RNA–Protein interactions for RNA: ENST00000463427.5

TMEM87B-204, Transcript of transmembrane protein 87B, humanhuman

TSL 3

Gene TMEM87B, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87B-204ENST00000463427 LHX6Q9UPM6 363 aa11.98□□□□□ -0.49
TMEM87B-204ENST00000463427 EN1Q05925 392 aaPredicted RBP11.97□□□□□ -0.49
TMEM87B-204ENST00000463427 LRRC9Q6ZRR7 1453 aa11.96□□□□□ -0.49
TMEM87B-204ENST00000463427 PRIM1P49642 420 aaKnown RBP11.96□□□□□ -0.49
TMEM87B-204ENST00000463427 TPRNQ4KMQ1 711 aa11.96□□□□□ -0.49
TMEM87B-204ENST00000463427 KIAA0556O60303 1618 aa11.96□□□□□ -0.5
TMEM87B-204ENST00000463427 FMN1Q68DA7 1419 aa11.95□□□□□ -0.5
TMEM87B-204ENST00000463427 GPIHBP1Q8IV16 184 aa11.95□□□□□ -0.5
TMEM87B-204ENST00000463427 ZNF454Q8N9F8 522 aa11.95□□□□□ -0.5
TMEM87B-204ENST00000463427 ZDHHC16Q969W1 377 aa11.95□□□□□ -0.5
TMEM87B-204ENST00000463427 SHROOM2Q13796 1616 aa11.94□□□□□ -0.5
TMEM87B-204ENST00000463427 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
TMEM87B-204ENST00000463427 MARVELD3Q96A59 401 aa11.94□□□□□ -0.5
TMEM87B-204ENST00000463427 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
TMEM87B-204ENST00000463427 FHOD3Q2V2M9 1422 aa11.93□□□□□ -0.5
TMEM87B-204ENST00000463427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.92□□□□□ -0.5
TMEM87B-204ENST00000463427 GPR37O15354 613 aa11.92□□□□□ -0.5
TMEM87B-204ENST00000463427 KANK4Q5T7N3 995 aaPredicted RBP11.9□□□□□ -0.5
TMEM87B-204ENST00000463427 BCL2L12Q9HB09 334 aa11.9□□□□□ -0.5
TMEM87B-204ENST00000463427 MAP3K7O43318 606 aa11.89□□□□□ -0.51
TMEM87B-204ENST00000463427 MAGI3Q5TCQ9 1506 aa11.88□□□□□ -0.51
TMEM87B-204ENST00000463427 NUTM2FA1L443 756 aa11.88□□□□□ -0.51
TMEM87B-204ENST00000463427 ZMYND10O75800 440 aa11.88□□□□□ -0.51
TMEM87B-204ENST00000463427 EMP3P54852 163 aa11.88□□□□□ -0.51
TMEM87B-204ENST00000463427 ADAM33Q9BZ11 813 aa11.88□□□□□ -0.51
TMEM87B-204ENST00000463427 FCHSD2O94868 740 aa11.87□□□□□ -0.51
TMEM87B-204ENST00000463427 PTGDRQ13258 359 aa11.87□□□□□ -0.51
TMEM87B-204ENST00000463427 HECW1Q76N89 1606 aa11.86□□□□□ -0.51
TMEM87B-204ENST00000463427 PRKCSHP14314 528 aaPredicted RBP11.86□□□□□ -0.51
TMEM87B-204ENST00000463427 C6orf132Q5T0Z8 1188 aa11.86□□□□□ -0.51
TMEM87B-204ENST00000463427 CERKQ8TCT0 537 aa11.86□□□□□ -0.51
TMEM87B-204ENST00000463427 RBM33Q96EV2 1170 aaKnown RBP11.86□□□□□ -0.51
TMEM87B-204ENST00000463427 ERBB3P21860 1342 aa11.86□□□□□ -0.51
TMEM87B-204ENST00000463427 CCDC18Q5T9S5 1454 aa11.85□□□□□ -0.51
TMEM87B-204ENST00000463427 HIC1Q14526 733 aa11.85□□□□□ -0.51
TMEM87B-204ENST00000463427 BARGINQ6ZT62 677 aa11.85□□□□□ -0.51
TMEM87B-204ENST00000463427 TSR1Q2NL82 804 aaKnown RBP11.84□□□□□ -0.51
TMEM87B-204ENST00000463427 NPDC1Q9NQX5 325 aaPredicted RBP11.84□□□□□ -0.51
TMEM87B-204ENST00000463427 CLASP1Q7Z460 1538 aa11.84□□□□□ -0.51
TMEM87B-204ENST00000463427 EHBP1L1Q8N3D4 1523 aa11.84□□□□□ -0.51
TMEM87B-204ENST00000463427 CHD1O14646 1710 aa11.83□□□□□ -0.52
TMEM87B-204ENST00000463427 CDHR5Q9HBB8 845 aa11.83□□□□□ -0.52
TMEM87B-204ENST00000463427 ABCA8O94911 1581 aa11.83□□□□□ -0.52
TMEM87B-204ENST00000463427 NUP153P49790 1475 aaKnown RBP11.83□□□□□ -0.52
TMEM87B-204ENST00000463427 PHLDB1Q86UU1 1377 aa11.82□□□□□ -0.52
TMEM87B-204ENST00000463427 EPRSP07814 1512 aaKnown RBP11.82□□□□□ -0.52
TMEM87B-204ENST00000463427 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
TMEM87B-204ENST00000463427 ADCY10Q96PN6 1610 aa11.82□□□□□ -0.52
TMEM87B-204ENST00000463427 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
TMEM87B-204ENST00000463427 GNPATO15228 680 aa11.81□□□□□ -0.52
TMEM87B-204ENST00000463427 PTPREP23469 700 aa11.81□□□□□ -0.52
TMEM87B-204ENST00000463427 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
TMEM87B-204ENST00000463427 RBM27Q9P2N5 1060 aaKnown RBP11.81□□□□□ -0.52
TMEM87B-204ENST00000463427 RAPGEF6Q8TEU7 1601 aa11.81□□□□□ -0.52
TMEM87B-204ENST00000463427 KRTAP3-3Q9BYR6 98 aa11.8□□□□□ -0.52
TMEM87B-204ENST00000463427 KRTAP3-2Q9BYR7 98 aa11.8□□□□□ -0.52
TMEM87B-204ENST00000463427 TCOF1Q13428 1488 aaKnown RBP11.8□□□□□ -0.52
TMEM87B-204ENST00000463427 PPP1R3GB7ZBB8 358 aa11.79□□□□□ -0.52
TMEM87B-204ENST00000463427 PBX2P40425 430 aa11.79□□□□□ -0.52
TMEM87B-204ENST00000463427 CCNB3Q8WWL7 1395 aa11.79□□□□□ -0.52
TMEM87B-204ENST00000463427 SUPT6HQ7KZ85 1726 aaKnown RBP11.78□□□□□ -0.52
TMEM87B-204ENST00000463427 ZNF687Q8N1G0 1237 aa11.78□□□□□ -0.52
TMEM87B-204ENST00000463427 FAM205CA6NFA0 338 aa11.77□□□□□ -0.53
TMEM87B-204ENST00000463427 KCNH8Q96L42 1107 aa11.76□□□□□ -0.53
TMEM87B-204ENST00000463427 HS3ST6Q96QI5 342 aa11.76□□□□□ -0.53
TMEM87B-204ENST00000463427 MAP2K5Q13163 448 aa11.75□□□□□ -0.53
TMEM87B-204ENST00000463427 PPARGC1BQ86YN6 1023 aaKnown RBP11.75□□□□□ -0.53
TMEM87B-204ENST00000463427 TTC13Q8NBP0 860 aa11.75□□□□□ -0.53
TMEM87B-204ENST00000463427 MINK1Q8N4C8 1332 aaPredicted RBP11.75□□□□□ -0.53
TMEM87B-204ENST00000463427 NCOA2Q15596 1464 aa11.75□□□□□ -0.53
TMEM87B-204ENST00000463427 ARHGAP33O14559 1287 aa11.74□□□□□ -0.53
TMEM87B-204ENST00000463427 COL9A1P20849 921 aa11.74□□□□□ -0.53
TMEM87B-204ENST00000463427 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
TMEM87B-204ENST00000463427 FGD6Q6ZV73 1430 aa11.74□□□□□ -0.53
TMEM87B-204ENST00000463427 PRSS12P56730 875 aa11.73□□□□□ -0.53
TMEM87B-204ENST00000463427 MYOM3Q5VTT5 1437 aa11.73□□□□□ -0.53
TMEM87B-204ENST00000463427 AKNAQ7Z591 1439 aa11.72□□□□□ -0.53
TMEM87B-204ENST00000463427 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
TMEM87B-204ENST00000463427 POTEEQ6S8J3 1075 aa11.72□□□□□ -0.53
TMEM87B-204ENST00000463427 SLC4A5Q9BY07 1137 aa11.72□□□□□ -0.53
TMEM87B-204ENST00000463427 CDK13Q14004 1512 aaKnown RBP11.71□□□□□ -0.53
TMEM87B-204ENST00000463427 MIA2Q96PC5 1412 aa11.71□□□□□ -0.53
TMEM87B-204ENST00000463427 ONECUT3O60422 494 aaPredicted RBP11.71□□□□□ -0.53
TMEM87B-204ENST00000463427 CLSPNQ9HAW4 1339 aa11.7□□□□□ -0.54
TMEM87B-204ENST00000463427 IRF6O14896 467 aa11.7□□□□□ -0.54
TMEM87B-204ENST00000463427 FECHP22830 423 aa11.7□□□□□ -0.54
TMEM87B-204ENST00000463427 CDCA7LQ96GN5 454 aa11.7□□□□□ -0.54
TMEM87B-204ENST00000463427 AK7Q96M32 723 aa11.7□□□□□ -0.54
TMEM87B-204ENST00000463427 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
TMEM87B-204ENST00000463427 KRI1Q8N9T8 703 aaKnown RBP11.69□□□□□ -0.54
TMEM87B-204ENST00000463427 SLC24A3Q9HC58 644 aa11.69□□□□□ -0.54
TMEM87B-204ENST00000463427 ABCC10Q5T3U5 1492 aa11.69□□□□□ -0.54
TMEM87B-204ENST00000463427 ZBED2Q9BTP6 218 aa11.68□□□□□ -0.54
TMEM87B-204ENST00000463427 PLB1Q6P1J6 1458 aa11.68□□□□□ -0.54
TMEM87B-204ENST00000463427 PTPRKQ15262 1439 aa11.68□□□□□ -0.54
TMEM87B-204ENST00000463427 CARMIL2Q6F5E8 1435 aa11.68□□□□□ -0.54
TMEM87B-204ENST00000463427 PTPN23Q9H3S7 1636 aa11.68□□□□□ -0.54
TMEM87B-204ENST00000463427 PSEN2P49810 448 aa11.67□□□□□ -0.54
TMEM87B-204ENST00000463427 UHRF1BP1LA0JNW5 1464 aa11.67□□□□□ -0.54
TMEM87B-204ENST00000463427 KDM5BQ9UGL1 1544 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms