Protein–RNA interactions for Protein: Q8K441

Abca6, ATP-binding cassette sub-family A member 6, mousemouse

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca6Q8K441 Gm25239-201ENSMUST00000174915 86 ntBASIC58.91■■■■■ 7.02
Abca6Q8K441 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC55■■■■■ 6.4
Abca6Q8K441 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC53.8■■■■■ 6.2
Abca6Q8K441 Gm24109-201ENSMUST00000175489 103 ntBASIC51.61■■■■■ 5.85
Abca6Q8K441 Gm15042-201ENSMUST00000120212 883 ntBASIC50.71■■■■■ 5.71
Abca6Q8K441 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC49.84■■■■■ 5.57
Abca6Q8K441 Gm15045-201ENSMUST00000117359 883 ntBASIC49.63■■■■■ 5.54
Abca6Q8K441 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC49.58■■■■■ 5.53
Abca6Q8K441 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC49.5■■■■■ 5.51
Abca6Q8K441 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC49.4■■■■■ 5.5
Abca6Q8K441 Gm23366-201ENSMUST00000175022 89 ntBASIC49.02■■■■■ 5.44
Abca6Q8K441 AC153911.1-202ENSMUST00000218534 1034 ntBASIC48.31■■■■■ 5.32
Abca6Q8K441 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC47.84■■■■■ 5.25
Abca6Q8K441 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC47.81■■■■■ 5.24
Abca6Q8K441 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC47.78■■■■■ 5.24
Abca6Q8K441 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC47.57■■■■■ 5.21
Abca6Q8K441 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC47.43■■■■■ 5.18
Abca6Q8K441 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC47.21■■■■■ 5.15
Abca6Q8K441 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC47.01■■■■■ 5.12
Abca6Q8K441 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC46.8■■■■■ 5.08
Abca6Q8K441 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC46.79■■■■■ 5.08
Abca6Q8K441 Gm25238-201ENSMUST00000174914 89 ntBASIC46.75■■■■■ 5.07
Abca6Q8K441 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC46.72■■■■■ 5.07
Abca6Q8K441 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC46.68■■■■■ 5.06
Abca6Q8K441 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC45.9■■■■■ 4.94
Abca6Q8K441 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC45.79■■■■■ 4.92
Abca6Q8K441 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC45.78■■■■■ 4.92
Abca6Q8K441 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC45.58■■■■■ 4.89
Abca6Q8K441 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC45.5■■■■■ 4.87
Abca6Q8K441 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC45.36■■■■■ 4.85
Abca6Q8K441 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC45.27■■■■■ 4.84
Abca6Q8K441 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC45.26■■■■■ 4.84
Abca6Q8K441 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC45.13■■■■■ 4.82
Abca6Q8K441 Gm25262-201ENSMUST00000174934 133 ntBASIC45.06■■■■■ 4.8
Abca6Q8K441 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC45.04■■■■■ 4.8
Abca6Q8K441 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC44.95■■■■■ 4.79
Abca6Q8K441 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC44.95■■■■■ 4.79
Abca6Q8K441 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC44.9■■■■■ 4.78
Abca6Q8K441 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC44.64■■■■■ 4.74
Abca6Q8K441 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC44.64■■■■■ 4.74
Abca6Q8K441 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC44.53■■■■■ 4.72
Abca6Q8K441 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC44.48■■■■■ 4.71
Abca6Q8K441 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC44.45■■■■■ 4.71
Abca6Q8K441 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC44.39■■■■■ 4.7
Abca6Q8K441 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC44.36■■■■■ 4.69
Abca6Q8K441 Gm26115-201ENSMUST00000175605 87 ntBASIC44.33■■■■■ 4.69
Abca6Q8K441 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC44.33■■■■■ 4.69
Abca6Q8K441 Gm27325-201ENSMUST00000175467 74 ntBASIC44.23■■■■■ 4.67
Abca6Q8K441 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC44.19■■■■■ 4.66
Abca6Q8K441 Gm8109-201ENSMUST00000194076 746 ntBASIC44.13■■■■■ 4.65
Abca6Q8K441 Rab21-202ENSMUST00000218831 843 ntBASIC43.98■■■■■ 4.63
Abca6Q8K441 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC43.93■■■■■ 4.62
Abca6Q8K441 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC43.91■■■■■ 4.62
Abca6Q8K441 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC43.9■■■■■ 4.62
Abca6Q8K441 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC43.88■■■■■ 4.62
Abca6Q8K441 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC43.87■■■■■ 4.61
Abca6Q8K441 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC43.74■■■■■ 4.59
Abca6Q8K441 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC43.69■■■■■ 4.58
Abca6Q8K441 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC43.57■■■■■ 4.56
Abca6Q8K441 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC43.55■■■■■ 4.56
Abca6Q8K441 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC43.52■■■■■ 4.56
Abca6Q8K441 Psd-208ENSMUST00000224556 2034 ntBASIC43.36■■■■■ 4.53
Abca6Q8K441 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC43.27■■■■■ 4.52
Abca6Q8K441 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC43.27■■■■■ 4.52
Abca6Q8K441 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC43.19■■■■■ 4.5
Abca6Q8K441 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC43.17■■■■■ 4.5
Abca6Q8K441 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC43.1■■■■■ 4.49
Abca6Q8K441 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC42.95■■■■■ 4.47
Abca6Q8K441 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC42.92■■■■■ 4.46
Abca6Q8K441 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC42.86■■■■■ 4.45
Abca6Q8K441 Gm17082-201ENSMUST00000166043 1091 ntBASIC42.77■■■■■ 4.44
Abca6Q8K441 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC42.77■■■■■ 4.44
Abca6Q8K441 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC42.72■■■■■ 4.43
Abca6Q8K441 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC42.71■■■■■ 4.43
Abca6Q8K441 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC42.68■■■■■ 4.42
Abca6Q8K441 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC42.6■■■■■ 4.41
Abca6Q8K441 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC42.58■■■■■ 4.41
Abca6Q8K441 Gm24804-201ENSMUST00000174982 85 ntBASIC42.56■■■■■ 4.4
Abca6Q8K441 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC42.53■■■■■ 4.4
Abca6Q8K441 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC42.49■■■■■ 4.39
Abca6Q8K441 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC42.47■■■■■ 4.39
Abca6Q8K441 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC42.46■■■■■ 4.39
Abca6Q8K441 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC42.3■■■■■ 4.36
Abca6Q8K441 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC42.3■■■■■ 4.36
Abca6Q8K441 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC42.21■■■■■ 4.35
Abca6Q8K441 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC42.18■■■■■ 4.34
Abca6Q8K441 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC42.14■■■■■ 4.34
Abca6Q8K441 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC42.07■■■■■ 4.32
Abca6Q8K441 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC42.03■■■■■ 4.32
Abca6Q8K441 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC42.02■■■■■ 4.32
Abca6Q8K441 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC42.02■■■■■ 4.32
Abca6Q8K441 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC42.02■■■■■ 4.32
Abca6Q8K441 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC41.98■■■■■ 4.31
Abca6Q8K441 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC41.97■■■■■ 4.31
Abca6Q8K441 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC41.97■■■■■ 4.31
Abca6Q8K441 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC41.97■■■■■ 4.31
Abca6Q8K441 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC41.95■■■■■ 4.31
Abca6Q8K441 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC41.95■■■■■ 4.31
Abca6Q8K441 Zfp131-205ENSMUST00000223812 663 ntBASIC41.93■■■■■ 4.3
Abca6Q8K441 Gm27322-201ENSMUST00000184007 104 ntBASIC41.9■■■■■ 4.3
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms