Protein–RNA interactions for Protein: P38123

SWD3, COMPASS component SWD3, yeastyeast

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWD3P38123 NSR1YGR159C 1245 nt17.2■□□□□ 0.34
SWD3P38123 YML009W-BYML009W-B 477 nt17.09■□□□□ 0.33
SWD3P38123 NOP1YDL014W 984 nt16.54■□□□□ 0.24
SWD3P38123 MDJ1YFL016C 1536 nt15.47■□□□□ 0.07
SWD3P38123 YKL036CYKL036C 393 nt15.05■□□□□ -0
SWD3P38123 SRX1YKL086W 384 nt14.45□□□□□ -0.1
SWD3P38123 Q0297Q0297 156 nt14.42□□□□□ -0.1
SWD3P38123 YJL027CYJL027C 417 nt14.26□□□□□ -0.13
SWD3P38123 YCR051WYCR051W 669 nt13.68□□□□□ -0.22
SWD3P38123 DBP2YNL112W 1641 nt13.62□□□□□ -0.23
SWD3P38123 SCS3YGL126W 1143 nt13.58□□□□□ -0.24
SWD3P38123 YBR190WYBR190W 312 nt13.26□□□□□ -0.29
SWD3P38123 TRN1tP(UGG)A 72 nt13.19□□□□□ -0.3
SWD3P38123 SUF9tP(UGG)F 72 nt13.19□□□□□ -0.3
SWD3P38123 SUF8tP(UGG)H 72 nt13.19□□□□□ -0.3
SWD3P38123 tP(UGG)LtP(UGG)L 72 nt13.19□□□□□ -0.3
SWD3P38123 SUF7tP(UGG)M 72 nt13.19□□□□□ -0.3
SWD3P38123 tP(UGG)N1tP(UGG)N1 72 nt13.19□□□□□ -0.3
SWD3P38123 tP(UGG)N2tP(UGG)N2 72 nt13.19□□□□□ -0.3
SWD3P38123 tP(UGG)O1tP(UGG)O1 72 nt13.19□□□□□ -0.3
SWD3P38123 SUF11tP(UGG)O2 72 nt13.19□□□□□ -0.3
SWD3P38123 CCC1YLR220W 969 nt13.06□□□□□ -0.32
SWD3P38123 YOL085CYOL085C 342 nt13.06□□□□□ -0.32
SWD3P38123 RPP1BYDL130W 321 nt12.93□□□□□ -0.34
SWD3P38123 RTC3YHR087W 336 nt12.93□□□□□ -0.34
SWD3P38123 PKP1YIL042C 1185 nt12.88□□□□□ -0.35
SWD3P38123 RVS167YDR388W 1449 nt12.71□□□□□ -0.37
SWD3P38123 SCJ1YMR214W 1134 nt12.63□□□□□ -0.39
SWD3P38123 tP(UGG)O3tP(UGG)O3 72 nt12.42□□□□□ -0.42
SWD3P38123 PET122YER153C 765 nt12.38□□□□□ -0.43
SWD3P38123 SHR5YOL110W 714 nt12.24□□□□□ -0.45
SWD3P38123 PUT4YOR348C 1884 nt12.21□□□□□ -0.45
SWD3P38123 SCR1SCR1 522 nt12.17□□□□□ -0.46
SWD3P38123 ATS1YAL020C 1002 nt12.1□□□□□ -0.47
SWD3P38123 URN1YPR152C 1398 nt12.04□□□□□ -0.48
SWD3P38123 YDJ1YNL064C 1230 nt12.02□□□□□ -0.49
SWD3P38123 RRN5YLR141W 1092 nt12.01□□□□□ -0.49
SWD3P38123 DEP1YAL013W 1218 nt11.97□□□□□ -0.49
SWD3P38123 ARE1YCR048W 1833 nt11.93□□□□□ -0.5
SWD3P38123 SSA3YBL075C 1950 nt11.91□□□□□ -0.5
SWD3P38123 OPI9YLR338W 858 nt11.91□□□□□ -0.5
SWD3P38123 SAH1YER043C 1350 nt11.9□□□□□ -0.5
SWD3P38123 POA1YBR022W 534 nt11.82□□□□□ -0.52
SWD3P38123 RPN10YHR200W 807 nt11.79□□□□□ -0.52
SWD3P38123 YER088W-BYER088W-B 147 nt11.78□□□□□ -0.52
SWD3P38123 GAR1YHR089C 618 nt11.78□□□□□ -0.52
SWD3P38123 YNL208WYNL208W 600 nt11.76□□□□□ -0.53
SWD3P38123 YHR049C-AYHR049C-A 297 nt11.75□□□□□ -0.53
SWD3P38123 RSB1YOR049C 1065 nt11.67□□□□□ -0.54
SWD3P38123 BSC6YOL137W 1494 nt11.59□□□□□ -0.55
SWD3P38123 PUN1YLR414C 792 nt11.55□□□□□ -0.56
SWD3P38123 YJR018WYJR018W 363 nt11.47□□□□□ -0.57
SWD3P38123 PTC2YER089C 1395 nt11.46□□□□□ -0.57
SWD3P38123 BUD23YCR047C 828 nt11.46□□□□□ -0.57
SWD3P38123 TIR1YER011W 765 nt11.4□□□□□ -0.58
SWD3P38123 NAB2YGL122C 1578 nt11.33□□□□□ -0.6
SWD3P38123 SSA1YAL005C 1929 nt11.31□□□□□ -0.6
SWD3P38123 YJR120WYJR120W 351 nt11.27□□□□□ -0.61
SWD3P38123 PST2YDR032C 597 nt11.26□□□□□ -0.61
SWD3P38123 SPT5YML010W 3192 nt11.25□□□□□ -0.61
SWD3P38123 RPP2BYDR382W 333 nt11.16□□□□□ -0.62
SWD3P38123 FIS1YIL065C 468 nt11.15□□□□□ -0.62
SWD3P38123 DAL1YIR027C 1383 nt11.15□□□□□ -0.63
SWD3P38123 INM2YDR287W 879 nt11.1□□□□□ -0.63
SWD3P38123 SRB2YHR041C 633 nt11.1□□□□□ -0.63
SWD3P38123 FPR4YLR449W 1179 nt11.1□□□□□ -0.63
SWD3P38123 PHO4YFR034C 939 nt11.04□□□□□ -0.64
SWD3P38123 YBL100CYBL100C 315 nt10.94□□□□□ -0.66
SWD3P38123 BDH2YAL061W 1254 nt10.92□□□□□ -0.66
SWD3P38123 MEP2YNL142W 1500 nt10.91□□□□□ -0.66
SWD3P38123 YPS1YLR120C 1710 nt10.91□□□□□ -0.66
SWD3P38123 SSA4YER103W 1929 nt10.91□□□□□ -0.66
SWD3P38123 WWM1YFL010C 636 nt10.86□□□□□ -0.67
SWD3P38123 SHU1YHL006C 453 nt10.84□□□□□ -0.67
SWD3P38123 FUN26YAL022C 1554 nt10.82□□□□□ -0.68
SWD3P38123 YDR095CYDR095C 411 nt10.8□□□□□ -0.68
SWD3P38123 YHR165W-AYHR165W-A 312 nt10.78□□□□□ -0.68
SWD3P38123 YAL037C-BYAL037C-B 975 nt10.75□□□□□ -0.69
SWD3P38123 LSM3YLR438C-A 270 nt10.75□□□□□ -0.69
SWD3P38123 TRM9YML014W 840 nt10.75□□□□□ -0.69
SWD3P38123 DCW1YKL046C 1350 nt10.74□□□□□ -0.69
SWD3P38123 YGR021WYGR021W 873 nt10.71□□□□□ -0.69
SWD3P38123 YFL021C-AYFL021C-A 855 nt10.68□□□□□ -0.7
SWD3P38123 HOM6YJR139C 1080 nt10.68□□□□□ -0.7
SWD3P38123 ALF1YNL148C 765 nt10.68□□□□□ -0.7
SWD3P38123 YKL097CYKL097C 411 nt10.66□□□□□ -0.7
SWD3P38123 CCT6YDR188W 1641 nt10.66□□□□□ -0.7
SWD3P38123 PTP1YDL230W 1008 nt10.61□□□□□ -0.71
SWD3P38123 RPP2AYOL039W 321 nt10.61□□□□□ -0.71
SWD3P38123 EMI2YDR516C 1503 nt10.59□□□□□ -0.71
SWD3P38123 MNP1YGL068W 585 nt10.58□□□□□ -0.72
SWD3P38123 SUF2tP(AGG)C 72 nt10.56□□□□□ -0.72
SWD3P38123 SUF10tP(AGG)N 72 nt10.56□□□□□ -0.72
SWD3P38123 SIS1YNL007C 1059 nt10.56□□□□□ -0.72
SWD3P38123 CAC2YML102W 1407 nt10.56□□□□□ -0.72
SWD3P38123 RKM5YLR137W 1104 nt10.52□□□□□ -0.73
SWD3P38123 YMR090WYMR090W 684 nt10.52□□□□□ -0.73
SWD3P38123 BDF1YLR399C 2061 nt10.52□□□□□ -0.73
SWD3P38123 YDL221WYDL221W 552 nt10.5□□□□□ -0.73
SWD3P38123 YBR220CYBR220C 1683 nt10.47□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms