RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT6	YGR116W	RPS19B	P07281	144 aa	Predicted RBP	4.21	□□□□□ -1.73
SPT6	YGR116W	HSP104	P31539	908 aa	Known RBP	4.21	□□□□□ -1.73
SPT6	YGR116W	MED8	P38304	223 aa		4.21	□□□□□ -1.73
SPT6	YGR116W	PET123	P17558	318 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	PRX1	P34227	261 aa	Known RBP	4.21	□□□□□ -1.74
SPT6	YGR116W	MNR2	P35724	969 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	ENV11	P53246	860 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	HXT17	P53631	564 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	YRF1-1	P0CX20	1796 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	YRF1-5	P0CX21	1796 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	YRF1-8	P0CX22	1796 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	HSP82	P02829	709 aa	Known RBP	4.21	□□□□□ -1.74
SPT6	YGR116W	TYS1	P36421	394 aa	Known RBP	4.21	□□□□□ -1.74
SPT6	YGR116W	RCM1	P53972	490 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	NCB2	Q92317	146 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	YOL087C	Q99247	1116 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	USO1	P25386	1790 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	SPT2	P06843	333 aa	Predicted RBP	4.21	□□□□□ -1.74
SPT6	YGR116W	RPN7	Q06103	429 aa	Known RBP	4.21	□□□□□ -1.74
SPT6	YGR116W	YCG1	Q06680	1035 aa		4.21	□□□□□ -1.74
SPT6	YGR116W	ILV3	P39522	585 aa	Known RBP	4.2	□□□□□ -1.74
SPT6	YGR116W	YGL140C	P53120	1219 aa		4.2	□□□□□ -1.74
SPT6	YGR116W	ATE1	P16639	503 aa		4.2	□□□□□ -1.74
SPT6	YGR116W	SWI3	P32591	825 aa		4.2	□□□□□ -1.74
SPT6	YGR116W	SLD2	P34252	453 aa		4.2	□□□□□ -1.74
SPT6	YGR116W	RRM3	P38766	723 aa		4.2	□□□□□ -1.74
SPT6	YGR116W	SML1	Q04964	104 aa		4.2	□□□□□ -1.74
SPT6	YGR116W	PSK2	Q08217	1101 aa		4.2	□□□□□ -1.74
SPT6	YGR116W	MSB4	Q12317	492 aa		4.2	□□□□□ -1.74
SPT6	YGR116W	AUS1	Q08409	1394 aa		4.2	□□□□□ -1.74
SPT6	YGR116W	TLG2	Q08144	397 aa		4.2	□□□□□ -1.74
SPT6	YGR116W	SWI1	P09547	1314 aa		4.2	□□□□□ -1.74
SPT6	YGR116W	GCD7	P32502	381 aa	Predicted RBP	4.19	□□□□□ -1.74
SPT6	YGR116W	COG4	Q06096	861 aa		4.19	□□□□□ -1.74
SPT6	YGR116W	TRL1	P09880	827 aa	Known RBP	4.19	□□□□□ -1.74
SPT6	YGR116W	SWE1	P32944	819 aa		4.19	□□□□□ -1.74
SPT6	YGR116W	YBR287W	P38355	427 aa		4.19	□□□□□ -1.74
SPT6	YGR116W	SRP54	P20424	541 aa	Known RBP	4.19	□□□□□ -1.74
SPT6	YGR116W	RRP1	P35178	278 aa	Predicted RBP	4.19	□□□□□ -1.74
SPT6	YGR116W	GDT1	P38301	280 aa	Predicted RBP	4.19	□□□□□ -1.74
SPT6	YGR116W	RIO2	P40160	425 aa	Known RBP	4.19	□□□□□ -1.74
SPT6	YGR116W	SPO22	P40511	975 aa		4.19	□□□□□ -1.74
SPT6	YGR116W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SPT6	YGR116W	CTH1	P47976	325 aa		4.19	□□□□□ -1.74
SPT6	YGR116W	RIA1	P53893	1110 aa		4.19	□□□□□ -1.74
SPT6	YGR116W	OMS1	Q06668	471 aa		4.19	□□□□□ -1.74
SPT6	YGR116W	SWH1	P35845	1188 aa		4.18	□□□□□ -1.74
SPT6	YGR116W	CAJ1	P39101	391 aa		4.18	□□□□□ -1.74
SPT6	YGR116W	PUS1	Q12211	544 aa	Known RBP	4.18	□□□□□ -1.74
SPT6	YGR116W	TRS33	Q99394	268 aa		4.18	□□□□□ -1.74
SPT6	YGR116W	MVP1	P40959	511 aa	Known RBP	4.18	□□□□□ -1.74
SPT6	YGR116W	NSE3	Q05541	303 aa		4.18	□□□□□ -1.74
SPT6	YGR116W	DPS1	P04802	557 aa	Known RBP	4.18	□□□□□ -1.74
SPT6	YGR116W	ARD1	P07347	238 aa	Predicted RBP	4.18	□□□□□ -1.74
SPT6	YGR116W	ARP5	P53946	755 aa		4.18	□□□□□ -1.74
SPT6	YGR116W	RBA50	Q04418	439 aa		4.18	□□□□□ -1.74
SPT6	YGR116W	GAS4	Q08271	471 aa		4.18	□□□□□ -1.74
SPT6	YGR116W	BMS1	Q08965	1183 aa	Known RBP	4.18	□□□□□ -1.74
SPT6	YGR116W	DDP1	Q99321	188 aa	Known RBP	4.18	□□□□□ -1.74
SPT6	YGR116W	OSW7	P43611	510 aa		4.18	□□□□□ -1.74
SPT6	YGR116W	BRE1	Q07457	700 aa	Known RBP	4.18	□□□□□ -1.74
SPT6	YGR116W	RUD3	Q12234	484 aa	Known RBP	4.18	□□□□□ -1.74
SPT6	YGR116W	TAN1	P53072	289 aa	Predicted RBP	4.17	□□□□□ -1.74
SPT6	YGR116W	PSH1	Q12161	406 aa		4.17	□□□□□ -1.74
SPT6	YGR116W	YKL068W-A	Q3E826	78 aa		4.17	□□□□□ -1.74
SPT6	YGR116W	MSH1	P25846	959 aa		4.17	□□□□□ -1.74
SPT6	YGR116W	DOS2	P54858	310 aa		4.17	□□□□□ -1.74
SPT6	YGR116W	YMR102C	Q03177	834 aa		4.17	□□□□□ -1.74
SPT6	YGR116W	AOS1	Q06624	347 aa		4.17	□□□□□ -1.74
SPT6	YGR116W	PDR18	P53756	1333 aa		4.17	□□□□□ -1.74
SPT6	YGR116W	FRS2	P15625	503 aa	Known RBP	4.17	□□□□□ -1.74
SPT6	YGR116W	PPH3	P32345	308 aa		4.17	□□□□□ -1.74
SPT6	YGR116W	MDM38	Q08179	573 aa		4.17	□□□□□ -1.74
SPT6	YGR116W	SEC39	Q12745	709 aa		4.17	□□□□□ -1.74
SPT6	YGR116W	MSH3	P25336	1018 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	DPB3	P27344	201 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	ZUO1	P32527	433 aa	Known RBP	4.16	□□□□□ -1.74
SPT6	YGR116W	NTH2	P35172	780 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	APT1	P49435	187 aa	Known RBP	4.16	□□□□□ -1.74
SPT6	YGR116W	SSL2	Q00578	843 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	ELG1	Q12050	791 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	YEL043W	P32618	956 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	NFU1	P32860	256 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	YKT6	P36015	200 aa	Known RBP	4.16	□□□□□ -1.74
SPT6	YGR116W	NDC80	P40460	691 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	CTF18	P49956	741 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	VPS30	Q02948	557 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	STE11	P23561	717 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	PLP2	Q12017	286 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	MRP7	P12687	371 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	UGA3	P26370	528 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	YHL017W	P38745	532 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	SPT8	P38915	602 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	CCT4	P39078	528 aa	Known RBP	4.16	□□□□□ -1.74
SPT6	YGR116W	UBP10	P53874	792 aa	Predicted RBP	4.16	□□□□□ -1.74
SPT6	YGR116W	RIM20	Q12033	661 aa		4.16	□□□□□ -1.74
SPT6	YGR116W	TSR3	Q12094	313 aa	Known RBP	4.16	□□□□□ -1.74
SPT6	YGR116W	RAD24	P32641	659 aa		4.15	□□□□□ -1.74
SPT6	YGR116W	BYE1	P36106	594 aa		4.15	□□□□□ -1.74
SPT6	YGR116W	NOC2	P39744	710 aa	Known RBP	4.15	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 59.9 ms