RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C SPS100P13130 326 aa6.66□□□□□ -1.34
PUP3YER094C SEN2P16658 377 aa6.66□□□□□ -1.34
PUP3YER094C SPC29P33419 253 aa6.66□□□□□ -1.34
PUP3YER094C LAG1P38703 411 aa6.66□□□□□ -1.34
PUP3YER094C LNP1P38878 278 aa6.66□□□□□ -1.34
PUP3YER094C CCS1P40202 249 aaKnown RBP6.66□□□□□ -1.34
PUP3YER094C UBP8P50102 471 aa6.66□□□□□ -1.34
PUP3YER094C SLX9P53251 210 aaPredicted RBP6.66□□□□□ -1.34
PUP3YER094C SMX3P54999 86 aaPredicted RBP6.66□□□□□ -1.34
PUP3YER094C SED1Q01589 338 aa6.66□□□□□ -1.34
PUP3YER094C TSA2Q04120 196 aa6.66□□□□□ -1.34
PUP3YER094C YDR114CQ04597 100 aa6.66□□□□□ -1.34
PUP3YER094C RTT103Q05543 409 aa6.66□□□□□ -1.34
PUP3YER094C UPS1Q05776 175 aa6.66□□□□□ -1.34
PUP3YER094C VAM3Q12241 283 aa6.66□□□□□ -1.34
PUP3YER094C TRA1P38811 3744 aa6.65□□□□□ -1.34
PUP3YER094C GAL1P04385 528 aa6.65□□□□□ -1.34
PUP3YER094C PUT1P09368 476 aa6.65□□□□□ -1.34
PUP3YER094C CKA1P15790 372 aa6.65□□□□□ -1.34
PUP3YER094C TRR1P29509 319 aaKnown RBP6.65□□□□□ -1.34
PUP3YER094C VMA8P32610 256 aaKnown RBP6.65□□□□□ -1.34
PUP3YER094C YER121WP40076 114 aa6.65□□□□□ -1.34
PUP3YER094C BMT5P40493 336 aa6.65□□□□□ -1.34
PUP3YER094C QRI1P43123 477 aaKnown RBP6.65□□□□□ -1.34
PUP3YER094C BNA2P47125 453 aa6.65□□□□□ -1.34
PUP3YER094C ECM27P47144 725 aa6.65□□□□□ -1.34
PUP3YER094C SOL1P50278 321 aa6.65□□□□□ -1.34
PUP3YER094C NIF3P53081 288 aa6.65□□□□□ -1.34
PUP3YER094C FEX1Q08913 375 aa6.65□□□□□ -1.34
PUP3YER094C YLR108CQ12259 485 aa6.65□□□□□ -1.34
PUP3YER094C WHI5Q12416 295 aa6.65□□□□□ -1.34
PUP3YER094C TPI1P00942 248 aaKnown RBP6.64□□□□□ -1.35
PUP3YER094C RPL43AP0CX25 92 aaKnown RBP6.64□□□□□ -1.35
PUP3YER094C RPL43BP0CX26 92 aa6.64□□□□□ -1.35
PUP3YER094C STF2P16965 84 aa6.64□□□□□ -1.35
PUP3YER094C CKS1P20486 150 aaKnown RBP6.64□□□□□ -1.35
PUP3YER094C DAL80P26343 269 aa6.64□□□□□ -1.35
PUP3YER094C MTR2P34232 184 aaKnown RBP6.64□□□□□ -1.35
PUP3YER094C SHM2P37291 469 aaKnown RBP6.64□□□□□ -1.35
PUP3YER094C SWD3P38123 315 aa6.64□□□□□ -1.35
PUP3YER094C NTC20P38302 140 aaPredicted RBP6.64□□□□□ -1.35
PUP3YER094C ECM14P38836 430 aa6.64□□□□□ -1.35
PUP3YER094C RMD6P39975 231 aa6.64□□□□□ -1.35
PUP3YER094C SWM2P40342 146 aa6.64□□□□□ -1.35
PUP3YER094C NRG1Q03125 231 aa6.64□□□□□ -1.35
PUP3YER094C CAC2Q04199 468 aa6.64□□□□□ -1.35
PUP3YER094C COA4Q05809 96 aa6.64□□□□□ -1.35
PUP3YER094C YLR224WQ05947 369 aa6.64□□□□□ -1.35
PUP3YER094C LIP2Q06005 328 aa6.64□□□□□ -1.35
PUP3YER094C YTH1Q06102 208 aaPredicted RBP6.64□□□□□ -1.35
PUP3YER094C YNG1Q08465 219 aa6.64□□□□□ -1.35
PUP3YER094C YLR365WQ7LIF2 110 aa6.64□□□□□ -1.35
PUP3YER094C RPL39P04650 51 aa6.63□□□□□ -1.35
PUP3YER094C OLE1P21147 510 aaKnown RBP6.63□□□□□ -1.35
PUP3YER094C MAG1P22134 296 aaKnown RBP6.63□□□□□ -1.35
PUP3YER094C MIR1P23641 311 aaKnown RBP6.63□□□□□ -1.35
PUP3YER094C YOX1P34161 385 aa6.63□□□□□ -1.35
PUP3YER094C SWD2P36104 329 aaPredicted RBP6.63□□□□□ -1.35
PUP3YER094C OSH7P38755 437 aa6.63□□□□□ -1.35
PUP3YER094C AIM46P38885 310 aa6.63□□□□□ -1.35
PUP3YER094C YIR035CP40579 254 aa6.63□□□□□ -1.35
PUP3YER094C GON7P46984 123 aa6.63□□□□□ -1.35
PUP3YER094C MEH1Q02205 184 aa6.63□□□□□ -1.35
PUP3YER094C THI74Q04083 370 aa6.63□□□□□ -1.35
PUP3YER094C FRE8Q12209 686 aa6.63□□□□□ -1.35
PUP3YER094C BBP1Q12365 385 aa6.63□□□□□ -1.35
PUP3YER094C YOR192C-CQ3E736 78 aa6.63□□□□□ -1.35
PUP3YER094C TIP1P27654 210 aaPredicted RBP6.62□□□□□ -1.35
PUP3YER094C MNS1P32906 549 aa6.62□□□□□ -1.35
PUP3YER094C RPB7P34087 171 aa6.62□□□□□ -1.35
PUP3YER094C GLY1P37303 387 aaKnown RBP6.62□□□□□ -1.35
PUP3YER094C PHM8P40025 321 aa6.62□□□□□ -1.35
PUP3YER094C IRC24P40580 263 aa6.62□□□□□ -1.35
PUP3YER094C RPA34P47006 233 aaPredicted RBP6.62□□□□□ -1.35
PUP3YER094C GMC1Q04399 608 aa6.62□□□□□ -1.35
PUP3YER094C FIT1Q04433 528 aa6.62□□□□□ -1.35
PUP3YER094C DPB4Q04603 196 aaKnown RBP6.62□□□□□ -1.35
PUP3YER094C QCR2P07257 368 aa6.61□□□□□ -1.35
PUP3YER094C FUS3P16892 353 aaKnown RBP6.61□□□□□ -1.35
PUP3YER094C YCR061WP25639 631 aa6.61□□□□□ -1.35
PUP3YER094C PAC2P39937 518 aa6.61□□□□□ -1.35
PUP3YER094C JAC1P53193 184 aa6.61□□□□□ -1.35
PUP3YER094C YOL118CQ08259 102 aa6.61□□□□□ -1.35
PUP3YER094C YCT1Q12235 531 aa6.61□□□□□ -1.35
PUP3YER094C YGL194C-AQ2V2P6 80 aa6.61□□□□□ -1.35
PUP3YER094C YJR112W-AQ3E743 109 aa6.61□□□□□ -1.35
PUP3YER094C YPR108W-AQ3E7B3 70 aa6.61□□□□□ -1.35
PUP3YER094C BPH1P25356 2167 aa6.6□□□□□ -1.35
PUP3YER094C VMA3P25515 160 aa6.6□□□□□ -1.35
PUP3YER094C MRP20P32387 263 aa6.6□□□□□ -1.35
PUP3YER094C YKL187CP34231 750 aa6.6□□□□□ -1.35
PUP3YER094C YPC1P38298 316 aa6.6□□□□□ -1.35
PUP3YER094C PCL7P40186 285 aa6.6□□□□□ -1.35
PUP3YER094C YNL046WP53956 172 aa6.6□□□□□ -1.35
PUP3YER094C HSK3P69852 69 aa6.6□□□□□ -1.35
PUP3YER094C TIM10P87108 93 aa6.6□□□□□ -1.35
PUP3YER094C RIM9Q04734 239 aa6.6□□□□□ -1.35
PUP3YER094C NOC4Q06512 552 aaPredicted RBP6.6□□□□□ -1.35
PUP3YER094C SWT1Q12104 458 aa6.6□□□□□ -1.35
PUP3YER094C RFM1Q12192 310 aa6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 224.5 ms