RNA–Protein interactions for RNA: ENST00000463427.5

TMEM87B-204, Transcript of transmembrane protein 87B, humanhuman

TSL 3

Gene TMEM87B, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87B-204ENST00000463427 AEBP2Q6ZN18 517 aaPredicted RBP26.52■■□□□ 1.84
TMEM87B-204ENST00000463427 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.78
TMEM87B-204ENST00000463427 PHF23Q9BUL5 403 aaPredicted RBP22.96■■□□□ 1.27
TMEM87B-204ENST00000463427 SENP3Q9H4L4 574 aaPredicted RBP22.58■■□□□ 1.21
TMEM87B-204ENST00000463427 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
TMEM87B-204ENST00000463427 FOXD1Q16676 465 aa21.14■□□□□ 0.97
TMEM87B-204ENST00000463427 POTEDQ86YR6 584 aa20.27■□□□□ 0.84
TMEM87B-204ENST00000463427 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
TMEM87B-204ENST00000463427 ADRA2BP18089 450 aa20.14■□□□□ 0.81
TMEM87B-204ENST00000463427 MSH5O43196 834 aa19.91■□□□□ 0.78
TMEM87B-204ENST00000463427 PIAS4Q8N2W9 510 aaPredicted RBP19.68■□□□□ 0.74
TMEM87B-204ENST00000463427 PPP4R3CPQ6ZMV5 832 aa18.76■□□□□ 0.59
TMEM87B-204ENST00000463427 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
TMEM87B-204ENST00000463427 KCNA4P22459 653 aa18.51■□□□□ 0.55
TMEM87B-204ENST00000463427 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
TMEM87B-204ENST00000463427 CNKSR2Q8WXI2 1034 aa18.24■□□□□ 0.51
TMEM87B-204ENST00000463427 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
TMEM87B-204ENST00000463427 NPM3O75607 178 aaKnown RBP18.06■□□□□ 0.48
TMEM87B-204ENST00000463427 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
TMEM87B-204ENST00000463427 RNF216Q9NWF9 866 aaPredicted RBP17.86■□□□□ 0.45
TMEM87B-204ENST00000463427 HOXD11P31277 338 aaPredicted RBP17.75■□□□□ 0.43
TMEM87B-204ENST00000463427 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
TMEM87B-204ENST00000463427 NISCHQ9Y2I1 1504 aa17.72■□□□□ 0.43
TMEM87B-204ENST00000463427 SLC4A1APQ9BWU0 796 aaKnown RBP17.67■□□□□ 0.42
TMEM87B-204ENST00000463427 CACNB1Q02641 598 aaPredicted RBP17.36■□□□□ 0.37
TMEM87B-204ENST00000463427 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
TMEM87B-204ENST00000463427 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
TMEM87B-204ENST00000463427 DCAF8L1A6NGE4 600 aa17.07■□□□□ 0.32
TMEM87B-204ENST00000463427 ZBTB22O15209 634 aa17.04■□□□□ 0.32
TMEM87B-204ENST00000463427 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
TMEM87B-204ENST00000463427 SLC4A2P04920 1241 aa17.01■□□□□ 0.31
TMEM87B-204ENST00000463427 RNF39Q9H2S5 420 aa16.99■□□□□ 0.31
TMEM87B-204ENST00000463427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.81■□□□□ 0.28
TMEM87B-204ENST00000463427 MYCNP04198 464 aaPredicted RBP16.72■□□□□ 0.27
TMEM87B-204ENST00000463427 C1QBPQ07021 282 aaKnown RBP16.69■□□□□ 0.26
TMEM87B-204ENST00000463427 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
TMEM87B-204ENST00000463427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.52■□□□□ 0.24
TMEM87B-204ENST00000463427 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
TMEM87B-204ENST00000463427 ATXN8OSP0DMR3 200 aa16.51■□□□□ 0.23
TMEM87B-204ENST00000463427 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
TMEM87B-204ENST00000463427 APLP2Q06481 763 aa16.32■□□□□ 0.2
TMEM87B-204ENST00000463427 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
TMEM87B-204ENST00000463427 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
TMEM87B-204ENST00000463427 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
TMEM87B-204ENST00000463427 CAPN15O75808 1086 aa15.95■□□□□ 0.14
TMEM87B-204ENST00000463427 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
TMEM87B-204ENST00000463427 POTEHQ6S545 545 aa15.77■□□□□ 0.12
TMEM87B-204ENST00000463427 DSG3P32926 999 aa15.75■□□□□ 0.11
TMEM87B-204ENST00000463427 POLA2Q14181 598 aa15.72■□□□□ 0.11
TMEM87B-204ENST00000463427 ABCB7O75027 752 aa15.63■□□□□ 0.09
TMEM87B-204ENST00000463427 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
TMEM87B-204ENST00000463427 FBLN2P98095 1184 aa15.55■□□□□ 0.08
TMEM87B-204ENST00000463427 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.08
TMEM87B-204ENST00000463427 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.08
TMEM87B-204ENST00000463427 FKBP8Q14318 412 aa15.4■□□□□ 0.06
TMEM87B-204ENST00000463427 SPDYE4A6NLX3 237 aa15.26■□□□□ 0.03
TMEM87B-204ENST00000463427 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
TMEM87B-204ENST00000463427 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
TMEM87B-204ENST00000463427 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
TMEM87B-204ENST00000463427 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
TMEM87B-204ENST00000463427 PROM2Q8N271 834 aa15.15■□□□□ 0.02
TMEM87B-204ENST00000463427 SSUH2Q9Y2M2 353 aa15.08■□□□□ 0
TMEM87B-204ENST00000463427 ZNF692Q9BU19 519 aaPredicted RBP15.05■□□□□ -0
TMEM87B-204ENST00000463427 RBM42Q9BTD8 480 aaKnown RBP15.01□□□□□ -0.01
TMEM87B-204ENST00000463427 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
TMEM87B-204ENST00000463427 FBXO3Q9UK99 471 aa14.91□□□□□ -0.02
TMEM87B-204ENST00000463427 CHRDL2Q6WN34 429 aa14.87□□□□□ -0.03
TMEM87B-204ENST00000463427 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
TMEM87B-204ENST00000463427 PABPN1Q86U42 306 aaKnown RBP eCLIP14.86□□□□□ -0.03
TMEM87B-204ENST00000463427 AKT1S1Q96B36 256 aa14.86□□□□□ -0.03
TMEM87B-204ENST00000463427 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
TMEM87B-204ENST00000463427 MYO15BQ96JP2 1530 aa14.68□□□□□ -0.06
TMEM87B-204ENST00000463427 REM2Q8IYK8 340 aaPredicted RBP14.67□□□□□ -0.06
TMEM87B-204ENST00000463427 VASPP50552 380 aaPredicted RBP14.66□□□□□ -0.06
TMEM87B-204ENST00000463427 SPDYE1Q8NFV5 336 aaPredicted RBP14.65□□□□□ -0.06
TMEM87B-204ENST00000463427 SP7Q8TDD2 431 aaPredicted RBP14.56□□□□□ -0.08
TMEM87B-204ENST00000463427 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
TMEM87B-204ENST00000463427 IFNLR1Q8IU57 520 aaPredicted RBP14.45□□□□□ -0.1
TMEM87B-204ENST00000463427 CLEC11AQ9Y240 323 aa14.45□□□□□ -0.1
TMEM87B-204ENST00000463427 AMER1Q5JTC6 1135 aaPredicted RBP14.44□□□□□ -0.1
TMEM87B-204ENST00000463427 PIP4P2Q8N4L2 257 aa14.43□□□□□ -0.1
TMEM87B-204ENST00000463427 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
TMEM87B-204ENST00000463427 PLCD3Q8N3E9 789 aa14.41□□□□□ -0.1
TMEM87B-204ENST00000463427 MIER1Q8N108 512 aa14.4□□□□□ -0.1
TMEM87B-204ENST00000463427 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
TMEM87B-204ENST00000463427 ZBTB47Q9UFB7 747 aaPredicted RBP14.34□□□□□ -0.11
TMEM87B-204ENST00000463427 NACADO15069 1562 aa14.32□□□□□ -0.12
TMEM87B-204ENST00000463427 RTN4Q9NQC3 1192 aaKnown RBP14.32□□□□□ -0.12
TMEM87B-204ENST00000463427 CREBZFQ9NS37 354 aa14.3□□□□□ -0.12
TMEM87B-204ENST00000463427 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.12
TMEM87B-204ENST00000463427 KLHL34Q8N239 644 aa14.29□□□□□ -0.12
TMEM87B-204ENST00000463427 SPOCK2Q92563 424 aa14.27□□□□□ -0.13
TMEM87B-204ENST00000463427 HAX1O00165 279 aa14.26□□□□□ -0.13
TMEM87B-204ENST00000463427 MNX1P50219 401 aaPredicted RBP14.21□□□□□ -0.13
TMEM87B-204ENST00000463427 EVX2Q03828 476 aa14.13□□□□□ -0.15
TMEM87B-204ENST00000463427 ABCC9O60706 1549 aa14.13□□□□□ -0.15
TMEM87B-204ENST00000463427 PRKAR2AP13861 404 aaKnown RBP14.1□□□□□ -0.15
TMEM87B-204ENST00000463427 NPM1P06748 294 aaKnown RBP eCLIP14.09□□□□□ -0.15
TMEM87B-204ENST00000463427 NUBP1P53384 320 aa14.09□□□□□ -0.15
TMEM87B-204ENST00000463427 CHADLQ6NUI6 762 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms