Protein–RNA interactions for Protein: P54999

SMX3, Small nuclear ribonucleoprotein F, yeastyeast

Predicted RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMX3P54999 NSR1YGR159C 1245 nt17.22■□□□□ 0.35
SMX3P54999 YML009W-BYML009W-B 477 nt16.98■□□□□ 0.31
SMX3P54999 NOP1YDL014W 984 nt16.32■□□□□ 0.2
SMX3P54999 MDJ1YFL016C 1536 nt15.75■□□□□ 0.11
SMX3P54999 YKL036CYKL036C 393 nt14.58□□□□□ -0.08
SMX3P54999 YJL027CYJL027C 417 nt14.54□□□□□ -0.08
SMX3P54999 SRX1YKL086W 384 nt14.2□□□□□ -0.14
SMX3P54999 Q0297Q0297 156 nt14.04□□□□□ -0.16
SMX3P54999 DBP2YNL112W 1641 nt13.66□□□□□ -0.22
SMX3P54999 YBR190WYBR190W 312 nt13.54□□□□□ -0.24
SMX3P54999 YCR051WYCR051W 669 nt13.52□□□□□ -0.25
SMX3P54999 RTC3YHR087W 336 nt13.32□□□□□ -0.28
SMX3P54999 TRN1tP(UGG)A 72 nt13.09□□□□□ -0.31
SMX3P54999 SUF9tP(UGG)F 72 nt13.09□□□□□ -0.31
SMX3P54999 SUF8tP(UGG)H 72 nt13.09□□□□□ -0.31
SMX3P54999 tP(UGG)LtP(UGG)L 72 nt13.09□□□□□ -0.31
SMX3P54999 SUF7tP(UGG)M 72 nt13.09□□□□□ -0.31
SMX3P54999 tP(UGG)N1tP(UGG)N1 72 nt13.09□□□□□ -0.31
SMX3P54999 tP(UGG)N2tP(UGG)N2 72 nt13.09□□□□□ -0.31
SMX3P54999 tP(UGG)O1tP(UGG)O1 72 nt13.09□□□□□ -0.31
SMX3P54999 SUF11tP(UGG)O2 72 nt13.09□□□□□ -0.31
SMX3P54999 CCC1YLR220W 969 nt13.07□□□□□ -0.32
SMX3P54999 SCS3YGL126W 1143 nt12.99□□□□□ -0.33
SMX3P54999 RVS167YDR388W 1449 nt12.88□□□□□ -0.35
SMX3P54999 SSA3YBL075C 1950 nt12.87□□□□□ -0.35
SMX3P54999 RPP1BYDL130W 321 nt12.63□□□□□ -0.39
SMX3P54999 YOL085CYOL085C 342 nt12.62□□□□□ -0.39
SMX3P54999 PUT4YOR348C 1884 nt12.6□□□□□ -0.39
SMX3P54999 SCJ1YMR214W 1134 nt12.6□□□□□ -0.39
SMX3P54999 PKP1YIL042C 1185 nt12.55□□□□□ -0.4
SMX3P54999 tP(UGG)O3tP(UGG)O3 72 nt12.26□□□□□ -0.45
SMX3P54999 SHR5YOL110W 714 nt12.26□□□□□ -0.45
SMX3P54999 ARE1YCR048W 1833 nt12.24□□□□□ -0.45
SMX3P54999 POA1YBR022W 534 nt12.24□□□□□ -0.45
SMX3P54999 URN1YPR152C 1398 nt12.23□□□□□ -0.45
SMX3P54999 SAH1YER043C 1350 nt12.18□□□□□ -0.46
SMX3P54999 YHR049C-AYHR049C-A 297 nt12.15□□□□□ -0.46
SMX3P54999 PET122YER153C 765 nt12.12□□□□□ -0.47
SMX3P54999 DEP1YAL013W 1218 nt12.12□□□□□ -0.47
SMX3P54999 OPI9YLR338W 858 nt12.11□□□□□ -0.47
SMX3P54999 BSC6YOL137W 1494 nt12.04□□□□□ -0.48
SMX3P54999 RPN10YHR200W 807 nt11.98□□□□□ -0.49
SMX3P54999 SCR1SCR1 522 nt11.94□□□□□ -0.5
SMX3P54999 BUD23YCR047C 828 nt11.9□□□□□ -0.5
SMX3P54999 YNL208WYNL208W 600 nt11.85□□□□□ -0.51
SMX3P54999 YDJ1YNL064C 1230 nt11.84□□□□□ -0.51
SMX3P54999 PUN1YLR414C 792 nt11.79□□□□□ -0.52
SMX3P54999 RRN5YLR141W 1092 nt11.74□□□□□ -0.53
SMX3P54999 PTC2YER089C 1395 nt11.74□□□□□ -0.53
SMX3P54999 GAR1YHR089C 618 nt11.73□□□□□ -0.53
SMX3P54999 SPT5YML010W 3192 nt11.65□□□□□ -0.55
SMX3P54999 YJR018WYJR018W 363 nt11.64□□□□□ -0.55
SMX3P54999 NAB2YGL122C 1578 nt11.63□□□□□ -0.55
SMX3P54999 SSA4YER103W 1929 nt11.58□□□□□ -0.56
SMX3P54999 ATS1YAL020C 1002 nt11.5□□□□□ -0.57
SMX3P54999 YER088W-BYER088W-B 147 nt11.48□□□□□ -0.57
SMX3P54999 FPR4YLR449W 1179 nt11.45□□□□□ -0.58
SMX3P54999 RSB1YOR049C 1065 nt11.41□□□□□ -0.58
SMX3P54999 DAL1YIR027C 1383 nt11.39□□□□□ -0.59
SMX3P54999 FIS1YIL065C 468 nt11.35□□□□□ -0.59
SMX3P54999 MEP2YNL142W 1500 nt11.34□□□□□ -0.59
SMX3P54999 RPP2BYDR382W 333 nt11.33□□□□□ -0.6
SMX3P54999 TIR1YER011W 765 nt11.32□□□□□ -0.6
SMX3P54999 INM2YDR287W 879 nt11.28□□□□□ -0.6
SMX3P54999 PHO4YFR034C 939 nt11.27□□□□□ -0.61
SMX3P54999 YJR120WYJR120W 351 nt11.24□□□□□ -0.61
SMX3P54999 SSA1YAL005C 1929 nt11.24□□□□□ -0.61
SMX3P54999 Q0182Q0182 405 nt11.2□□□□□ -0.62
SMX3P54999 YPS1YLR120C 1710 nt11.18□□□□□ -0.62
SMX3P54999 YHR165W-AYHR165W-A 312 nt11.18□□□□□ -0.62
SMX3P54999 DCW1YKL046C 1350 nt11.15□□□□□ -0.63
SMX3P54999 YBL100CYBL100C 315 nt11.11□□□□□ -0.63
SMX3P54999 BDF1YLR399C 2061 nt11.11□□□□□ -0.63
SMX3P54999 YMR090WYMR090W 684 nt11.05□□□□□ -0.64
SMX3P54999 YDR095CYDR095C 411 nt11.03□□□□□ -0.64
SMX3P54999 EMI2YDR516C 1503 nt11.01□□□□□ -0.65
SMX3P54999 TAT1YBR069C 1860 nt10.96□□□□□ -0.65
SMX3P54999 ALF1YNL148C 765 nt10.96□□□□□ -0.65
SMX3P54999 BDH2YAL061W 1254 nt10.95□□□□□ -0.66
SMX3P54999 FUN26YAL022C 1554 nt10.94□□□□□ -0.66
SMX3P54999 MOT3YMR070W 1473 nt10.94□□□□□ -0.66
SMX3P54999 YBR220CYBR220C 1683 nt10.91□□□□□ -0.66
SMX3P54999 SRB2YHR041C 633 nt10.9□□□□□ -0.66
SMX3P54999 TRM9YML014W 840 nt10.88□□□□□ -0.67
SMX3P54999 YDL221WYDL221W 552 nt10.87□□□□□ -0.67
SMX3P54999 RPP2AYOL039W 321 nt10.87□□□□□ -0.67
SMX3P54999 CAC2YML102W 1407 nt10.83□□□□□ -0.68
SMX3P54999 SDH1YKL148C 1923 nt10.82□□□□□ -0.68
SMX3P54999 PTP1YDL230W 1008 nt10.79□□□□□ -0.68
SMX3P54999 WWM1YFL010C 636 nt10.74□□□□□ -0.69
SMX3P54999 SUF2tP(AGG)C 72 nt10.73□□□□□ -0.69
SMX3P54999 SUF10tP(AGG)N 72 nt10.73□□□□□ -0.69
SMX3P54999 CCT6YDR188W 1641 nt10.71□□□□□ -0.69
SMX3P54999 SCC4YER147C 1875 nt10.71□□□□□ -0.69
SMX3P54999 LSM3YLR438C-A 270 nt10.71□□□□□ -0.69
SMX3P54999 PST2YDR032C 597 nt10.69□□□□□ -0.7
SMX3P54999 SIS1YNL007C 1059 nt10.68□□□□□ -0.7
SMX3P54999 IRC15YPL017C 1500 nt10.64□□□□□ -0.71
SMX3P54999 SEC11YIR022W 504 nt10.63□□□□□ -0.71
SMX3P54999 PAC11YDR488C 1602 nt10.62□□□□□ -0.71
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms