RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	YHR214C-E	Q8TGK0	99 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	TRA1	P38811	3744 aa		4.13	□□□□□ -1.75
SUP35	YDR172W	COX5B	P00425	151 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	MSW1	P04803	379 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	SEC22	P22214	214 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	VMA5	P31412	392 aa	Known RBP	4.12	□□□□□ -1.75
SUP35	YDR172W	VAM7	P32912	316 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	ARO9	P38840	513 aa	Predicted RBP	4.12	□□□□□ -1.75
SUP35	YDR172W	AAH1	P53909	347 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	RNH201	P53942	307 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	SAM50	P53969	484 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	YML108W	Q03759	105 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	MIX14	Q04341	121 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	HNT3	Q08702	217 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	TRM13	Q12383	476 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	EAF3	Q12432	401 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	ERP4	Q12450	207 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	YBR085C-A	O43137	85 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	YHR214C-D	P0CX93	97 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	TIP1	P27654	210 aa	Predicted RBP	4.12	□□□□□ -1.75
SUP35	YDR172W	MRPL36	P36531	177 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	SER3	P40054	469 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	ATF1	P40353	525 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	REE1	P40893	198 aa		4.12	□□□□□ -1.75
SUP35	YDR172W	VBA4	Q04602	768 aa	Known RBP	4.12	□□□□□ -1.75
SUP35	YDR172W	SEC16	P48415	2195 aa	Known RBP	4.11	□□□□□ -1.75
SUP35	YDR172W	YLR358C	O13565	187 aa		4.11	□□□□□ -1.75
SUP35	YDR172W	MDH2	P22133	377 aa		4.11	□□□□□ -1.75
SUP35	YDR172W	CAM1	P29547	415 aa	Known RBP	4.11	□□□□□ -1.75
SUP35	YDR172W	FMT1	P32785	401 aa		4.11	□□□□□ -1.75
SUP35	YDR172W	YBL010C	P32788	280 aa		4.11	□□□□□ -1.75
SUP35	YDR172W	NAT2	P37293	288 aa		4.11	□□□□□ -1.75
SUP35	YDR172W	PUG1	P40100	303 aa		4.11	□□□□□ -1.75
SUP35	YDR172W	UBP8	P50102	471 aa		4.11	□□□□□ -1.75
SUP35	YDR172W	YPL039W	Q03080	316 aa		4.11	□□□□□ -1.75
SUP35	YDR172W	GRC3	Q07845	632 aa		4.11	□□□□□ -1.75
SUP35	YDR172W	AEP3	Q12089	606 aa		4.11	□□□□□ -1.75
SUP35	YDR172W	YOR032W-A	Q8TGS1	66 aa		4.11	□□□□□ -1.75
SUP35	YDR172W	MES1	P00958	751 aa	Known RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	RFA1	P22336	621 aa	Known RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	EMP24	P32803	203 aa	Known RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	PPZ2	P33329	710 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	MSY1	P48527	492 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	MRP51	Q02950	344 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	SDC1	Q03323	175 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	YML018C	Q03730	393 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	HNT1	Q04344	158 aa	Known RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	TMA10	Q06177	86 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	ANT1	Q06497	328 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	SYM1	Q06563	197 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	MCT1	Q12283	360 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	TFC7	Q12415	435 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	ISA2	Q12425	185 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	TOR1	P35169	2470 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	TPI1	P00942	248 aa	Known RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	SCEI	P03882	235 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	YFR010W-A	P0C5N0	62 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	RPL40A	P0CH08	128 aa	Known RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	RPL40B	P0CH09	128 aa	Known RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	PDX1	P16451	410 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	CPR4	P25334	318 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	CPR3	P25719	182 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	SOF1	P33750	489 aa	Known RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	POP8	P38208	133 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	FIG1	P38224	298 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	SSO2	P39926	295 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	YMR144W	P40214	342 aa	Known RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	URM1	P40554	99 aa	Predicted RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	ECO1	P43605	281 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	LOH1	P47055	219 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	ADO1	P47143	340 aa	Known RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	UBC12	P52491	188 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	YGL159W	P53110	370 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	TIM44	Q01852	431 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	RSM10	Q03201	203 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	YDR248C	Q03786	193 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	NIP7	Q08962	181 aa	Known RBP	4.1	□□□□□ -1.75
SUP35	YDR172W	SRL2	Q12020	392 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	YIL002W-A	Q3E7Z5	69 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	PET20	Q99373	253 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	FLO9	P39712	1322 aa		4.1	□□□□□ -1.75
SUP35	YDR172W	RIP1	P08067	215 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	FUS3	P16892	353 aa	Known RBP	4.09	□□□□□ -1.75
SUP35	YDR172W	ERG8	P24521	451 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	SED4	P25365	1065 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	LDB16	P25587	256 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	RPD3	P32561	433 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	FLO10	P36170	1169 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	RIP-Chip
SUP35	YDR172W	SLZ1	P40167	298 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	YIL169C	P40442	995 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	BMT5	P40493	336 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	CTK2	P46962	323 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	GIM3	P53900	129 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	NRK1	P53915	240 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	YDR209C	Q03480	137 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	PRM4	Q12498	284 aa		4.09	□□□□□ -1.75
SUP35	YDR172W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.09	□□□□□ -1.75
SUP35	YDR172W	YLL053C	P0CD98	152 aa		4.09	□□□□□ -1.76
SUP35	YDR172W	RPS16A	P0CX51	143 aa	Known RBP	4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 167.6 ms