Protein–RNA interactions for Protein: P20486

CKS1, Cyclin-dependent kinases regulatory subunit, yeastyeast

Known RBP Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CKS1P20486 NSR1YGR159C 1245 nt17.05■□□□□ 0.32
CKS1P20486 YML009W-BYML009W-B 477 nt16.63■□□□□ 0.25
CKS1P20486 MDJ1YFL016C 1536 nt15.84■□□□□ 0.13
CKS1P20486 NOP1YDL014W 984 nt15.83■□□□□ 0.12
CKS1P20486 YJL027CYJL027C 417 nt14.49□□□□□ -0.09
CKS1P20486 YKL036CYKL036C 393 nt14.01□□□□□ -0.17
CKS1P20486 SRX1YKL086W 384 nt13.85□□□□□ -0.19
CKS1P20486 DBP2YNL112W 1641 nt13.75□□□□□ -0.21
CKS1P20486 SSA3YBL075C 1950 nt13.74□□□□□ -0.21
CKS1P20486 Q0297Q0297 156 nt13.66□□□□□ -0.22
CKS1P20486 YBR190WYBR190W 312 nt13.62□□□□□ -0.23
CKS1P20486 RTC3YHR087W 336 nt13.3□□□□□ -0.28
CKS1P20486 YCR051WYCR051W 669 nt13.11□□□□□ -0.31
CKS1P20486 TRN1tP(UGG)A 72 nt12.94□□□□□ -0.34
CKS1P20486 SUF9tP(UGG)F 72 nt12.94□□□□□ -0.34
CKS1P20486 SUF8tP(UGG)H 72 nt12.94□□□□□ -0.34
CKS1P20486 tP(UGG)LtP(UGG)L 72 nt12.94□□□□□ -0.34
CKS1P20486 SUF7tP(UGG)M 72 nt12.94□□□□□ -0.34
CKS1P20486 tP(UGG)N1tP(UGG)N1 72 nt12.94□□□□□ -0.34
CKS1P20486 tP(UGG)N2tP(UGG)N2 72 nt12.94□□□□□ -0.34
CKS1P20486 tP(UGG)O1tP(UGG)O1 72 nt12.94□□□□□ -0.34
CKS1P20486 SUF11tP(UGG)O2 72 nt12.94□□□□□ -0.34
CKS1P20486 PUT4YOR348C 1884 nt12.93□□□□□ -0.34
CKS1P20486 CCC1YLR220W 969 nt12.83□□□□□ -0.36
CKS1P20486 RVS167YDR388W 1449 nt12.7□□□□□ -0.38
CKS1P20486 SCJ1YMR214W 1134 nt12.59□□□□□ -0.39
CKS1P20486 ARE1YCR048W 1833 nt12.5□□□□□ -0.41
CKS1P20486 POA1YBR022W 534 nt12.47□□□□□ -0.41
CKS1P20486 SCS3YGL126W 1143 nt12.45□□□□□ -0.42
CKS1P20486 YHR049C-AYHR049C-A 297 nt12.33□□□□□ -0.44
CKS1P20486 BSC6YOL137W 1494 nt12.33□□□□□ -0.44
CKS1P20486 SPT5YML010W 3192 nt12.3□□□□□ -0.44
CKS1P20486 SAH1YER043C 1350 nt12.3□□□□□ -0.44
CKS1P20486 RPP1BYDL130W 321 nt12.26□□□□□ -0.45
CKS1P20486 URN1YPR152C 1398 nt12.22□□□□□ -0.45
CKS1P20486 YOL085CYOL085C 342 nt12.18□□□□□ -0.46
CKS1P20486 SSA4YER103W 1929 nt12.16□□□□□ -0.46
CKS1P20486 OPI9YLR338W 858 nt12.15□□□□□ -0.46
CKS1P20486 PKP1YIL042C 1185 nt12.12□□□□□ -0.47
CKS1P20486 SHR5YOL110W 714 nt12.12□□□□□ -0.47
CKS1P20486 DEP1YAL013W 1218 nt12.06□□□□□ -0.48
CKS1P20486 tP(UGG)O3tP(UGG)O3 72 nt12.02□□□□□ -0.49
CKS1P20486 BUD23YCR047C 828 nt11.99□□□□□ -0.49
CKS1P20486 PET122YER153C 765 nt11.84□□□□□ -0.51
CKS1P20486 RPN10YHR200W 807 nt11.82□□□□□ -0.52
CKS1P20486 PTC2YER089C 1395 nt11.79□□□□□ -0.52
CKS1P20486 BDF1YLR399C 2061 nt11.78□□□□□ -0.52
CKS1P20486 PUN1YLR414C 792 nt11.77□□□□□ -0.53
CKS1P20486 YNL208WYNL208W 600 nt11.73□□□□□ -0.53
CKS1P20486 NAB2YGL122C 1578 nt11.71□□□□□ -0.54
CKS1P20486 MEP2YNL142W 1500 nt11.63□□□□□ -0.55
CKS1P20486 YDJ1YNL064C 1230 nt11.6□□□□□ -0.55
CKS1P20486 TAT1YBR069C 1860 nt11.59□□□□□ -0.55
CKS1P20486 YJR018WYJR018W 363 nt11.59□□□□□ -0.55
CKS1P20486 FIS1YIL065C 468 nt11.52□□□□□ -0.57
CKS1P20486 GAR1YHR089C 618 nt11.49□□□□□ -0.57
CKS1P20486 DCW1YKL046C 1350 nt11.47□□□□□ -0.57
CKS1P20486 SCR1SCR1 522 nt11.46□□□□□ -0.57
CKS1P20486 DAL1YIR027C 1383 nt11.42□□□□□ -0.58
CKS1P20486 RRN5YLR141W 1092 nt11.41□□□□□ -0.58
CKS1P20486 FPR4YLR449W 1179 nt11.41□□□□□ -0.58
CKS1P20486 PAC11YDR488C 1602 nt11.36□□□□□ -0.59
CKS1P20486 YPS1YLR120C 1710 nt11.36□□□□□ -0.59
CKS1P20486 PHO4YFR034C 939 nt11.34□□□□□ -0.59
CKS1P20486 YJR120WYJR120W 351 nt11.33□□□□□ -0.6
CKS1P20486 YBR220CYBR220C 1683 nt11.3□□□□□ -0.6
CKS1P20486 EMI2YDR516C 1503 nt11.26□□□□□ -0.61
CKS1P20486 YHR165W-AYHR165W-A 312 nt11.26□□□□□ -0.61
CKS1P20486 INM2YDR287W 879 nt11.23□□□□□ -0.61
CKS1P20486 YER088W-BYER088W-B 147 nt11.18□□□□□ -0.62
CKS1P20486 YMR090WYMR090W 684 nt11.17□□□□□ -0.62
CKS1P20486 SSA1YAL005C 1929 nt11.17□□□□□ -0.62
CKS1P20486 YDR095CYDR095C 411 nt11.16□□□□□ -0.62
CKS1P20486 RPP2BYDR382W 333 nt11.15□□□□□ -0.62
CKS1P20486 TIR1YER011W 765 nt11.13□□□□□ -0.63
CKS1P20486 SDH1YKL148C 1923 nt11.12□□□□□ -0.63
CKS1P20486 YDL221WYDL221W 552 nt11.12□□□□□ -0.63
CKS1P20486 CAC2YML102W 1407 nt11.07□□□□□ -0.64
CKS1P20486 YBL100CYBL100C 315 nt11.06□□□□□ -0.64
CKS1P20486 PCH2YBR186W 1695 nt11.02□□□□□ -0.64
CKS1P20486 PTP1YDL230W 1008 nt11.02□□□□□ -0.65
CKS1P20486 NVJ2YPR091C 2313 nt11.01□□□□□ -0.65
CKS1P20486 GUT2YIL155C 1950 nt11□□□□□ -0.65
CKS1P20486 RSB1YOR049C 1065 nt10.97□□□□□ -0.65
CKS1P20486 RPP2AYOL039W 321 nt10.95□□□□□ -0.66
CKS1P20486 SCC4YER147C 1875 nt10.95□□□□□ -0.66
CKS1P20486 ATS1YAL020C 1002 nt10.93□□□□□ -0.66
CKS1P20486 SEC11YIR022W 504 nt10.92□□□□□ -0.66
CKS1P20486 FUN26YAL022C 1554 nt10.91□□□□□ -0.66
CKS1P20486 SRB2YHR041C 633 nt10.91□□□□□ -0.66
CKS1P20486 IRC15YPL017C 1500 nt10.89□□□□□ -0.67
CKS1P20486 ALF1YNL148C 765 nt10.86□□□□□ -0.67
CKS1P20486 PIB2YGL023C 1908 nt10.85□□□□□ -0.67
CKS1P20486 GIS3YLR094C 1509 nt10.84□□□□□ -0.67
CKS1P20486 BDH2YAL061W 1254 nt10.84□□□□□ -0.67
CKS1P20486 YSC84YHR016C 1407 nt10.8□□□□□ -0.68
CKS1P20486 TRM9YML014W 840 nt10.74□□□□□ -0.69
CKS1P20486 SIS1YNL007C 1059 nt10.73□□□□□ -0.69
CKS1P20486 YHL050CYHL050C 2094 nt10.73□□□□□ -0.69
CKS1P20486 RTF1YGL244W 1677 nt10.69□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms