Protein–RNA interactions for Protein: P47006

RPA34, DNA-directed RNA polymerase I subunit RPA34, yeastyeast

Predicted RBP Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA34P47006 NSR1YGR159C 1245 nt17.12■□□□□ 0.33
RPA34P47006 YML009W-BYML009W-B 477 nt16.92■□□□□ 0.3
RPA34P47006 NOP1YDL014W 984 nt16.36■□□□□ 0.21
RPA34P47006 MDJ1YFL016C 1536 nt15.46■□□□□ 0.07
RPA34P47006 YKL036CYKL036C 393 nt14.76□□□□□ -0.05
RPA34P47006 YJL027CYJL027C 417 nt14.29□□□□□ -0.12
RPA34P47006 SRX1YKL086W 384 nt14.26□□□□□ -0.13
RPA34P47006 Q0297Q0297 156 nt14.17□□□□□ -0.14
RPA34P47006 YCR051WYCR051W 669 nt13.52□□□□□ -0.25
RPA34P47006 DBP2YNL112W 1641 nt13.51□□□□□ -0.25
RPA34P47006 SSA3YBL075C 1950 nt13.32□□□□□ -0.28
RPA34P47006 YBR190WYBR190W 312 nt13.31□□□□□ -0.28
RPA34P47006 SCS3YGL126W 1143 nt13.23□□□□□ -0.29
RPA34P47006 TRN1tP(UGG)A 72 nt13.06□□□□□ -0.32
RPA34P47006 SUF9tP(UGG)F 72 nt13.06□□□□□ -0.32
RPA34P47006 SUF8tP(UGG)H 72 nt13.06□□□□□ -0.32
RPA34P47006 tP(UGG)LtP(UGG)L 72 nt13.06□□□□□ -0.32
RPA34P47006 SUF7tP(UGG)M 72 nt13.06□□□□□ -0.32
RPA34P47006 tP(UGG)N1tP(UGG)N1 72 nt13.06□□□□□ -0.32
RPA34P47006 tP(UGG)N2tP(UGG)N2 72 nt13.06□□□□□ -0.32
RPA34P47006 tP(UGG)O1tP(UGG)O1 72 nt13.06□□□□□ -0.32
RPA34P47006 SUF11tP(UGG)O2 72 nt13.06□□□□□ -0.32
RPA34P47006 RTC3YHR087W 336 nt13.01□□□□□ -0.33
RPA34P47006 CCC1YLR220W 969 nt12.95□□□□□ -0.34
RPA34P47006 YOL085CYOL085C 342 nt12.76□□□□□ -0.37
RPA34P47006 RVS167YDR388W 1449 nt12.73□□□□□ -0.37
RPA34P47006 RPP1BYDL130W 321 nt12.72□□□□□ -0.37
RPA34P47006 PKP1YIL042C 1185 nt12.61□□□□□ -0.39
RPA34P47006 SCJ1YMR214W 1134 nt12.5□□□□□ -0.41
RPA34P47006 PUT4YOR348C 1884 nt12.28□□□□□ -0.44
RPA34P47006 tP(UGG)O3tP(UGG)O3 72 nt12.25□□□□□ -0.45
RPA34P47006 PET122YER153C 765 nt12.17□□□□□ -0.46
RPA34P47006 SHR5YOL110W 714 nt12.17□□□□□ -0.46
RPA34P47006 URN1YPR152C 1398 nt12.04□□□□□ -0.48
RPA34P47006 SCR1SCR1 522 nt12.01□□□□□ -0.49
RPA34P47006 ARE1YCR048W 1833 nt11.96□□□□□ -0.49
RPA34P47006 Q0182Q0182 405 nt11.93□□□□□ -0.5
RPA34P47006 OPI9YLR338W 858 nt11.93□□□□□ -0.5
RPA34P47006 DEP1YAL013W 1218 nt11.92□□□□□ -0.5
RPA34P47006 SAH1YER043C 1350 nt11.92□□□□□ -0.5
RPA34P47006 POA1YBR022W 534 nt11.89□□□□□ -0.51
RPA34P47006 YDJ1YNL064C 1230 nt11.88□□□□□ -0.51
RPA34P47006 YHR049C-AYHR049C-A 297 nt11.84□□□□□ -0.51
RPA34P47006 RPN10YHR200W 807 nt11.84□□□□□ -0.51
RPA34P47006 RRN5YLR141W 1092 nt11.79□□□□□ -0.52
RPA34P47006 ATS1YAL020C 1002 nt11.74□□□□□ -0.53
RPA34P47006 YNL208WYNL208W 600 nt11.73□□□□□ -0.53
RPA34P47006 BSC6YOL137W 1494 nt11.7□□□□□ -0.54
RPA34P47006 GAR1YHR089C 618 nt11.65□□□□□ -0.54
RPA34P47006 PUN1YLR414C 792 nt11.6□□□□□ -0.55
RPA34P47006 BUD23YCR047C 828 nt11.57□□□□□ -0.56
RPA34P47006 YER088W-BYER088W-B 147 nt11.55□□□□□ -0.56
RPA34P47006 PTC2YER089C 1395 nt11.49□□□□□ -0.57
RPA34P47006 YJR018WYJR018W 363 nt11.47□□□□□ -0.57
RPA34P47006 RSB1YOR049C 1065 nt11.47□□□□□ -0.57
RPA34P47006 NAB2YGL122C 1578 nt11.41□□□□□ -0.58
RPA34P47006 YJL225CYJL225C 5277 nt11.36□□□□□ -0.59
RPA34P47006 SPT5YML010W 3192 nt11.36□□□□□ -0.59
RPA34P47006 SSA4YER103W 1929 nt11.33□□□□□ -0.6
RPA34P47006 RDN37-1RDN37-1 5354 nt11.31□□□□□ -0.6
RPA34P47006 RDN37-2RDN37-2 5354 nt11.31□□□□□ -0.6
RPA34P47006 PAC11YDR488C 1602 nt11.31□□□□□ -0.6
RPA34P47006 TIR1YER011W 765 nt11.29□□□□□ -0.6
RPA34P47006 RPP2BYDR382W 333 nt11.19□□□□□ -0.62
RPA34P47006 DAL1YIR027C 1383 nt11.18□□□□□ -0.62
RPA34P47006 SSA1YAL005C 1929 nt11.18□□□□□ -0.62
RPA34P47006 FPR4YLR449W 1179 nt11.16□□□□□ -0.62
RPA34P47006 NVJ2YPR091C 2313 nt11.15□□□□□ -0.62
RPA34P47006 FIS1YIL065C 468 nt11.15□□□□□ -0.62
RPA34P47006 YJR120WYJR120W 351 nt11.15□□□□□ -0.62
RPA34P47006 MOT3YMR070W 1473 nt11.14□□□□□ -0.63
RPA34P47006 INM2YDR287W 879 nt11.13□□□□□ -0.63
RPA34P47006 PHO4YFR034C 939 nt11.06□□□□□ -0.64
RPA34P47006 BDF1YLR399C 2061 nt11.02□□□□□ -0.65
RPA34P47006 MEP2YNL142W 1500 nt11.01□□□□□ -0.65
RPA34P47006 YPS1YLR120C 1710 nt10.96□□□□□ -0.65
RPA34P47006 YBL100CYBL100C 315 nt10.95□□□□□ -0.66
RPA34P47006 PST2YDR032C 597 nt10.92□□□□□ -0.66
RPA34P47006 YHR165W-AYHR165W-A 312 nt10.9□□□□□ -0.66
RPA34P47006 BDH2YAL061W 1254 nt10.88□□□□□ -0.67
RPA34P47006 TAT1YBR069C 1860 nt10.87□□□□□ -0.67
RPA34P47006 SRB2YHR041C 633 nt10.87□□□□□ -0.67
RPA34P47006 FPS1YLL043W 2010 nt10.84□□□□□ -0.67
RPA34P47006 YDR095CYDR095C 411 nt10.84□□□□□ -0.67
RPA34P47006 DCW1YKL046C 1350 nt10.81□□□□□ -0.68
RPA34P47006 FUN26YAL022C 1554 nt10.79□□□□□ -0.68
RPA34P47006 TRM9YML014W 840 nt10.75□□□□□ -0.69
RPA34P47006 ALF1YNL148C 765 nt10.75□□□□□ -0.69
RPA34P47006 WWM1YFL010C 636 nt10.71□□□□□ -0.69
RPA34P47006 YMR090WYMR090W 684 nt10.71□□□□□ -0.69
RPA34P47006 EMI2YDR516C 1503 nt10.69□□□□□ -0.7
RPA34P47006 LSM3YLR438C-A 270 nt10.68□□□□□ -0.7
RPA34P47006 RPP2AYOL039W 321 nt10.65□□□□□ -0.7
RPA34P47006 CCT6YDR188W 1641 nt10.62□□□□□ -0.71
RPA34P47006 SUF2tP(AGG)C 72 nt10.61□□□□□ -0.71
RPA34P47006 SUF10tP(AGG)N 72 nt10.61□□□□□ -0.71
RPA34P47006 YGR021WYGR021W 873 nt10.6□□□□□ -0.71
RPA34P47006 YDL221WYDL221W 552 nt10.59□□□□□ -0.71
RPA34P47006 PTP1YDL230W 1008 nt10.59□□□□□ -0.71
RPA34P47006 YBR220CYBR220C 1683 nt10.58□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms