Protein–RNA interactions for Protein: P25356

BPH1, Beige protein homolog 1, yeastyeast

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BPH1P25356 YML009W-BYML009W-B 477 nt17.41■□□□□ 0.38
BPH1P25356 NSR1YGR159C 1245 nt16.79■□□□□ 0.28
BPH1P25356 NOP1YDL014W 984 nt16.66■□□□□ 0.26
BPH1P25356 YKL036CYKL036C 393 nt15.94■□□□□ 0.14
BPH1P25356 SRX1YKL086W 384 nt15.07■□□□□ 0
BPH1P25356 Q0297Q0297 156 nt14.95□□□□□ -0.02
BPH1P25356 YJL027CYJL027C 417 nt14.92□□□□□ -0.02
BPH1P25356 SCS3YGL126W 1143 nt14.79□□□□□ -0.04
BPH1P25356 MDJ1YFL016C 1536 nt14.75□□□□□ -0.05
BPH1P25356 YCR051WYCR051W 669 nt14.08□□□□□ -0.16
BPH1P25356 YOL085CYOL085C 342 nt13.71□□□□□ -0.22
BPH1P25356 PKP1YIL042C 1185 nt13.61□□□□□ -0.23
BPH1P25356 TRN1tP(UGG)A 72 nt13.39□□□□□ -0.27
BPH1P25356 SUF9tP(UGG)F 72 nt13.39□□□□□ -0.27
BPH1P25356 SUF8tP(UGG)H 72 nt13.39□□□□□ -0.27
BPH1P25356 tP(UGG)LtP(UGG)L 72 nt13.39□□□□□ -0.27
BPH1P25356 SUF7tP(UGG)M 72 nt13.39□□□□□ -0.27
BPH1P25356 tP(UGG)N1tP(UGG)N1 72 nt13.39□□□□□ -0.27
BPH1P25356 tP(UGG)N2tP(UGG)N2 72 nt13.39□□□□□ -0.27
BPH1P25356 tP(UGG)O1tP(UGG)O1 72 nt13.39□□□□□ -0.27
BPH1P25356 SUF11tP(UGG)O2 72 nt13.39□□□□□ -0.27
BPH1P25356 SCJ1YMR214W 1134 nt13.32□□□□□ -0.28
BPH1P25356 DBP2YNL112W 1641 nt13.32□□□□□ -0.28
BPH1P25356 RPP1BYDL130W 321 nt13.25□□□□□ -0.29
BPH1P25356 ATS1YAL020C 1002 nt13.21□□□□□ -0.3
BPH1P25356 CCC1YLR220W 969 nt13.09□□□□□ -0.31
BPH1P25356 PET122YER153C 765 nt12.74□□□□□ -0.37
BPH1P25356 SCR1SCR1 522 nt12.72□□□□□ -0.37
BPH1P25356 tP(UGG)O3tP(UGG)O3 72 nt12.62□□□□□ -0.39
BPH1P25356 RRN5YLR141W 1092 nt12.56□□□□□ -0.4
BPH1P25356 RVS167YDR388W 1449 nt12.5□□□□□ -0.41
BPH1P25356 RSB1YOR049C 1065 nt12.37□□□□□ -0.43
BPH1P25356 YBR190WYBR190W 312 nt12.35□□□□□ -0.43
BPH1P25356 YER088W-BYER088W-B 147 nt12.28□□□□□ -0.44
BPH1P25356 RTC3YHR087W 336 nt12.21□□□□□ -0.45
BPH1P25356 PST2YDR032C 597 nt12.19□□□□□ -0.46
BPH1P25356 YDJ1YNL064C 1230 nt12.08□□□□□ -0.48
BPH1P25356 SHR5YOL110W 714 nt12.08□□□□□ -0.48
BPH1P25356 GAR1YHR089C 618 nt11.98□□□□□ -0.49
BPH1P25356 YKL097CYKL097C 411 nt11.91□□□□□ -0.5
BPH1P25356 DEP1YAL013W 1218 nt11.74□□□□□ -0.53
BPH1P25356 SHU1YHL006C 453 nt11.61□□□□□ -0.55
BPH1P25356 URN1YPR152C 1398 nt11.59□□□□□ -0.55
BPH1P25356 YOR139CYOR139C 393 nt11.55□□□□□ -0.56
BPH1P25356 YAL037C-BYAL037C-B 975 nt11.48□□□□□ -0.57
BPH1P25356 SSA1YAL005C 1929 nt11.37□□□□□ -0.59
BPH1P25356 YNL208WYNL208W 600 nt11.37□□□□□ -0.59
BPH1P25356 TIR1YER011W 765 nt11.35□□□□□ -0.59
BPH1P25356 OPI9YLR338W 858 nt11.34□□□□□ -0.59
BPH1P25356 SRB2YHR041C 633 nt11.3□□□□□ -0.6
BPH1P25356 ARE1YCR048W 1833 nt11.25□□□□□ -0.61
BPH1P25356 RPN10YHR200W 807 nt11.24□□□□□ -0.61
BPH1P25356 SAH1YER043C 1350 nt11.24□□□□□ -0.61
BPH1P25356 NPL3YDR432W 1245 nt11.2□□□□□ -0.62
BPH1P25356 WWM1YFL010C 636 nt11.16□□□□□ -0.62
BPH1P25356 PUT4YOR348C 1884 nt11.15□□□□□ -0.63
BPH1P25356 MNP1YGL068W 585 nt11.07□□□□□ -0.64
BPH1P25356 YJR018WYJR018W 363 nt11.07□□□□□ -0.64
BPH1P25356 HOM6YJR139C 1080 nt11.07□□□□□ -0.64
BPH1P25356 YJR120WYJR120W 351 nt11.06□□□□□ -0.64
BPH1P25356 SSA3YBL075C 1950 nt11.02□□□□□ -0.64
BPH1P25356 YGR021WYGR021W 873 nt11.01□□□□□ -0.65
BPH1P25356 PUN1YLR414C 792 nt11.01□□□□□ -0.65
BPH1P25356 YHR049C-AYHR049C-A 297 nt10.97□□□□□ -0.65
BPH1P25356 YOL037CYOL037C 354 nt10.95□□□□□ -0.66
BPH1P25356 YFL021C-AYFL021C-A 855 nt10.88□□□□□ -0.67
BPH1P25356 PTC2YER089C 1395 nt10.87□□□□□ -0.67
BPH1P25356 tM(CAU)CtM(CAU)C 72 nt10.85□□□□□ -0.67
BPH1P25356 IMT4tM(CAU)E 72 nt10.85□□□□□ -0.67
BPH1P25356 IMT3tM(CAU)J3 72 nt10.85□□□□□ -0.67
BPH1P25356 IMT1tM(CAU)O1 72 nt10.85□□□□□ -0.67
BPH1P25356 IMT2tM(CAU)P 72 nt10.85□□□□□ -0.67
BPH1P25356 RPP2BYDR382W 333 nt10.82□□□□□ -0.68
BPH1P25356 POA1YBR022W 534 nt10.81□□□□□ -0.68
BPH1P25356 BUD23YCR047C 828 nt10.73□□□□□ -0.69
BPH1P25356 BDH2YAL061W 1254 nt10.73□□□□□ -0.69
BPH1P25356 PUS2YGL063W 1113 nt10.72□□□□□ -0.69
BPH1P25356 RKM5YLR137W 1104 nt10.7□□□□□ -0.7
BPH1P25356 WHI5YOR083W 888 nt10.7□□□□□ -0.7
BPH1P25356 YPR011CYPR011C 981 nt10.68□□□□□ -0.7
BPH1P25356 YLR281CYLR281C 468 nt10.67□□□□□ -0.7
BPH1P25356 NAB2YGL122C 1578 nt10.63□□□□□ -0.71
BPH1P25356 TRM9YML014W 840 nt10.59□□□□□ -0.71
BPH1P25356 FIS1YIL065C 468 nt10.58□□□□□ -0.72
BPH1P25356 YLR236CYLR236C 324 nt10.56□□□□□ -0.72
BPH1P25356 LSM3YLR438C-A 270 nt10.56□□□□□ -0.72
BPH1P25356 BSC6YOL137W 1494 nt10.56□□□□□ -0.72
BPH1P25356 MOT3YMR070W 1473 nt10.51□□□□□ -0.73
BPH1P25356 FMP45YDL222C 930 nt10.5□□□□□ -0.73
BPH1P25356 YBL100CYBL100C 315 nt10.49□□□□□ -0.73
BPH1P25356 INM2YDR287W 879 nt10.48□□□□□ -0.73
BPH1P25356 DSK2YMR276W 1122 nt10.48□□□□□ -0.73
BPH1P25356 PHO4YFR034C 939 nt10.47□□□□□ -0.73
BPH1P25356 DAL1YIR027C 1383 nt10.44□□□□□ -0.74
BPH1P25356 FPR4YLR449W 1179 nt10.42□□□□□ -0.74
BPH1P25356 YLR154C-GYLR154C-G 150 nt10.41□□□□□ -0.74
BPH1P25356 IMP2'YIL154C 1041 nt10.41□□□□□ -0.74
BPH1P25356 SPT5YML010W 3192 nt10.34□□□□□ -0.75
BPH1P25356 CCT6YDR188W 1641 nt10.33□□□□□ -0.76
BPH1P25356 FUN26YAL022C 1554 nt10.29□□□□□ -0.76
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms