Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm25239-201ENSMUST00000174915 86 ntBASIC43.87■■■■■ 4.61
Smc5Q8CG46 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC43.6■■■■■ 4.57
Smc5Q8CG46 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC42.11■■■■■ 4.33
Smc5Q8CG46 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC42.06■■■■■ 4.32
Smc5Q8CG46 Psd-208ENSMUST00000224556 2034 ntBASIC40.81■■■■■ 4.12
Smc5Q8CG46 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC40.08■■■■■ 4.01
Smc5Q8CG46 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.05■■■■■ 4
Smc5Q8CG46 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC39.84■■■■□ 3.97
Smc5Q8CG46 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC39.67■■■■□ 3.94
Smc5Q8CG46 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
Smc5Q8CG46 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
Smc5Q8CG46 Gm15042-201ENSMUST00000120212 883 ntBASIC39.36■■■■□ 3.89
Smc5Q8CG46 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
Smc5Q8CG46 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
Smc5Q8CG46 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
Smc5Q8CG46 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.97■■■■□ 3.83
Smc5Q8CG46 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
Smc5Q8CG46 Gm15045-201ENSMUST00000117359 883 ntBASIC38.78■■■■□ 3.8
Smc5Q8CG46 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC38.41■■■■□ 3.74
Smc5Q8CG46 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
Smc5Q8CG46 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC38.15■■■■□ 3.7
Smc5Q8CG46 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC38.02■■■■□ 3.68
Smc5Q8CG46 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.01■■■■□ 3.67
Smc5Q8CG46 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC37.86■■■■□ 3.65
Smc5Q8CG46 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
Smc5Q8CG46 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.83■■■■□ 3.65
Smc5Q8CG46 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37.76■■■■□ 3.63
Smc5Q8CG46 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.74■■■■□ 3.63
Smc5Q8CG46 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
Smc5Q8CG46 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC37.66■■■■□ 3.62
Smc5Q8CG46 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
Smc5Q8CG46 Gm24109-201ENSMUST00000175489 103 ntBASIC37.63■■■■□ 3.61
Smc5Q8CG46 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC37.58■■■■□ 3.61
Smc5Q8CG46 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37.55■■■■□ 3.6
Smc5Q8CG46 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC37.39■■■■□ 3.58
Smc5Q8CG46 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
Smc5Q8CG46 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.32■■■■□ 3.56
Smc5Q8CG46 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC37.29■■■■□ 3.56
Smc5Q8CG46 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.96■■■■□ 3.51
Smc5Q8CG46 Gm10524-201ENSMUST00000181931 1893 ntBASIC36.93■■■■□ 3.5
Smc5Q8CG46 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
Smc5Q8CG46 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Smc5Q8CG46 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.85■■■■□ 3.49
Smc5Q8CG46 Gm23366-201ENSMUST00000175022 89 ntBASIC36.73■■■■□ 3.47
Smc5Q8CG46 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
Smc5Q8CG46 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Smc5Q8CG46 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC36.54■■■■□ 3.44
Smc5Q8CG46 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
Smc5Q8CG46 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
Smc5Q8CG46 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Smc5Q8CG46 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Smc5Q8CG46 Gm42596-201ENSMUST00000196305 1958 ntBASIC36.22■■■■□ 3.39
Smc5Q8CG46 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.21■■■■□ 3.39
Smc5Q8CG46 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.15■■■■□ 3.38
Smc5Q8CG46 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Smc5Q8CG46 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36.12■■■■□ 3.37
Smc5Q8CG46 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Smc5Q8CG46 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Smc5Q8CG46 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Smc5Q8CG46 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC36.03■■■■□ 3.36
Smc5Q8CG46 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC36.02■■■■□ 3.36
Smc5Q8CG46 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC35.98■■■■□ 3.35
Smc5Q8CG46 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC35.95■■■■□ 3.34
Smc5Q8CG46 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.93■■■■□ 3.34
Smc5Q8CG46 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Smc5Q8CG46 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Smc5Q8CG46 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC35.75■■■■□ 3.31
Smc5Q8CG46 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.71■■■■□ 3.31
Smc5Q8CG46 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
Smc5Q8CG46 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.57■■■■□ 3.29
Smc5Q8CG46 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Smc5Q8CG46 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
Smc5Q8CG46 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.46■■■■□ 3.27
Smc5Q8CG46 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.41■■■■□ 3.26
Smc5Q8CG46 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Smc5Q8CG46 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Smc5Q8CG46 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC35.31■■■■□ 3.24
Smc5Q8CG46 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Smc5Q8CG46 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC35.13■■■■□ 3.21
Smc5Q8CG46 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Smc5Q8CG46 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Smc5Q8CG46 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
Smc5Q8CG46 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC34.95■■■■□ 3.19
Smc5Q8CG46 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Smc5Q8CG46 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC34.9■■■■□ 3.18
Smc5Q8CG46 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
Smc5Q8CG46 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
Smc5Q8CG46 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
Smc5Q8CG46 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
Smc5Q8CG46 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Smc5Q8CG46 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
Smc5Q8CG46 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
Smc5Q8CG46 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC34.76■■■■□ 3.15
Smc5Q8CG46 Gm27325-201ENSMUST00000175467 74 ntBASIC34.75■■■■□ 3.15
Smc5Q8CG46 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC34.73■■■■□ 3.15
Smc5Q8CG46 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
Smc5Q8CG46 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Smc5Q8CG46 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.65■■■■□ 3.14
Smc5Q8CG46 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Smc5Q8CG46 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms