Protein–RNA interactions for Protein: Q05776

UPS1, Protein UPS1, mitochondrial, yeastyeast

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPS1Q05776 NSR1YGR159C 1245 nt17.23■□□□□ 0.35
UPS1Q05776 YML009W-BYML009W-B 477 nt17.21■□□□□ 0.35
UPS1Q05776 NOP1YDL014W 984 nt16.72■□□□□ 0.27
UPS1Q05776 MDJ1YFL016C 1536 nt15.42■□□□□ 0.06
UPS1Q05776 YKL036CYKL036C 393 nt15.24■□□□□ 0.03
UPS1Q05776 SRX1YKL086W 384 nt14.55□□□□□ -0.08
UPS1Q05776 Q0297Q0297 156 nt14.52□□□□□ -0.09
UPS1Q05776 YJL027CYJL027C 417 nt14.28□□□□□ -0.12
UPS1Q05776 YCR051WYCR051W 669 nt13.81□□□□□ -0.2
UPS1Q05776 SCS3YGL126W 1143 nt13.75□□□□□ -0.21
UPS1Q05776 DBP2YNL112W 1641 nt13.52□□□□□ -0.25
UPS1Q05776 TRN1tP(UGG)A 72 nt13.24□□□□□ -0.29
UPS1Q05776 SUF9tP(UGG)F 72 nt13.24□□□□□ -0.29
UPS1Q05776 SUF8tP(UGG)H 72 nt13.24□□□□□ -0.29
UPS1Q05776 tP(UGG)LtP(UGG)L 72 nt13.24□□□□□ -0.29
UPS1Q05776 SUF7tP(UGG)M 72 nt13.24□□□□□ -0.29
UPS1Q05776 tP(UGG)N1tP(UGG)N1 72 nt13.24□□□□□ -0.29
UPS1Q05776 tP(UGG)N2tP(UGG)N2 72 nt13.24□□□□□ -0.29
UPS1Q05776 tP(UGG)O1tP(UGG)O1 72 nt13.24□□□□□ -0.29
UPS1Q05776 SUF11tP(UGG)O2 72 nt13.24□□□□□ -0.29
UPS1Q05776 YBR190WYBR190W 312 nt13.22□□□□□ -0.29
UPS1Q05776 YOL085CYOL085C 342 nt13.16□□□□□ -0.3
UPS1Q05776 CCC1YLR220W 969 nt13.11□□□□□ -0.31
UPS1Q05776 RPP1BYDL130W 321 nt13.04□□□□□ -0.32
UPS1Q05776 PKP1YIL042C 1185 nt12.97□□□□□ -0.33
UPS1Q05776 RTC3YHR087W 336 nt12.94□□□□□ -0.34
UPS1Q05776 RVS167YDR388W 1449 nt12.83□□□□□ -0.36
UPS1Q05776 SCJ1YMR214W 1134 nt12.61□□□□□ -0.39
UPS1Q05776 tP(UGG)O3tP(UGG)O3 72 nt12.47□□□□□ -0.41
UPS1Q05776 PET122YER153C 765 nt12.45□□□□□ -0.42
UPS1Q05776 SCR1SCR1 522 nt12.36□□□□□ -0.43
UPS1Q05776 SHR5YOL110W 714 nt12.29□□□□□ -0.44
UPS1Q05776 ATS1YAL020C 1002 nt12.25□□□□□ -0.45
UPS1Q05776 YDJ1YNL064C 1230 nt12.09□□□□□ -0.47
UPS1Q05776 RRN5YLR141W 1092 nt12.08□□□□□ -0.48
UPS1Q05776 PUT4YOR348C 1884 nt12.06□□□□□ -0.48
UPS1Q05776 URN1YPR152C 1398 nt12.03□□□□□ -0.48
UPS1Q05776 DEP1YAL013W 1218 nt11.95□□□□□ -0.5
UPS1Q05776 RPN10YHR200W 807 nt11.91□□□□□ -0.5
UPS1Q05776 OPI9YLR338W 858 nt11.89□□□□□ -0.51
UPS1Q05776 YER088W-BYER088W-B 147 nt11.83□□□□□ -0.52
UPS1Q05776 GAR1YHR089C 618 nt11.83□□□□□ -0.52
UPS1Q05776 SAH1YER043C 1350 nt11.82□□□□□ -0.52
UPS1Q05776 RSB1YOR049C 1065 nt11.82□□□□□ -0.52
UPS1Q05776 YNL208WYNL208W 600 nt11.8□□□□□ -0.52
UPS1Q05776 ARE1YCR048W 1833 nt11.79□□□□□ -0.52
UPS1Q05776 YHR049C-AYHR049C-A 297 nt11.69□□□□□ -0.54
UPS1Q05776 POA1YBR022W 534 nt11.69□□□□□ -0.54
UPS1Q05776 PUN1YLR414C 792 nt11.59□□□□□ -0.55
UPS1Q05776 SSA3YBL075C 1950 nt11.57□□□□□ -0.56
UPS1Q05776 YJR018WYJR018W 363 nt11.48□□□□□ -0.57
UPS1Q05776 BSC6YOL137W 1494 nt11.47□□□□□ -0.57
UPS1Q05776 TIR1YER011W 765 nt11.45□□□□□ -0.58
UPS1Q05776 BUD23YCR047C 828 nt11.43□□□□□ -0.58
UPS1Q05776 PTC2YER089C 1395 nt11.41□□□□□ -0.58
UPS1Q05776 PST2YDR032C 597 nt11.35□□□□□ -0.59
UPS1Q05776 NAB2YGL122C 1578 nt11.32□□□□□ -0.6
UPS1Q05776 SSA1YAL005C 1929 nt11.29□□□□□ -0.6
UPS1Q05776 RPP2BYDR382W 333 nt11.26□□□□□ -0.61
UPS1Q05776 YJR120WYJR120W 351 nt11.18□□□□□ -0.62
UPS1Q05776 DAL1YIR027C 1383 nt11.14□□□□□ -0.63
UPS1Q05776 FPR4YLR449W 1179 nt11.12□□□□□ -0.63
UPS1Q05776 INM2YDR287W 879 nt11.11□□□□□ -0.63
UPS1Q05776 FIS1YIL065C 468 nt11.1□□□□□ -0.63
UPS1Q05776 PHO4YFR034C 939 nt11.02□□□□□ -0.65
UPS1Q05776 SRB2YHR041C 633 nt11□□□□□ -0.65
UPS1Q05776 BDH2YAL061W 1254 nt10.96□□□□□ -0.65
UPS1Q05776 YBL100CYBL100C 315 nt10.96□□□□□ -0.65
UPS1Q05776 SPT5YML010W 3192 nt10.93□□□□□ -0.66
UPS1Q05776 SHU1YHL006C 453 nt10.92□□□□□ -0.66
UPS1Q05776 WWM1YFL010C 636 nt10.88□□□□□ -0.67
UPS1Q05776 YKL097CYKL097C 411 nt10.88□□□□□ -0.67
UPS1Q05776 YGR021WYGR021W 873 nt10.85□□□□□ -0.67
UPS1Q05776 YPS1YLR120C 1710 nt10.84□□□□□ -0.67
UPS1Q05776 FUN26YAL022C 1554 nt10.82□□□□□ -0.68
UPS1Q05776 LSM3YLR438C-A 270 nt10.8□□□□□ -0.68
UPS1Q05776 TRM9YML014W 840 nt10.8□□□□□ -0.68
UPS1Q05776 YAL037C-BYAL037C-B 975 nt10.79□□□□□ -0.68
UPS1Q05776 MEP2YNL142W 1500 nt10.79□□□□□ -0.68
UPS1Q05776 YFL021C-AYFL021C-A 855 nt10.77□□□□□ -0.69
UPS1Q05776 YHR165W-AYHR165W-A 312 nt10.77□□□□□ -0.69
UPS1Q05776 YDR095CYDR095C 411 nt10.76□□□□□ -0.69
UPS1Q05776 ALF1YNL148C 765 nt10.75□□□□□ -0.69
UPS1Q05776 HOM6YJR139C 1080 nt10.73□□□□□ -0.69
UPS1Q05776 CCT6YDR188W 1641 nt10.67□□□□□ -0.7
UPS1Q05776 SSA4YER103W 1929 nt10.67□□□□□ -0.7
UPS1Q05776 MNP1YGL068W 585 nt10.65□□□□□ -0.7
UPS1Q05776 SUF2tP(AGG)C 72 nt10.65□□□□□ -0.7
UPS1Q05776 SUF10tP(AGG)N 72 nt10.65□□□□□ -0.7
UPS1Q05776 RKM5YLR137W 1104 nt10.59□□□□□ -0.71
UPS1Q05776 DCW1YKL046C 1350 nt10.57□□□□□ -0.72
UPS1Q05776 RPP2AYOL039W 321 nt10.57□□□□□ -0.72
UPS1Q05776 YMR090WYMR090W 684 nt10.51□□□□□ -0.73
UPS1Q05776 SIS1YNL007C 1059 nt10.51□□□□□ -0.73
UPS1Q05776 YOL037CYOL037C 354 nt10.49□□□□□ -0.73
UPS1Q05776 EMI2YDR516C 1503 nt10.48□□□□□ -0.73
UPS1Q05776 PTP1YDL230W 1008 nt10.47□□□□□ -0.73
UPS1Q05776 NPL3YDR432W 1245 nt10.44□□□□□ -0.74
UPS1Q05776 CAC2YML102W 1407 nt10.41□□□□□ -0.74
UPS1Q05776 YDL221WYDL221W 552 nt10.4□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms