Protein–RNA interactions for Protein: P33419

SPC29, Spindle pole component 29, yeastyeast

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC29P33419 YML009W-BYML009W-B 477 nt17.44■□□□□ 0.38
SPC29P33419 NSR1YGR159C 1245 nt17.26■□□□□ 0.35
SPC29P33419 NOP1YDL014W 984 nt17.09■□□□□ 0.33
SPC29P33419 YKL036CYKL036C 393 nt15.92■□□□□ 0.14
SPC29P33419 MDJ1YFL016C 1536 nt15.07■□□□□ 0
SPC29P33419 Q0297Q0297 156 nt15.04■□□□□ -0
SPC29P33419 SRX1YKL086W 384 nt14.94□□□□□ -0.02
SPC29P33419 YJL027CYJL027C 417 nt14.86□□□□□ -0.03
SPC29P33419 SCS3YGL126W 1143 nt14.56□□□□□ -0.08
SPC29P33419 YCR051WYCR051W 669 nt14.1□□□□□ -0.15
SPC29P33419 YOL085CYOL085C 342 nt13.76□□□□□ -0.21
SPC29P33419 Q0182Q0182 405 nt13.7□□□□□ -0.22
SPC29P33419 RPP1BYDL130W 321 nt13.47□□□□□ -0.25
SPC29P33419 PKP1YIL042C 1185 nt13.45□□□□□ -0.26
SPC29P33419 DBP2YNL112W 1641 nt13.45□□□□□ -0.26
SPC29P33419 TRN1tP(UGG)A 72 nt13.42□□□□□ -0.26
SPC29P33419 SUF9tP(UGG)F 72 nt13.42□□□□□ -0.26
SPC29P33419 SUF8tP(UGG)H 72 nt13.42□□□□□ -0.26
SPC29P33419 tP(UGG)LtP(UGG)L 72 nt13.42□□□□□ -0.26
SPC29P33419 SUF7tP(UGG)M 72 nt13.42□□□□□ -0.26
SPC29P33419 tP(UGG)N1tP(UGG)N1 72 nt13.42□□□□□ -0.26
SPC29P33419 tP(UGG)N2tP(UGG)N2 72 nt13.42□□□□□ -0.26
SPC29P33419 tP(UGG)O1tP(UGG)O1 72 nt13.42□□□□□ -0.26
SPC29P33419 SUF11tP(UGG)O2 72 nt13.42□□□□□ -0.26
SPC29P33419 MOT3YMR070W 1473 nt13.31□□□□□ -0.28
SPC29P33419 SCJ1YMR214W 1134 nt13.22□□□□□ -0.29
SPC29P33419 CCC1YLR220W 969 nt13.15□□□□□ -0.3
SPC29P33419 ATS1YAL020C 1002 nt13.06□□□□□ -0.32
SPC29P33419 YBR190WYBR190W 312 nt12.88□□□□□ -0.35
SPC29P33419 PET122YER153C 765 nt12.81□□□□□ -0.36
SPC29P33419 SCR1SCR1 522 nt12.76□□□□□ -0.37
SPC29P33419 RVS167YDR388W 1449 nt12.71□□□□□ -0.37
SPC29P33419 tP(UGG)O3tP(UGG)O3 72 nt12.71□□□□□ -0.37
SPC29P33419 RTC3YHR087W 336 nt12.51□□□□□ -0.41
SPC29P33419 RRN5YLR141W 1092 nt12.44□□□□□ -0.42
SPC29P33419 YDJ1YNL064C 1230 nt12.35□□□□□ -0.43
SPC29P33419 SHR5YOL110W 714 nt12.32□□□□□ -0.44
SPC29P33419 RSB1YOR049C 1065 nt12.23□□□□□ -0.45
SPC29P33419 YER088W-BYER088W-B 147 nt12.21□□□□□ -0.45
SPC29P33419 PST2YDR032C 597 nt12.08□□□□□ -0.48
SPC29P33419 GAR1YHR089C 618 nt11.94□□□□□ -0.5
SPC29P33419 SSA3YBL075C 1950 nt11.87□□□□□ -0.51
SPC29P33419 URN1YPR152C 1398 nt11.81□□□□□ -0.52
SPC29P33419 DEP1YAL013W 1218 nt11.78□□□□□ -0.52
SPC29P33419 RPN10YHR200W 807 nt11.75□□□□□ -0.53
SPC29P33419 YNL208WYNL208W 600 nt11.74□□□□□ -0.53
SPC29P33419 YKL097CYKL097C 411 nt11.7□□□□□ -0.54
SPC29P33419 OPI9YLR338W 858 nt11.65□□□□□ -0.54
SPC29P33419 SSA1YAL005C 1929 nt11.62□□□□□ -0.55
SPC29P33419 TIR1YER011W 765 nt11.58□□□□□ -0.56
SPC29P33419 PUT4YOR348C 1884 nt11.54□□□□□ -0.56
SPC29P33419 SHU1YHL006C 453 nt11.52□□□□□ -0.57
SPC29P33419 SAH1YER043C 1350 nt11.47□□□□□ -0.57
SPC29P33419 ARE1YCR048W 1833 nt11.38□□□□□ -0.59
SPC29P33419 PUN1YLR414C 792 nt11.34□□□□□ -0.59
SPC29P33419 YJR018WYJR018W 363 nt11.3□□□□□ -0.6
SPC29P33419 YHR049C-AYHR049C-A 297 nt11.22□□□□□ -0.61
SPC29P33419 YAL037C-BYAL037C-B 975 nt11.2□□□□□ -0.62
SPC29P33419 SRB2YHR041C 633 nt11.19□□□□□ -0.62
SPC29P33419 YJR120WYJR120W 351 nt11.18□□□□□ -0.62
SPC29P33419 YOR139CYOR139C 393 nt11.17□□□□□ -0.62
SPC29P33419 YGR021WYGR021W 873 nt11.15□□□□□ -0.62
SPC29P33419 RPP2BYDR382W 333 nt11.14□□□□□ -0.63
SPC29P33419 POA1YBR022W 534 nt11.13□□□□□ -0.63
SPC29P33419 PTC2YER089C 1395 nt11.09□□□□□ -0.63
SPC29P33419 HOM6YJR139C 1080 nt11.09□□□□□ -0.63
SPC29P33419 WWM1YFL010C 636 nt11.06□□□□□ -0.64
SPC29P33419 NPL3YDR432W 1245 nt11.05□□□□□ -0.64
SPC29P33419 MNP1YGL068W 585 nt11□□□□□ -0.65
SPC29P33419 YOL037CYOL037C 354 nt11□□□□□ -0.65
SPC29P33419 YFL021C-AYFL021C-A 855 nt10.97□□□□□ -0.65
SPC29P33419 NAB2YGL122C 1578 nt10.97□□□□□ -0.65
SPC29P33419 BDH2YAL061W 1254 nt10.96□□□□□ -0.65
SPC29P33419 BUD23YCR047C 828 nt10.92□□□□□ -0.66
SPC29P33419 RKM5YLR137W 1104 nt10.92□□□□□ -0.66
SPC29P33419 INM2YDR287W 879 nt10.9□□□□□ -0.66
SPC29P33419 BSC6YOL137W 1494 nt10.89□□□□□ -0.67
SPC29P33419 LSM3YLR438C-A 270 nt10.87□□□□□ -0.67
SPC29P33419 DAL1YIR027C 1383 nt10.87□□□□□ -0.67
SPC29P33419 FIS1YIL065C 468 nt10.86□□□□□ -0.67
SPC29P33419 NME1NME1 340 nt10.85□□□□□ -0.67
SPC29P33419 YBL100CYBL100C 315 nt10.81□□□□□ -0.68
SPC29P33419 FPS1YLL043W 2010 nt10.8□□□□□ -0.68
SPC29P33419 PHO4YFR034C 939 nt10.75□□□□□ -0.69
SPC29P33419 tM(CAU)CtM(CAU)C 72 nt10.73□□□□□ -0.69
SPC29P33419 IMT4tM(CAU)E 72 nt10.73□□□□□ -0.69
SPC29P33419 IMT3tM(CAU)J3 72 nt10.73□□□□□ -0.69
SPC29P33419 IMT1tM(CAU)O1 72 nt10.73□□□□□ -0.69
SPC29P33419 IMT2tM(CAU)P 72 nt10.73□□□□□ -0.69
SPC29P33419 FPR4YLR449W 1179 nt10.73□□□□□ -0.69
SPC29P33419 TRM9YML014W 840 nt10.68□□□□□ -0.7
SPC29P33419 FUN26YAL022C 1554 nt10.68□□□□□ -0.7
SPC29P33419 YLR281CYLR281C 468 nt10.66□□□□□ -0.7
SPC29P33419 CCT6YDR188W 1641 nt10.62□□□□□ -0.71
SPC29P33419 PUS2YGL063W 1113 nt10.57□□□□□ -0.72
SPC29P33419 WHI5YOR083W 888 nt10.57□□□□□ -0.72
SPC29P33419 SUF2tP(AGG)C 72 nt10.52□□□□□ -0.73
SPC29P33419 SUF10tP(AGG)N 72 nt10.52□□□□□ -0.73
SPC29P33419 SPT5YML010W 3192 nt10.52□□□□□ -0.73
SPC29P33419 YPS1YLR120C 1710 nt10.5□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms