Protein–RNA interactions for Protein: P0CX25

RPL43A, 60S ribosomal protein L43-A, yeastyeast

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL43AP0CX25 YML009W-BYML009W-B 477 nt18.05■□□□□ 0.48
RPL43AP0CX25 NOP1YDL014W 984 nt17.84■□□□□ 0.45
RPL43AP0CX25 NSR1YGR159C 1245 nt17.37■□□□□ 0.37
RPL43AP0CX25 YKL036CYKL036C 393 nt17.05■□□□□ 0.32
RPL43AP0CX25 YJL027CYJL027C 417 nt16.03■□□□□ 0.16
RPL43AP0CX25 SCS3YGL126W 1143 nt15.83■□□□□ 0.12
RPL43AP0CX25 Q0297Q0297 156 nt15.8■□□□□ 0.12
RPL43AP0CX25 SRX1YKL086W 384 nt15.57■□□□□ 0.08
RPL43AP0CX25 SCJ1YMR214W 1134 nt14.88□□□□□ -0.03
RPL43AP0CX25 YCR051WYCR051W 669 nt14.81□□□□□ -0.04
RPL43AP0CX25 MDJ1YFL016C 1536 nt14.78□□□□□ -0.04
RPL43AP0CX25 YOL085CYOL085C 342 nt14.72□□□□□ -0.05
RPL43AP0CX25 PKP1YIL042C 1185 nt14.4□□□□□ -0.1
RPL43AP0CX25 ATS1YAL020C 1002 nt14.34□□□□□ -0.11
RPL43AP0CX25 RPP1BYDL130W 321 nt14.18□□□□□ -0.14
RPL43AP0CX25 TRN1tP(UGG)A 72 nt13.69□□□□□ -0.22
RPL43AP0CX25 SUF9tP(UGG)F 72 nt13.69□□□□□ -0.22
RPL43AP0CX25 SUF8tP(UGG)H 72 nt13.69□□□□□ -0.22
RPL43AP0CX25 tP(UGG)LtP(UGG)L 72 nt13.69□□□□□ -0.22
RPL43AP0CX25 SUF7tP(UGG)M 72 nt13.69□□□□□ -0.22
RPL43AP0CX25 tP(UGG)N1tP(UGG)N1 72 nt13.69□□□□□ -0.22
RPL43AP0CX25 tP(UGG)N2tP(UGG)N2 72 nt13.69□□□□□ -0.22
RPL43AP0CX25 tP(UGG)O1tP(UGG)O1 72 nt13.69□□□□□ -0.22
RPL43AP0CX25 SUF11tP(UGG)O2 72 nt13.69□□□□□ -0.22
RPL43AP0CX25 CCC1YLR220W 969 nt13.53□□□□□ -0.24
RPL43AP0CX25 SCR1SCR1 522 nt13.53□□□□□ -0.24
RPL43AP0CX25 RTC3YHR087W 336 nt13.47□□□□□ -0.25
RPL43AP0CX25 PET122YER153C 765 nt13.46□□□□□ -0.25
RPL43AP0CX25 DBP2YNL112W 1641 nt13.32□□□□□ -0.28
RPL43AP0CX25 tP(UGG)O3tP(UGG)O3 72 nt13.16□□□□□ -0.3
RPL43AP0CX25 PST2YDR032C 597 nt13.15□□□□□ -0.3
RPL43AP0CX25 RRN5YLR141W 1092 nt13.12□□□□□ -0.31
RPL43AP0CX25 RSB1YOR049C 1065 nt13.08□□□□□ -0.32
RPL43AP0CX25 YKL097CYKL097C 411 nt13.02□□□□□ -0.33
RPL43AP0CX25 YER088W-BYER088W-B 147 nt12.88□□□□□ -0.35
RPL43AP0CX25 RVS167YDR388W 1449 nt12.76□□□□□ -0.37
RPL43AP0CX25 YDJ1YNL064C 1230 nt12.74□□□□□ -0.37
RPL43AP0CX25 SHU1YHL006C 453 nt12.46□□□□□ -0.41
RPL43AP0CX25 YBR190WYBR190W 312 nt12.46□□□□□ -0.41
RPL43AP0CX25 SHR5YOL110W 714 nt12.45□□□□□ -0.42
RPL43AP0CX25 YOR139CYOR139C 393 nt12.33□□□□□ -0.44
RPL43AP0CX25 GAR1YHR089C 618 nt12.32□□□□□ -0.44
RPL43AP0CX25 NPL3YDR432W 1245 nt12.13□□□□□ -0.47
RPL43AP0CX25 YAL037C-BYAL037C-B 975 nt12.04□□□□□ -0.48
RPL43AP0CX25 TIR1YER011W 765 nt11.89□□□□□ -0.51
RPL43AP0CX25 DEP1YAL013W 1218 nt11.83□□□□□ -0.52
RPL43AP0CX25 tM(CAU)CtM(CAU)C 72 nt11.8□□□□□ -0.52
RPL43AP0CX25 IMT4tM(CAU)E 72 nt11.8□□□□□ -0.52
RPL43AP0CX25 IMT3tM(CAU)J3 72 nt11.8□□□□□ -0.52
RPL43AP0CX25 IMT1tM(CAU)O1 72 nt11.8□□□□□ -0.52
RPL43AP0CX25 IMT2tM(CAU)P 72 nt11.8□□□□□ -0.52
RPL43AP0CX25 YNL208WYNL208W 600 nt11.77□□□□□ -0.53
RPL43AP0CX25 YOL037CYOL037C 354 nt11.76□□□□□ -0.53
RPL43AP0CX25 BSC6YOL137W 1494 nt11.76□□□□□ -0.53
RPL43AP0CX25 RPN10YHR200W 807 nt11.75□□□□□ -0.53
RPL43AP0CX25 URN1YPR152C 1398 nt11.67□□□□□ -0.54
RPL43AP0CX25 YGR021WYGR021W 873 nt11.65□□□□□ -0.54
RPL43AP0CX25 MOT3YMR070W 1473 nt11.64□□□□□ -0.55
RPL43AP0CX25 MNP1YGL068W 585 nt11.64□□□□□ -0.55
RPL43AP0CX25 HOM6YJR139C 1080 nt11.61□□□□□ -0.55
RPL43AP0CX25 SSA1YAL005C 1929 nt11.58□□□□□ -0.55
RPL43AP0CX25 PUS2YGL063W 1113 nt11.49□□□□□ -0.57
RPL43AP0CX25 SRB2YHR041C 633 nt11.48□□□□□ -0.57
RPL43AP0CX25 WWM1YFL010C 636 nt11.46□□□□□ -0.57
RPL43AP0CX25 MRPL8YJL063C 717 nt11.45□□□□□ -0.58
RPL43AP0CX25 RKM5YLR137W 1104 nt11.45□□□□□ -0.58
RPL43AP0CX25 YLR281CYLR281C 468 nt11.39□□□□□ -0.59
RPL43AP0CX25 OPI9YLR338W 858 nt11.37□□□□□ -0.59
RPL43AP0CX25 YFL021C-AYFL021C-A 855 nt11.31□□□□□ -0.6
RPL43AP0CX25 WHI5YOR083W 888 nt11.25□□□□□ -0.61
RPL43AP0CX25 UBX6YJL048C 1191 nt11.23□□□□□ -0.61
RPL43AP0CX25 ADO1YJR105W 1023 nt11.23□□□□□ -0.61
RPL43AP0CX25 FMP45YDL222C 930 nt11.21□□□□□ -0.61
RPL43AP0CX25 RPP2BYDR382W 333 nt11.17□□□□□ -0.62
RPL43AP0CX25 YJR018WYJR018W 363 nt11.17□□□□□ -0.62
RPL43AP0CX25 YCH1YGR203W 447 nt11.15□□□□□ -0.62
RPL43AP0CX25 YJR120WYJR120W 351 nt11.12□□□□□ -0.63
RPL43AP0CX25 DSK2YMR276W 1122 nt11.11□□□□□ -0.63
RPL43AP0CX25 SAH1YER043C 1350 nt11.11□□□□□ -0.63
RPL43AP0CX25 YEL076C-AYEL076C-A 651 nt11.09□□□□□ -0.63
RPL43AP0CX25 YEL076CYEL076C 651 nt11.09□□□□□ -0.63
RPL43AP0CX25 YLR464WYLR464W 651 nt11.09□□□□□ -0.63
RPL43AP0CX25 PUN1YLR414C 792 nt11.08□□□□□ -0.64
RPL43AP0CX25 SSA3YBL075C 1950 nt11.07□□□□□ -0.64
RPL43AP0CX25 IMP2'YIL154C 1041 nt11.05□□□□□ -0.64
RPL43AP0CX25 YPR011CYPR011C 981 nt11.05□□□□□ -0.64
RPL43AP0CX25 BDH2YAL061W 1254 nt11.04□□□□□ -0.64
RPL43AP0CX25 YLR236CYLR236C 324 nt11.02□□□□□ -0.65
RPL43AP0CX25 LSM3YLR438C-A 270 nt11.02□□□□□ -0.65
RPL43AP0CX25 SIS1YNL007C 1059 nt10.91□□□□□ -0.66
RPL43AP0CX25 RTG1YOL067C 534 nt10.9□□□□□ -0.66
RPL43AP0CX25 YFL015W-AYFL015W-A 318 nt10.88□□□□□ -0.67
RPL43AP0CX25 YDR094WYDR094W 336 nt10.85□□□□□ -0.67
RPL43AP0CX25 SPP1YPL138C 1062 nt10.82□□□□□ -0.68
RPL43AP0CX25 YLR154C-GYLR154C-G 150 nt10.81□□□□□ -0.68
RPL43AP0CX25 LPX1YOR084W 1164 nt10.79□□□□□ -0.68
RPL43AP0CX25 PTC2YER089C 1395 nt10.78□□□□□ -0.68
RPL43AP0CX25 ERV46YAL042W 1248 nt10.78□□□□□ -0.68
RPL43AP0CX25 ARE1YCR048W 1833 nt10.78□□□□□ -0.68
RPL43AP0CX25 PUT4YOR348C 1884 nt10.77□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms