781 134 aa5.77□□□□□ -1.49
SSL1YLR005W PKC1P24583 1151 aa5.76□□□□□ -1.49
SSL1YLR005W TYS1P36421 394 aaKnown RBP5.76□□□□□ -1.49
SSL1YLR005W TFB3Q03290 321 aa5.76□□□□□ -1.49
SSL1YLR005W HPC2Q01448 625 aa5.75□□□□□ -1.49
SSL1YLR005W YPR084WQ06821 456 aa5.75□□□□□ -1.49
SSL1YLR005W YBL036CP38197 257 aa5.74□□□□□ -1.49
SSL1YLR005W OPT2Q06593 877 aa5.74□□□□□ -1.49
SSL1YLR005W GCN2P15442 1659 aa5.74□□□□□ -1.49
SSL1YLR005W GUT2P32191 649 aa5.72□□□□□ -1.49
SSL1YLR005W MKS1P34072 584 aa5.72□□□□□ -1.49
SSL1YLR005W BRL1P38770 471 aa5.72□□□□□ -1.49
SSL1YLR005W NUP85P46673 744 aa5.72□□□□□ -1.49
SSL1YLR005W DFG5Q05031 458 aa5.72□□□□□ -1.49
SSL1YLR005W CFT1Q06632 1357 aaKnown RBP5.72□□□□□ -1.49
SSL1YLR005W BCK1Q01389 1478 aa5.71□□□□□ -1.49
SSL1YLR005W ARG82P07250 355 aa5.71□□□□□ -1.5
SSL1YLR005W YDJ1P25491 409 aaKnown RBP5.71□□□□□ -1.5
SSL1YLR005W ISF1P32488 338 aa5.71□□□□□ -1.5
SSL1YLR005W AAD14P42884 376 aa5.71□□□□□ -1.5
SSL1YLR005W YRF1-2P40105 1681 aa5.7□□□□□ -1.5
SSL1YLR005W NUP192P47054 1683 aa5.7□□□□□ -1.5
SSL1YLR005W DLD1P32891 587 aa5.7□□□□□ -1.5
SSL1YLR005W CSE4P36012 229 aa5.7□□□□□ -1.5
SSL1YLR005W STE20Q03497 939 aaKnown RBP5.7□□□□□ -1.5
SSL1YLR005W YLR346CQ06139 101 aa5.7□□□□□ -1.5
SSL1YLR005W YDL176WQ12027 708 aa5.7□□□□□ -1.5
SSL1YLR005W NAF1P53919 492 aaKnown RBP5.69□□□□□ -1.5
SSL1YLR005W CAF120P53836 1060 aa5.68□□□□□ -1.5
SSL1YLR005W EMP47P43555 445 aa5.67□□□□□ -1.5
SSL1YLR005W FRA1Q07825 749 aa5.67□□□□□ -1.5
SSL1YLR005W MIP1P15801 1254 aa5.67□□□□□ -1.5
SSL1YLR005W FBP26P32604 452 aa5.67□□□□□ -1.5
SSL1YLR005W LSC2P53312 427 aa5.67□□□□□ -1.5
SSL1YLR005W ATG20Q07528 640 aa5.67□□□□□ -1.5
SSL1YLR005W BDS1Q08347 646 aa5.67□□□□□ -1.5
SSL1YLR005W KRE5P22023 1365 aa5.66□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms