RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C SGS1P35187 1447 aa14.39□□□□□ -0.11
PUP3YER094C INO80P53115 1489 aa14.24□□□□□ -0.13
PUP3YER094C MON2P48563 1636 aaPredicted RBP14.22□□□□□ -0.13
PUP3YER094C TCB3Q03640 1545 aaKnown RBP14.16□□□□□ -0.14
PUP3YER094C TY1B-DR4Q07793 1604 aa14.03□□□□□ -0.16
PUP3YER094C SWR1Q05471 1514 aa13.83□□□□□ -0.2
PUP3YER094C HSL1P34244 1518 aa13.72□□□□□ -0.21
PUP3YER094C SPT6P23615 1451 aaKnown RBP13.68□□□□□ -0.22
PUP3YER094C SPA2P23201 1466 aaKnown RBP13.63□□□□□ -0.23
PUP3YER094C SSN2P38931 1420 aa13.63□□□□□ -0.23
PUP3YER094C DNA2P38859 1522 aa13.51□□□□□ -0.25
PUP3YER094C KOG1P38873 1557 aa13.47□□□□□ -0.25
PUP3YER094C HIR3P47171 1648 aa13.46□□□□□ -0.26
PUP3YER094C XRN1P22147 1528 aaKnown RBP13.31□□□□□ -0.28
PUP3YER094C DRS1P32892 752 aaKnown RBP13.19□□□□□ -0.3
PUP3YER094C REV3P14284 1504 aa13.13□□□□□ -0.31
PUP3YER094C THO2P53552 1597 aaKnown RBP13.11□□□□□ -0.31
PUP3YER094C BUD4P47136 1447 aa13.08□□□□□ -0.32
PUP3YER094C ECM5Q03214 1411 aa13.04□□□□□ -0.32
PUP3YER094C SIN3P22579 1536 aa13.02□□□□□ -0.33
PUP3YER094C SSK2P53599 1579 aa12.94□□□□□ -0.34
PUP3YER094C TAF2P23255 1407 aa12.94□□□□□ -0.34
PUP3YER094C ATG2P53855 1592 aa12.9□□□□□ -0.34
PUP3YER094C MDS3P53094 1487 aa12.9□□□□□ -0.34
PUP3YER094C ESP1Q03018 1630 aa12.84□□□□□ -0.35
PUP3YER094C PEP1P32319 1579 aa12.82□□□□□ -0.36
PUP3YER094C SKI3P17883 1432 aaKnown RBP12.79□□□□□ -0.36
PUP3YER094C MYO2P19524 1574 aaKnown RBP12.79□□□□□ -0.36
PUP3YER094C RSE1Q04693 1361 aaKnown RBP12.64□□□□□ -0.39
PUP3YER094C YPK9Q12697 1472 aa12.64□□□□□ -0.39
PUP3YER094C SCC2Q04002 1493 aa12.55□□□□□ -0.4
PUP3YER094C UFD4P33202 1483 aa12.5□□□□□ -0.41
PUP3YER094C BPT1P14772 1559 aa12.5□□□□□ -0.41
PUP3YER094C POL1P13382 1468 aa12.49□□□□□ -0.41
PUP3YER094C RPO31P04051 1460 aa12.46□□□□□ -0.41
PUP3YER094C RKR1Q04781 1562 aa12.43□□□□□ -0.42
PUP3YER094C STU1P38198 1513 aa12.42□□□□□ -0.42
PUP3YER094C TY2B-LR1P0C2J3 1770 aa12.39□□□□□ -0.43
PUP3YER094C TY2B-FP0CX63 1770 aa12.39□□□□□ -0.43
PUP3YER094C TY2B-GR2P0CX64 1770 aa12.39□□□□□ -0.43
PUP3YER094C TY2B-CP25384 1770 aa12.39□□□□□ -0.43
PUP3YER094C TY2B-DR2Q03494 1770 aa12.39□□□□□ -0.43
PUP3YER094C TY1B-DR1Q03855 1755 aa12.39□□□□□ -0.43
PUP3YER094C TY2B-DR3Q07791 1770 aaKnown RBP12.39□□□□□ -0.43
PUP3YER094C TY2B-OR1Q12113 1770 aa12.39□□□□□ -0.43
PUP3YER094C TY2B-DR1Q12472 1770 aa12.39□□□□□ -0.43
PUP3YER094C TY2B-OR2Q12501 1770 aa12.39□□□□□ -0.43
PUP3YER094C YCF1P39109 1515 aaKnown RBP12.38□□□□□ -0.43
PUP3YER094C TOP2P06786 1428 aaKnown RBP12.36□□□□□ -0.43
PUP3YER094C MTC1P47018 478 aaKnown RBP12.34□□□□□ -0.43
PUP3YER094C YOR1P53049 1477 aa12.34□□□□□ -0.43
PUP3YER094C TY1B-DR3Q99231 1755 aa12.29□□□□□ -0.44
PUP3YER094C TY2B-BQ12491 1770 aa12.27□□□□□ -0.45
PUP3YER094C SMC4Q12267 1418 aa12.27□□□□□ -0.45
PUP3YER094C YTA7P40340 1379 aa12.24□□□□□ -0.45
PUP3YER094C TY1B-BRQ12193 1756 aa12.23□□□□□ -0.45
PUP3YER094C TY1B-GR3Q12316 1755 aa12.23□□□□□ -0.45
PUP3YER094C TY1B-ORQ92393 1755 aa12.23□□□□□ -0.45
PUP3YER094C CDC25P04821 1589 aa12.23□□□□□ -0.45
PUP3YER094C RQC2Q12532 1038 aaKnown RBP12.22□□□□□ -0.45
PUP3YER094C TY1B-HO13535 1793 aa12.2□□□□□ -0.46
PUP3YER094C TY1B-DR5P0C2I2 1755 aa12.2□□□□□ -0.46
PUP3YER094C TY1B-DR6P0C2I3 1755 aa12.2□□□□□ -0.46
PUP3YER094C TY1B-LR2P0C2I5 1755 aa12.2□□□□□ -0.46
PUP3YER094C TY1B-LR3P0C2I6 1755 aaKnown RBP12.2□□□□□ -0.46
PUP3YER094C TY1B-PR1P0C2I9 1755 aaKnown RBP12.2□□□□□ -0.46
PUP3YER094C TY1B-PR2P0C2J0 1756 aa12.2□□□□□ -0.46
PUP3YER094C TY1B-PR3P0C2J1 1755 aaKnown RBP12.2□□□□□ -0.46
PUP3YER094C TY1B-JR1P47098 1755 aa12.2□□□□□ -0.46
PUP3YER094C TY1B-ML2Q03434 1755 aaKnown RBP12.2□□□□□ -0.46
PUP3YER094C TY1B-ER1Q03612 1755 aa12.2□□□□□ -0.46
PUP3YER094C TY1B-ML1Q04711 1755 aaKnown RBP12.2□□□□□ -0.46
PUP3YER094C TY1B-GR2Q12269 1755 aa12.2□□□□□ -0.46
PUP3YER094C TY1B-OLQ12273 1755 aa12.2□□□□□ -0.46
PUP3YER094C TY1B-PLQ12414 1755 aaKnown RBP12.2□□□□□ -0.46
PUP3YER094C CHD1P32657 1468 aa12.2□□□□□ -0.46
PUP3YER094C MYO4P32492 1471 aa12.19□□□□□ -0.46
PUP3YER094C ESC1Q03661 1658 aaKnown RBP12.16□□□□□ -0.46
PUP3YER094C MMS22Q06164 1454 aa12.14□□□□□ -0.47
PUP3YER094C PAN1P32521 1480 aa12.13□□□□□ -0.47
PUP3YER094C SPP41P38904 1435 aa12.11□□□□□ -0.47
PUP3YER094C VTH1P40438 1549 aa12.03□□□□□ -0.48
PUP3YER094C VTH2P40890 1549 aa12.03□□□□□ -0.48
PUP3YER094C DNF1P32660 1571 aa12.03□□□□□ -0.48
PUP3YER094C RPA190P10964 1664 aaKnown RBP12.02□□□□□ -0.49
PUP3YER094C SAS10Q12136 610 aaPredicted RBP12.01□□□□□ -0.49
PUP3YER094C TSC11P40061 1430 aa12.01□□□□□ -0.49
PUP3YER094C TRM732Q03496 1420 aa12□□□□□ -0.49
PUP3YER094C SNQ2P32568 1501 aaKnown RBP11.99□□□□□ -0.49
PUP3YER094C TY1B-JR2P47100 1755 aaKnown RBP11.99□□□□□ -0.49
PUP3YER094C TY1B-ER2Q03619 1755 aa11.99□□□□□ -0.49
PUP3YER094C TY1B-MR1Q04214 1755 aa11.99□□□□□ -0.49
PUP3YER094C TY1B-MR2Q04670 1755 aaKnown RBP11.99□□□□□ -0.49
PUP3YER094C TY1B-LR1Q12088 1755 aaKnown RBP11.99□□□□□ -0.49
PUP3YER094C TY1B-NL1Q12112 1755 aa11.99□□□□□ -0.49
PUP3YER094C TY1B-GR1Q12141 1755 aa11.99□□□□□ -0.49
PUP3YER094C TY1B-BLQ12490 1755 aa11.99□□□□□ -0.49
PUP3YER094C MLP2P40457 1679 aa11.98□□□□□ -0.49
PUP3YER094C NTE1Q04958 1679 aa11.96□□□□□ -0.5
PUP3YER094C STH1P32597 1359 aa11.93□□□□□ -0.5
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms