Protein–RNA interactions for Protein: P53956

YNL046W, Uncharacterized endoplasmic reticulum membrane protein YNL046W, yeastyeast

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL046WP53956 YML009W-BYML009W-B 477 nt17.38■□□□□ 0.37
YNL046WP53956 NSR1YGR159C 1245 nt17.18■□□□□ 0.34
YNL046WP53956 NOP1YDL014W 984 nt16.97■□□□□ 0.31
YNL046WP53956 YKL036CYKL036C 393 nt15.7■□□□□ 0.1
YNL046WP53956 MDJ1YFL016C 1536 nt15.13■□□□□ 0.01
YNL046WP53956 Q0297Q0297 156 nt14.81□□□□□ -0.04
YNL046WP53956 SRX1YKL086W 384 nt14.77□□□□□ -0.05
YNL046WP53956 YJL027CYJL027C 417 nt14.68□□□□□ -0.06
YNL046WP53956 SCS3YGL126W 1143 nt14.28□□□□□ -0.12
YNL046WP53956 YCR051WYCR051W 669 nt14.06□□□□□ -0.16
YNL046WP53956 YOL085CYOL085C 342 nt13.55□□□□□ -0.24
YNL046WP53956 DBP2YNL112W 1641 nt13.37□□□□□ -0.27
YNL046WP53956 PKP1YIL042C 1185 nt13.34□□□□□ -0.27
YNL046WP53956 RPP1BYDL130W 321 nt13.31□□□□□ -0.28
YNL046WP53956 TRN1tP(UGG)A 72 nt13.28□□□□□ -0.28
YNL046WP53956 SUF9tP(UGG)F 72 nt13.28□□□□□ -0.28
YNL046WP53956 SUF8tP(UGG)H 72 nt13.28□□□□□ -0.28
YNL046WP53956 tP(UGG)LtP(UGG)L 72 nt13.28□□□□□ -0.28
YNL046WP53956 SUF7tP(UGG)M 72 nt13.28□□□□□ -0.28
YNL046WP53956 tP(UGG)N1tP(UGG)N1 72 nt13.28□□□□□ -0.28
YNL046WP53956 tP(UGG)N2tP(UGG)N2 72 nt13.28□□□□□ -0.28
YNL046WP53956 tP(UGG)O1tP(UGG)O1 72 nt13.28□□□□□ -0.28
YNL046WP53956 SUF11tP(UGG)O2 72 nt13.28□□□□□ -0.28
YNL046WP53956 CCC1YLR220W 969 nt13.19□□□□□ -0.3
YNL046WP53956 YBR190WYBR190W 312 nt12.92□□□□□ -0.34
YNL046WP53956 ATS1YAL020C 1002 nt12.8□□□□□ -0.36
YNL046WP53956 SCJ1YMR214W 1134 nt12.79□□□□□ -0.36
YNL046WP53956 RVS167YDR388W 1449 nt12.75□□□□□ -0.37
YNL046WP53956 PET122YER153C 765 nt12.68□□□□□ -0.38
YNL046WP53956 RTC3YHR087W 336 nt12.68□□□□□ -0.38
YNL046WP53956 SCR1SCR1 522 nt12.66□□□□□ -0.38
YNL046WP53956 tP(UGG)O3tP(UGG)O3 72 nt12.61□□□□□ -0.39
YNL046WP53956 RRN5YLR141W 1092 nt12.32□□□□□ -0.44
YNL046WP53956 SHR5YOL110W 714 nt12.27□□□□□ -0.45
YNL046WP53956 YDJ1YNL064C 1230 nt12.2□□□□□ -0.46
YNL046WP53956 RSB1YOR049C 1065 nt12.14□□□□□ -0.47
YNL046WP53956 YER088W-BYER088W-B 147 nt12.07□□□□□ -0.48
YNL046WP53956 GAR1YHR089C 618 nt11.92□□□□□ -0.5
YNL046WP53956 DEP1YAL013W 1218 nt11.88□□□□□ -0.51
YNL046WP53956 URN1YPR152C 1398 nt11.87□□□□□ -0.51
YNL046WP53956 PST2YDR032C 597 nt11.81□□□□□ -0.52
YNL046WP53956 RPN10YHR200W 807 nt11.79□□□□□ -0.52
YNL046WP53956 YNL208WYNL208W 600 nt11.73□□□□□ -0.53
YNL046WP53956 OPI9YLR338W 858 nt11.66□□□□□ -0.54
YNL046WP53956 PUT4YOR348C 1884 nt11.59□□□□□ -0.55
YNL046WP53956 SAH1YER043C 1350 nt11.54□□□□□ -0.56
YNL046WP53956 TIR1YER011W 765 nt11.52□□□□□ -0.57
YNL046WP53956 YKL097CYKL097C 411 nt11.46□□□□□ -0.57
YNL046WP53956 ARE1YCR048W 1833 nt11.41□□□□□ -0.58
YNL046WP53956 PUN1YLR414C 792 nt11.36□□□□□ -0.59
YNL046WP53956 YJR018WYJR018W 363 nt11.33□□□□□ -0.6
YNL046WP53956 YHR049C-AYHR049C-A 297 nt11.32□□□□□ -0.6
YNL046WP53956 SHU1YHL006C 453 nt11.31□□□□□ -0.6
YNL046WP53956 SSA1YAL005C 1929 nt11.31□□□□□ -0.6
YNL046WP53956 POA1YBR022W 534 nt11.28□□□□□ -0.6
YNL046WP53956 RPP2BYDR382W 333 nt11.2□□□□□ -0.62
YNL046WP53956 PTC2YER089C 1395 nt11.17□□□□□ -0.62
YNL046WP53956 YAL037C-BYAL037C-B 975 nt11.13□□□□□ -0.63
YNL046WP53956 BUD23YCR047C 828 nt11.1□□□□□ -0.63
YNL046WP53956 SRB2YHR041C 633 nt11.05□□□□□ -0.64
YNL046WP53956 YJR120WYJR120W 351 nt11.05□□□□□ -0.64
YNL046WP53956 NAB2YGL122C 1578 nt11.03□□□□□ -0.64
YNL046WP53956 YGR021WYGR021W 873 nt11.03□□□□□ -0.64
YNL046WP53956 BSC6YOL137W 1494 nt11□□□□□ -0.65
YNL046WP53956 WWM1YFL010C 636 nt11□□□□□ -0.65
YNL046WP53956 INM2YDR287W 879 nt10.93□□□□□ -0.66
YNL046WP53956 BDH2YAL061W 1254 nt10.93□□□□□ -0.66
YNL046WP53956 HOM6YJR139C 1080 nt10.92□□□□□ -0.66
YNL046WP53956 FPR4YLR449W 1179 nt10.92□□□□□ -0.66
YNL046WP53956 SSA3YBL075C 1950 nt10.91□□□□□ -0.66
YNL046WP53956 DAL1YIR027C 1383 nt10.9□□□□□ -0.66
YNL046WP53956 NPL3YDR432W 1245 nt10.9□□□□□ -0.66
YNL046WP53956 YOR139CYOR139C 393 nt10.9□□□□□ -0.66
YNL046WP53956 MNP1YGL068W 585 nt10.88□□□□□ -0.67
YNL046WP53956 YFL021C-AYFL021C-A 855 nt10.86□□□□□ -0.67
YNL046WP53956 YBL100CYBL100C 315 nt10.84□□□□□ -0.67
YNL046WP53956 FIS1YIL065C 468 nt10.83□□□□□ -0.68
YNL046WP53956 LSM3YLR438C-A 270 nt10.8□□□□□ -0.68
YNL046WP53956 YOL037CYOL037C 354 nt10.79□□□□□ -0.68
YNL046WP53956 PHO4YFR034C 939 nt10.78□□□□□ -0.68
YNL046WP53956 RKM5YLR137W 1104 nt10.78□□□□□ -0.68
YNL046WP53956 TRM9YML014W 840 nt10.73□□□□□ -0.69
YNL046WP53956 FUN26YAL022C 1554 nt10.69□□□□□ -0.7
YNL046WP53956 ALF1YNL148C 765 nt10.59□□□□□ -0.71
YNL046WP53956 CCT6YDR188W 1641 nt10.57□□□□□ -0.72
YNL046WP53956 SUF2tP(AGG)C 72 nt10.55□□□□□ -0.72
YNL046WP53956 SUF10tP(AGG)N 72 nt10.55□□□□□ -0.72
YNL046WP53956 YPS1YLR120C 1710 nt10.53□□□□□ -0.72
YNL046WP53956 tM(CAU)CtM(CAU)C 72 nt10.48□□□□□ -0.73
YNL046WP53956 IMT4tM(CAU)E 72 nt10.48□□□□□ -0.73
YNL046WP53956 IMT3tM(CAU)J3 72 nt10.48□□□□□ -0.73
YNL046WP53956 IMT1tM(CAU)O1 72 nt10.48□□□□□ -0.73
YNL046WP53956 IMT2tM(CAU)P 72 nt10.48□□□□□ -0.73
YNL046WP53956 YLR281CYLR281C 468 nt10.48□□□□□ -0.73
YNL046WP53956 YDR095CYDR095C 411 nt10.47□□□□□ -0.73
YNL046WP53956 YHR165W-AYHR165W-A 312 nt10.46□□□□□ -0.73
YNL046WP53956 PUS2YGL063W 1113 nt10.45□□□□□ -0.74
YNL046WP53956 WHI5YOR083W 888 nt10.45□□□□□ -0.74
YNL046WP53956 YLR154C-GYLR154C-G 150 nt10.39□□□□□ -0.75
YNL046WP53956 SIS1YNL007C 1059 nt10.34□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms