RNA–Protein interactions for RNA: ENSMUST00000089915.9

Casc4-203, Transcript of Protein CASC4, mousemouse

TSL 2 BASIC

Gene Casc4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-203ENSMUST00000089915 Pelp1Q9DBD5 1123 aaKnown RBP18.84■□□□□ 0.61
Casc4-203ENSMUST00000089915 Prkrip1Q9CWV6 186 aaKnown RBP18.83■□□□□ 0.61
Casc4-203ENSMUST00000089915 Kif16bB1AVY7 1312 aa18.83■□□□□ 0.61
Casc4-203ENSMUST00000089915 Sbno1Q689Z5 1390 aa18.82■□□□□ 0.6
Casc4-203ENSMUST00000089915 Fam184bQ0KK56 942 aa18.82■□□□□ 0.6
Casc4-203ENSMUST00000089915 Ipo9Q91YE6 1041 aa18.81■□□□□ 0.6
Casc4-203ENSMUST00000089915 Pola1P33609 1465 aa18.81■□□□□ 0.6
Casc4-203ENSMUST00000089915 Kif3bQ61771 747 aa18.8■□□□□ 0.6
Casc4-203ENSMUST00000089915 Nsd2Q8BVE8 1365 aa18.8■□□□□ 0.6
Casc4-203ENSMUST00000089915 Myo5cE9Q1F5 1742 aa18.79■□□□□ 0.6
Casc4-203ENSMUST00000089915 Uggt2E9Q4X2 1504 aa18.79■□□□□ 0.6
Casc4-203ENSMUST00000089915 Stk24Q99KH8 431 aa18.77■□□□□ 0.6
Casc4-203ENSMUST00000089915 Upf2A2AT37 1269 aaKnown RBP18.76■□□□□ 0.59
Casc4-203ENSMUST00000089915 Rab3gap2Q8BMG7 1366 aa18.76■□□□□ 0.59
Casc4-203ENSMUST00000089915 TnikP83510 1323 aa18.76■□□□□ 0.59
Casc4-203ENSMUST00000089915 Ttll13A4Q9F6 804 aa18.75■□□□□ 0.59
Casc4-203ENSMUST00000089915 Gm20521D3Z5F7 333 aa18.75■□□□□ 0.59
Casc4-203ENSMUST00000089915 ChgaP26339 463 aaKnown RBP18.75■□□□□ 0.59
Casc4-203ENSMUST00000089915 Apbb1Q9QXJ1 710 aa18.74■□□□□ 0.59
Casc4-203ENSMUST00000089915 Ylpm1Q9R0I7 1386 aaKnown RBP18.74■□□□□ 0.59
Casc4-203ENSMUST00000089915 NeflP08551 543 aa18.74■□□□□ 0.59
Casc4-203ENSMUST00000089915 Prdm10Q3UTQ7 1184 aa18.74■□□□□ 0.59
Casc4-203ENSMUST00000089915 Fan1Q69ZT1 1020 aa18.74■□□□□ 0.59
Casc4-203ENSMUST00000089915 Os9Q8K2C7 672 aa18.74■□□□□ 0.59
Casc4-203ENSMUST00000089915 Ttc21bQ0HA38 1315 aa18.74■□□□□ 0.59
Casc4-203ENSMUST00000089915 Fndc1E9Q043 1732 aa18.74■□□□□ 0.59
Casc4-203ENSMUST00000089915 Abca9Q8K449 1623 aa18.74■□□□□ 0.59
Casc4-203ENSMUST00000089915 Abca6Q8K441 1624 aa18.73■□□□□ 0.59
Casc4-203ENSMUST00000089915 B4galnt3Q6L8S8 986 aa18.73■□□□□ 0.59
Casc4-203ENSMUST00000089915 Kif7B7ZNG0 1348 aa18.73■□□□□ 0.59
Casc4-203ENSMUST00000089915 Arid3cA6PWV5 409 aa18.73■□□□□ 0.59
Casc4-203ENSMUST00000089915 Zfyve16Q80U44 1528 aa18.72■□□□□ 0.59
Casc4-203ENSMUST00000089915 Myo3aQ8K3H5 1613 aa18.72■□□□□ 0.59
Casc4-203ENSMUST00000089915 Arid4bA2CG63 1314 aaKnown RBP18.72■□□□□ 0.59
Casc4-203ENSMUST00000089915 Nos1Q9Z0J4 1429 aa18.72■□□□□ 0.59
Casc4-203ENSMUST00000089915 Col17a1Q07563 1470 aa18.72■□□□□ 0.59
Casc4-203ENSMUST00000089915 Clasp1Q80TV8 1535 aaKnown RBP18.72■□□□□ 0.59
Casc4-203ENSMUST00000089915 AnkarA2RT91 1465 aa18.71■□□□□ 0.59
Casc4-203ENSMUST00000089915 Tmem131lQ3U3D7 1597 aa18.71■□□□□ 0.59
Casc4-203ENSMUST00000089915 Usp19Q3UJD6 1360 aa18.71■□□□□ 0.59
Casc4-203ENSMUST00000089915 Usp40Q8BWR4 1235 aa18.71■□□□□ 0.59
Casc4-203ENSMUST00000089915 Itsn2Q9Z0R6 1659 aa18.7■□□□□ 0.58
Casc4-203ENSMUST00000089915 Ttc41Q692V3 1318 aa18.7■□□□□ 0.58
Casc4-203ENSMUST00000089915 Gas2l2Q5SSG4 860 aa18.7■□□□□ 0.58
Casc4-203ENSMUST00000089915 Neurod2Q62414 383 aa18.7■□□□□ 0.58
Casc4-203ENSMUST00000089915 Dcaf11Q91VU6 549 aa18.7■□□□□ 0.58
Casc4-203ENSMUST00000089915 Ythdc2B2RR83 1445 aaKnown RBP18.69■□□□□ 0.58
Casc4-203ENSMUST00000089915 Kdm2bQ6P1G2 1309 aa18.69■□□□□ 0.58
Casc4-203ENSMUST00000089915 Dbr1Q923B1 550 aa18.68■□□□□ 0.58
Casc4-203ENSMUST00000089915 Gtf2e1Q9D0D5 440 aa18.68■□□□□ 0.58
Casc4-203ENSMUST00000089915 AatkQ80YE4 1365 aa18.68■□□□□ 0.58
Casc4-203ENSMUST00000089915 Speer4f1Q9D5Q6 258 aa18.68■□□□□ 0.58
Casc4-203ENSMUST00000089915 Iqgap3F8VQ29 1632 aa18.68■□□□□ 0.58
Casc4-203ENSMUST00000089915 Atf7ipQ7TT18 1306 aa18.68■□□□□ 0.58
Casc4-203ENSMUST00000089915 Cnga1P29974 684 aa18.67■□□□□ 0.58
Casc4-203ENSMUST00000089915 PtprtQ99M80 1454 aa18.67■□□□□ 0.58
Casc4-203ENSMUST00000089915 Cdk5rap2Q8K389 1822 aa18.66■□□□□ 0.58
Casc4-203ENSMUST00000089915 ErbinQ80TH2 1402 aa18.66■□□□□ 0.58
Casc4-203ENSMUST00000089915 Kiaa1107Q80TK0 1369 aa18.65■□□□□ 0.58
Casc4-203ENSMUST00000089915 Kdm5aQ3UXZ9 1690 aa18.65■□□□□ 0.58
Casc4-203ENSMUST00000089915 Igf1rQ60751 1373 aa18.65■□□□□ 0.58
Casc4-203ENSMUST00000089915 Abca8aQ8K442 1620 aa18.64■□□□□ 0.58
Casc4-203ENSMUST00000089915 Ccdc27Q3V036 639 aa18.64■□□□□ 0.57
Casc4-203ENSMUST00000089915 Rwdd1Q9CQK7 243 aa18.64■□□□□ 0.57
Casc4-203ENSMUST00000089915 Srpk2O54781 681 aaKnown RBP18.63■□□□□ 0.57
Casc4-203ENSMUST00000089915 Ccdc30Q8BVF4 654 aa18.63■□□□□ 0.57
Casc4-203ENSMUST00000089915 Myom1Q62234 1667 aaKnown RBP18.63■□□□□ 0.57
Casc4-203ENSMUST00000089915 Cep152A2AUM9 1736 aaKnown RBP18.63■□□□□ 0.57
Casc4-203ENSMUST00000089915 Plekhh1Q80TI1 1356 aa18.62■□□□□ 0.57
Casc4-203ENSMUST00000089915 Prex1Q69ZK0 1650 aa18.62■□□□□ 0.57
Casc4-203ENSMUST00000089915 Rims1Q99NE5 1463 aa18.61■□□□□ 0.57
Casc4-203ENSMUST00000089915 Lemd3Q9WU40 921 aa18.61■□□□□ 0.57
Casc4-203ENSMUST00000089915 Znf518aB2RRF6 1478 aaKnown RBP18.61■□□□□ 0.57
Casc4-203ENSMUST00000089915 P2rx7Q9Z1M0 595 aa18.61■□□□□ 0.57
Casc4-203ENSMUST00000089915 Hdac5Q9Z2V6 1113 aa18.61■□□□□ 0.57
Casc4-203ENSMUST00000089915 Nlrp6Q91WS2 869 aa18.6■□□□□ 0.57
Casc4-203ENSMUST00000089915 Tspyl2Q7TQI8 677 aa18.6■□□□□ 0.57
Casc4-203ENSMUST00000089915 Iqcf3Q9D498 203 aa18.6■□□□□ 0.57
Casc4-203ENSMUST00000089915 Nphp4P59240 1425 aa18.6■□□□□ 0.57
Casc4-203ENSMUST00000089915 Nkx1-2P42580 305 aa18.58■□□□□ 0.56
Casc4-203ENSMUST00000089915 Puf60Q3UEB3 564 aaKnown RBP18.57■□□□□ 0.56
Casc4-203ENSMUST00000089915 AU022751B1B0V2 589 aa18.57■□□□□ 0.56
Casc4-203ENSMUST00000089915 Adgrb3Q80ZF8 1522 aa18.56■□□□□ 0.56
Casc4-203ENSMUST00000089915 Ehbp1l1Q99MS7 1716 aa18.55■□□□□ 0.56
Casc4-203ENSMUST00000089915 Uspl1Q3ULM6 1089 aa18.55■□□□□ 0.56
Casc4-203ENSMUST00000089915 Golga2Q921M4 999 aa18.55■□□□□ 0.56
Casc4-203ENSMUST00000089915 Atxn3Q9CVD2 355 aa18.55■□□□□ 0.56
Casc4-203ENSMUST00000089915 PrkcshO08795 521 aa18.55■□□□□ 0.56
Casc4-203ENSMUST00000089915 Trpm1Q2TV84 1622 aa18.55■□□□□ 0.56
Casc4-203ENSMUST00000089915 Talpid3E9PV87 1520 aa18.54■□□□□ 0.56
Casc4-203ENSMUST00000089915 Mbd3Q9Z2D8 285 aaKnown RBP18.54■□□□□ 0.56
Casc4-203ENSMUST00000089915 Sipa1l1Q8C0T5 1782 aa18.54■□□□□ 0.56
Casc4-203ENSMUST00000089915 Gprasp1Q5U4C1 1347 aa18.53■□□□□ 0.56
Casc4-203ENSMUST00000089915 DnmbpQ6TXD4 1580 aa18.53■□□□□ 0.56
Casc4-203ENSMUST00000089915 Efcab6Q6P1E8 1516 aa18.52■□□□□ 0.56
Casc4-203ENSMUST00000089915 Chmp5Q9D7S9 219 aa18.52■□□□□ 0.55
Casc4-203ENSMUST00000089915 Prdm2A2A7B5 1709 aaKnown RBP18.52■□□□□ 0.55
Casc4-203ENSMUST00000089915 Topbp1Q6ZQF0 1515 aa18.52■□□□□ 0.55
Casc4-203ENSMUST00000089915 Smc5Q8CG46 1101 aaKnown RBP18.51■□□□□ 0.55
Casc4-203ENSMUST00000089915 Ptch1Q61115 1434 aa18.51■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms