RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.33□□□□□ -0.11
RPS3A-206ENST00000507485 MAP3K1Q13233 1512 aa14.33□□□□□ -0.12
RPS3A-206ENST00000507485 UBAP1LF5GYI3 381 aa14.32□□□□□ -0.12
RPS3A-206ENST00000507485 MYOM3Q5VTT5 1437 aa14.32□□□□□ -0.12
RPS3A-206ENST00000507485 TSPY4P0CV99 314 aa14.31□□□□□ -0.12
RPS3A-206ENST00000507485 TSPY10P0CW01 314 aa14.31□□□□□ -0.12
RPS3A-206ENST00000507485 VWDEQ8N2E2 1590 aa14.31□□□□□ -0.12
RPS3A-206ENST00000507485 UGGT1Q9NYU2 1555 aa14.31□□□□□ -0.12
RPS3A-206ENST00000507485 CEP152O94986 1710 aa14.31□□□□□ -0.12
RPS3A-206ENST00000507485 NLRP1Q9C000 1473 aa14.3□□□□□ -0.12
RPS3A-206ENST00000507485 EIF2AK4Q9P2K8 1649 aaKnown RBP14.3□□□□□ -0.12
RPS3A-206ENST00000507485 ZC3H13Q5T200 1668 aaKnown RBP14.29□□□□□ -0.12
RPS3A-206ENST00000507485 PELP1Q8IZL8 1130 aaKnown RBP14.29□□□□□ -0.12
RPS3A-206ENST00000507485 SHANK2Q9UPX8 1470 aa14.29□□□□□ -0.12
RPS3A-206ENST00000507485 ALKQ9UM73 1620 aa14.29□□□□□ -0.12
RPS3A-206ENST00000507485 DEPDC5O75140 1603 aa14.28□□□□□ -0.12
RPS3A-206ENST00000507485 ERVK-7P63135 1459 aa14.28□□□□□ -0.12
RPS3A-206ENST00000507485 ASTLQ6HA08 431 aaPredicted RBP14.28□□□□□ -0.12
RPS3A-206ENST00000507485 STRCP1A6NGW2 1772 aa14.28□□□□□ -0.12
RPS3A-206ENST00000507485 MED14O60244 1454 aa14.27□□□□□ -0.12
RPS3A-206ENST00000507485 CROCC2H7BZ55 1655 aa14.27□□□□□ -0.13
RPS3A-206ENST00000507485 NPHP4O75161 1426 aaPredicted RBP14.27□□□□□ -0.13
RPS3A-206ENST00000507485 CPS1P31327 1500 aa14.26□□□□□ -0.13
RPS3A-206ENST00000507485 CFAP65Q6ZU64 1925 aaKnown RBP14.26□□□□□ -0.13
RPS3A-206ENST00000507485 ABCC5O15440 1437 aa14.26□□□□□ -0.13
RPS3A-206ENST00000507485 ANKLE2Q86XL3 938 aa14.25□□□□□ -0.13
RPS3A-206ENST00000507485 DUOX2Q9NRD8 1548 aa14.25□□□□□ -0.13
RPS3A-206ENST00000507485 IQGAP1P46940 1657 aa14.25□□□□□ -0.13
RPS3A-206ENST00000507485 C7P10643 843 aa14.25□□□□□ -0.13
RPS3A-206ENST00000507485 THEMISQ8N1K5 641 aaPredicted RBP14.25□□□□□ -0.13
RPS3A-206ENST00000507485 SLC39A7Q92504 469 aa14.25□□□□□ -0.13
RPS3A-206ENST00000507485 UBR1Q8IWV7 1749 aa14.24□□□□□ -0.13
RPS3A-206ENST00000507485 PTPN23Q9H3S7 1636 aa14.24□□□□□ -0.13
RPS3A-206ENST00000507485 PRDM15P57071 1507 aaPredicted RBP14.24□□□□□ -0.13
RPS3A-206ENST00000507485 SOCS7O14512 581 aa14.24□□□□□ -0.13
RPS3A-206ENST00000507485 MS4A3Q96HJ5 214 aa14.24□□□□□ -0.13
RPS3A-206ENST00000507485 KIF15Q9NS87 1388 aa14.23□□□□□ -0.13
RPS3A-206ENST00000507485 ATMINO43313 823 aaPredicted RBP14.22□□□□□ -0.13
RPS3A-206ENST00000507485 HSPA1LP34931 641 aa14.22□□□□□ -0.13
RPS3A-206ENST00000507485 METRNQ9UJH8 293 aa14.21□□□□□ -0.13
RPS3A-206ENST00000507485 DAPK1P53355 1430 aa14.21□□□□□ -0.14
RPS3A-206ENST00000507485 PIP4K2BP78356 416 aa14.2□□□□□ -0.14
RPS3A-206ENST00000507485 RRP7BPQ9NSQ0 103 aa14.2□□□□□ -0.14
RPS3A-206ENST00000507485 ARHGAP31Q2M1Z3 1444 aa14.19□□□□□ -0.14
RPS3A-206ENST00000507485 FGD6Q6ZV73 1430 aa14.19□□□□□ -0.14
RPS3A-206ENST00000507485 ERBINQ96RT1 1412 aa14.19□□□□□ -0.14
RPS3A-206ENST00000507485 LRRC7Q96NW7 1537 aa14.19□□□□□ -0.14
RPS3A-206ENST00000507485 POTEMA6NI47 508 aa14.19□□□□□ -0.14
RPS3A-206ENST00000507485 ARHGAP23Q9P227 1491 aa14.19□□□□□ -0.14
RPS3A-206ENST00000507485 LTKP29376 864 aa14.18□□□□□ -0.14
RPS3A-206ENST00000507485 MAMSTRQ6ZN01 415 aa14.18□□□□□ -0.14
RPS3A-206ENST00000507485 PROM2Q8N271 834 aa14.18□□□□□ -0.14
RPS3A-206ENST00000507485 PIK3C2BO00750 1634 aa14.18□□□□□ -0.14
RPS3A-206ENST00000507485 SLIT1O75093 1534 aa14.17□□□□□ -0.14
RPS3A-206ENST00000507485 MED1Q15648 1581 aaPredicted RBP14.17□□□□□ -0.14
RPS3A-206ENST00000507485 SCAF11Q99590 1463 aaKnown RBP14.16□□□□□ -0.14
RPS3A-206ENST00000507485 TOM1O60784 492 aa14.16□□□□□ -0.14
RPS3A-206ENST00000507485 TSPYL2Q9H2G4 693 aaPredicted RBP14.16□□□□□ -0.14
RPS3A-206ENST00000507485 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
RPS3A-206ENST00000507485 XIRP1Q702N8 1843 aaKnown RBP14.15□□□□□ -0.14
RPS3A-206ENST00000507485 POTEGQ6S5H5 508 aa14.15□□□□□ -0.14
RPS3A-206ENST00000507485 SYNMO15061 1565 aa14.15□□□□□ -0.14
RPS3A-206ENST00000507485 LMTK2Q8IWU2 1503 aa14.13□□□□□ -0.15
RPS3A-206ENST00000507485 PCDH10Q9P2E7 1040 aa14.13□□□□□ -0.15
RPS3A-206ENST00000507485 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
RPS3A-206ENST00000507485 TXNDC2Q86VQ3 553 aa14.12□□□□□ -0.15
RPS3A-206ENST00000507485 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
RPS3A-206ENST00000507485 ANKRD30AQ9BXX3 1397 aa14.1□□□□□ -0.15
RPS3A-206ENST00000507485 TMEM2Q9UHN6 1383 aa14.1□□□□□ -0.15
RPS3A-206ENST00000507485 ADGRL2O95490 1459 aa14.1□□□□□ -0.15
RPS3A-206ENST00000507485 EFCAB6Q5THR3 1501 aa14.1□□□□□ -0.15
RPS3A-206ENST00000507485 IDI1Q13907 227 aa14.1□□□□□ -0.15
RPS3A-206ENST00000507485 NOS1P29475 1434 aa14.09□□□□□ -0.15
RPS3A-206ENST00000507485 POTEJP0CG39 1038 aa14.08□□□□□ -0.16
RPS3A-206ENST00000507485 TET3O43151 1660 aa14.08□□□□□ -0.16
RPS3A-206ENST00000507485 KDM5AP29375 1690 aaKnown RBP14.08□□□□□ -0.16
RPS3A-206ENST00000507485 KANK1Q14678 1352 aa14.07□□□□□ -0.16
RPS3A-206ENST00000507485 KIF12Q96FN5 646 aa14.07□□□□□ -0.16
RPS3A-206ENST00000507485 ADGRB3O60242 1522 aa14.06□□□□□ -0.16
RPS3A-206ENST00000507485 ATN1P54259 1190 aaPredicted RBP14.05□□□□□ -0.16
RPS3A-206ENST00000507485 EID1Q9Y6B2 187 aa14.04□□□□□ -0.16
RPS3A-206ENST00000507485 MYO5BQ9ULV0 1848 aa14.04□□□□□ -0.16
RPS3A-206ENST00000507485 FAM50AQ14320 339 aaKnown RBP14.03□□□□□ -0.16
RPS3A-206ENST00000507485 RBM33Q96EV2 1170 aaKnown RBP14.03□□□□□ -0.16
RPS3A-206ENST00000507485 SLC26A8Q96RN1 970 aa14.03□□□□□ -0.16
RPS3A-206ENST00000507485 SCUBE2Q9NQ36 999 aa14.03□□□□□ -0.16
RPS3A-206ENST00000507485 ANKRD50Q9ULJ7 1429 aa14.03□□□□□ -0.16
RPS3A-206ENST00000507485 MIER1Q8N108 512 aa14.02□□□□□ -0.16
RPS3A-206ENST00000507485 TMEM94Q12767 1356 aa14.02□□□□□ -0.17
RPS3A-206ENST00000507485 NWD1Q149M9 1564 aa14.01□□□□□ -0.17
RPS3A-206ENST00000507485 GCC2Q8IWJ2 1684 aa14.01□□□□□ -0.17
RPS3A-206ENST00000507485 ZFYVE9O95405 1425 aa14□□□□□ -0.17
RPS3A-206ENST00000507485 UNC13BO14795 1591 aa14□□□□□ -0.17
RPS3A-206ENST00000507485 KCNA6P17658 529 aa14□□□□□ -0.17
RPS3A-206ENST00000507485 TMEM131LA2VDJ0 1609 aa13.99□□□□□ -0.17
RPS3A-206ENST00000507485 TIE1P35590 1138 aa13.99□□□□□ -0.17
RPS3A-206ENST00000507485 RPRD2Q5VT52 1461 aaKnown RBP13.98□□□□□ -0.17
RPS3A-206ENST00000507485 E9PCH4 1651 aa13.98□□□□□ -0.17
RPS3A-206ENST00000507485 BMP2KQ9NSY1 1161 aaPredicted RBP13.98□□□□□ -0.17
RPS3A-206ENST00000507485 RGS17Q9UGC6 210 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms