RNA–Protein interactions for RNA: ENSMUST00000089915.9

Casc4-203, Transcript of Protein CASC4, mousemouse

TSL 2 BASIC

Gene Casc4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-203ENSMUST00000089915 NischQ80TM9 1593 aa27.28■■□□□ 1.96
Casc4-203ENSMUST00000089915 Gm35339A0A140LHH9 1649 aa26.67■■□□□ 1.86
Casc4-203ENSMUST00000089915 Abcc9P70170 1546 aa26.49■■□□□ 1.83
Casc4-203ENSMUST00000089915 Abcc8B2RUS7 1588 aa25.89■■□□□ 1.73
Casc4-203ENSMUST00000089915 Rhox8Q6VSS7 320 aa25.5■■□□□ 1.67
Casc4-203ENSMUST00000089915 Rtl1Q7M732 1744 aa24.97■■□□□ 1.59
Casc4-203ENSMUST00000089915 Ccdc180J3QNE4 1664 aa24.64■■□□□ 1.54
Casc4-203ENSMUST00000089915 Zcchc6Q5BLK4 1491 aaKnown RBP24.38■■□□□ 1.49
Casc4-203ENSMUST00000089915 ScribQ80U72 1612 aa24.14■■□□□ 1.46
Casc4-203ENSMUST00000089915 Dcaf1Q80TR8 1506 aa23.99■■□□□ 1.43
Casc4-203ENSMUST00000089915 Rb1cc1Q9ESK9 1588 aa23.92■■□□□ 1.42
Casc4-203ENSMUST00000089915 Ccdc136Q3TVA9 1136 aa23.74■■□□□ 1.39
Casc4-203ENSMUST00000089915 Kdm5dQ62240 1548 aa23.68■■□□□ 1.38
Casc4-203ENSMUST00000089915 Baz1aO88379 1555 aa23.6■■□□□ 1.37
Casc4-203ENSMUST00000089915 HrcG5E8J6 738 aa23.51■■□□□ 1.35
Casc4-203ENSMUST00000089915 Ehmt2Q9Z148 1263 aaKnown RBP23.49■■□□□ 1.35
Casc4-203ENSMUST00000089915 Rpgrip1Q9EPQ2 1331 aa23.42■■□□□ 1.34
Casc4-203ENSMUST00000089915 NacadQ5SWP3 1504 aa23.33■■□□□ 1.33
Casc4-203ENSMUST00000089915 Acin1Q9JIX8 1338 aaKnown RBP23.31■■□□□ 1.32
Casc4-203ENSMUST00000089915 Trim41Q5NCC3 630 aa23.16■■□□□ 1.3
Casc4-203ENSMUST00000089915 Smarca2Q6DIC0 1577 aa23.12■■□□□ 1.29
Casc4-203ENSMUST00000089915 Crybg2B7ZCC2 1516 aa23■■□□□ 1.27
Casc4-203ENSMUST00000089915 Sycp2Q9CUU3 1500 aa22.88■■□□□ 1.25
Casc4-203ENSMUST00000089915 Cep164Q5DU05 1446 aa22.82■■□□□ 1.24
Casc4-203ENSMUST00000089915 Chic1Q8CBW7 227 aa22.69■■□□□ 1.22
Casc4-203ENSMUST00000089915 Cecr2E9Q2Z1 1453 aa22.68■■□□□ 1.22
Casc4-203ENSMUST00000089915 Rsf1E9PWW9 1441 aaKnown RBP22.65■■□□□ 1.22
Casc4-203ENSMUST00000089915 Cngb1E1AZ71 1325 aa22.6■■□□□ 1.21
Casc4-203ENSMUST00000089915 Pcgf6Q99NA9 353 aa22.52■■□□□ 1.2
Casc4-203ENSMUST00000089915 Gab3Q8BSM5 595 aa22.51■■□□□ 1.19
Casc4-203ENSMUST00000089915 Ccdc88bQ4QRL3 1481 aa22.5■■□□□ 1.19
Casc4-203ENSMUST00000089915 BicraF8VPZ9 1578 aa22.47■■□□□ 1.19
Casc4-203ENSMUST00000089915 Brd4Q9ESU6 1400 aaKnown RBP22.47■■□□□ 1.19
Casc4-203ENSMUST00000089915 Synj1Q8CHC4 1574 aa22.45■■□□□ 1.19
Casc4-203ENSMUST00000089915 Golga3P55937 1487 aa22.38■■□□□ 1.17
Casc4-203ENSMUST00000089915 CftrP26361 1476 aa22.24■■□□□ 1.15
Casc4-203ENSMUST00000089915 Supt5hO55201 1082 aaKnown RBP22.22■■□□□ 1.15
Casc4-203ENSMUST00000089915 Top2bQ64511 1612 aa22.14■■□□□ 1.13
Casc4-203ENSMUST00000089915 Esf1Q3V1V3 845 aaKnown RBP22.12■■□□□ 1.13
Casc4-203ENSMUST00000089915 Mier1Q5UAK0 511 aa22.03■■□□□ 1.12
Casc4-203ENSMUST00000089915 Cttnbp2B9EJA2 1648 aa22.02■■□□□ 1.12
Casc4-203ENSMUST00000089915 Cc2d2aQ8CFW7 1633 aa22.01■■□□□ 1.11
Casc4-203ENSMUST00000089915 Zeb1Q64318 1117 aa21.9■■□□□ 1.1
Casc4-203ENSMUST00000089915 Smarca4Q3TKT4 1613 aaKnown RBP21.9■■□□□ 1.1
Casc4-203ENSMUST00000089915 Rapgef2Q8CHG7 1496 aa21.79■■□□□ 1.08
Casc4-203ENSMUST00000089915 NefmP08553 848 aa21.75■■□□□ 1.07
Casc4-203ENSMUST00000089915 Top2aQ01320 1528 aaKnown RBP21.72■■□□□ 1.07
Casc4-203ENSMUST00000089915 Fmn1Q05860 1466 aa21.7■■□□□ 1.06
Casc4-203ENSMUST00000089915 UbtfP25976 765 aaKnown RBP21.68■■□□□ 1.06
Casc4-203ENSMUST00000089915 Neurod1Q60867 357 aa21.65■■□□□ 1.06
Casc4-203ENSMUST00000089915 Sall2Q9QX96 1004 aa21.65■■□□□ 1.06
Casc4-203ENSMUST00000089915 Iqgap2Q3UQ44 1575 aa21.62■■□□□ 1.05
Casc4-203ENSMUST00000089915 Cep162Q6ZQ06 1403 aa21.62■■□□□ 1.05
Casc4-203ENSMUST00000089915 Myt1lP97500 1187 aa21.59■■□□□ 1.05
Casc4-203ENSMUST00000089915 Aebp2Q9Z248 504 aaKnown RBP21.44■■□□□ 1.02
Casc4-203ENSMUST00000089915 Eif4g1Q6NZJ6 1600 aaKnown RBP21.44■■□□□ 1.02
Casc4-203ENSMUST00000089915 Npm2Q80W85 207 aa21.4■■□□□ 1.02
Casc4-203ENSMUST00000089915 Atad2bE9Q166 1460 aaKnown RBP21.4■■□□□ 1.02
Casc4-203ENSMUST00000089915 Plekhg3Q4VAC9 1341 aa21.35■■□□□ 1.01
Casc4-203ENSMUST00000089915 TnnQ80Z71 1560 aa21.34■■□□□ 1.01
Casc4-203ENSMUST00000089915 Clip1Q922J3 1391 aa21.31■■□□□ 1
Casc4-203ENSMUST00000089915 PtprkP35822 1457 aa21.3■■□□□ 1
Casc4-203ENSMUST00000089915 Ppargc1bQ8VHJ7 1014 aa21.27■□□□□ 0.99
Casc4-203ENSMUST00000089915 Arhgap35Q91YM2 1499 aa21.24■□□□□ 0.99
Casc4-203ENSMUST00000089915 Wdr66E9Q743 1299 aa21.24■□□□□ 0.99
Casc4-203ENSMUST00000089915 Frmpd1A2AKB4 1549 aa21.23■□□□□ 0.99
Casc4-203ENSMUST00000089915 Pds5bQ4VA53 1446 aaKnown RBP21.2■□□□□ 0.98
Casc4-203ENSMUST00000089915 Ncapd3Q6ZQK0 1506 aa21.19■□□□□ 0.98
Casc4-203ENSMUST00000089915 Las1lA2BE28 776 aaKnown RBP21.18■□□□□ 0.98
Casc4-203ENSMUST00000089915 Wdr62Q3U3T8 1523 aa21.15■□□□□ 0.98
Casc4-203ENSMUST00000089915 Il27Q8K3I6 234 aa21.13■□□□□ 0.97
Casc4-203ENSMUST00000089915 Arap1Q4LDD4 1452 aa21.13■□□□□ 0.97
Casc4-203ENSMUST00000089915 NrkQ9R0G8 1455 aa21.12■□□□□ 0.97
Casc4-203ENSMUST00000089915 Lamc3Q9R0B6 1581 aa21.09■□□□□ 0.97
Casc4-203ENSMUST00000089915 Ap3b1Q9Z1T1 1105 aa21.09■□□□□ 0.97
Casc4-203ENSMUST00000089915 TonslQ6NZL6 1363 aa21.07■□□□□ 0.96
Casc4-203ENSMUST00000089915 Unc13aQ4KUS2 1712 aa21.06■□□□□ 0.96
Casc4-203ENSMUST00000089915 ClspnQ80YR7 1315 aa21.06■□□□□ 0.96
Casc4-203ENSMUST00000089915 Kif15Q6P9L6 1387 aa21.04■□□□□ 0.96
Casc4-203ENSMUST00000089915 Anks4bQ8K3X6 423 aa21■□□□□ 0.95
Casc4-203ENSMUST00000089915 Eea1Q8BL66 1411 aa20.99■□□□□ 0.95
Casc4-203ENSMUST00000089915 Shroom4Q1W617 1475 aa20.99■□□□□ 0.95
Casc4-203ENSMUST00000089915 Camsap1A2AHC3 1581 aa20.99■□□□□ 0.95
Casc4-203ENSMUST00000089915 Arhgef5E9Q7D5 1581 aa20.98■□□□□ 0.95
Casc4-203ENSMUST00000089915 Kdm5bQ80Y84 1544 aa20.96■□□□□ 0.95
Casc4-203ENSMUST00000089915 Setd5Q5XJV7 1441 aa20.94■□□□□ 0.94
Casc4-203ENSMUST00000089915 Csrnp3P59055 597 aa20.93■□□□□ 0.94
Casc4-203ENSMUST00000089915 Eid3Q3V124 375 aa20.92■□□□□ 0.94
Casc4-203ENSMUST00000089915 AqrQ8CFQ3 1481 aaKnown RBP20.9■□□□□ 0.94
Casc4-203ENSMUST00000089915 Nop58Q6DFW4 536 aaKnown RBP20.9■□□□□ 0.94
Casc4-203ENSMUST00000089915 Grin2bQ01097 1482 aa20.87■□□□□ 0.93
Casc4-203ENSMUST00000089915 Map3k1P53349 1493 aa20.86■□□□□ 0.93
Casc4-203ENSMUST00000089915 Cdk11bP24788 784 aaKnown RBP20.86■□□□□ 0.93
Casc4-203ENSMUST00000089915 Ercc6F8VPZ5 1481 aa20.84■□□□□ 0.93
Casc4-203ENSMUST00000089915 Mroh2bQ7M6Y6 1581 aa20.83■□□□□ 0.92
Casc4-203ENSMUST00000089915 Ccdc18Q640L5 1455 aa20.82■□□□□ 0.92
Casc4-203ENSMUST00000089915 Tiam1Q60610 1591 aa20.82■□□□□ 0.92
Casc4-203ENSMUST00000089915 1700123L14RikQ3V2K7 440 aa20.81■□□□□ 0.92
Casc4-203ENSMUST00000089915 Ankrd26Q811D2 1581 aa20.81■□□□□ 0.92
Casc4-203ENSMUST00000089915 Naip1Q9QWK5 1403 aa20.79■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms