Protein–RNA interactions for Protein: Q03323

SDC1, COMPASS component SDC1, yeastyeast

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDC1Q03323 YML009W-BYML009W-B 477 nt18.39■□□□□ 0.53
SDC1Q03323 NSR1YGR159C 1245 nt18.23■□□□□ 0.51
SDC1Q03323 NOP1YDL014W 984 nt17.95■□□□□ 0.46
SDC1Q03323 YKL036CYKL036C 393 nt16.63■□□□□ 0.25
SDC1Q03323 MDJ1YFL016C 1536 nt16.04■□□□□ 0.16
SDC1Q03323 Q0297Q0297 156 nt15.74■□□□□ 0.11
SDC1Q03323 SRX1YKL086W 384 nt15.68■□□□□ 0.1
SDC1Q03323 YJL027CYJL027C 417 nt15.52■□□□□ 0.08
SDC1Q03323 SCS3YGL126W 1143 nt15.15■□□□□ 0.02
SDC1Q03323 YCR051WYCR051W 669 nt14.85□□□□□ -0.03
SDC1Q03323 YOL085CYOL085C 342 nt14.38□□□□□ -0.11
SDC1Q03323 DBP2YNL112W 1641 nt14.25□□□□□ -0.13
SDC1Q03323 PKP1YIL042C 1185 nt14.12□□□□□ -0.15
SDC1Q03323 RPP1BYDL130W 321 nt14.11□□□□□ -0.15
SDC1Q03323 TRN1tP(UGG)A 72 nt14.11□□□□□ -0.15
SDC1Q03323 SUF9tP(UGG)F 72 nt14.11□□□□□ -0.15
SDC1Q03323 SUF8tP(UGG)H 72 nt14.11□□□□□ -0.15
SDC1Q03323 tP(UGG)LtP(UGG)L 72 nt14.11□□□□□ -0.15
SDC1Q03323 SUF7tP(UGG)M 72 nt14.11□□□□□ -0.15
SDC1Q03323 tP(UGG)N1tP(UGG)N1 72 nt14.11□□□□□ -0.15
SDC1Q03323 tP(UGG)N2tP(UGG)N2 72 nt14.11□□□□□ -0.15
SDC1Q03323 tP(UGG)O1tP(UGG)O1 72 nt14.11□□□□□ -0.15
SDC1Q03323 SUF11tP(UGG)O2 72 nt14.11□□□□□ -0.15
SDC1Q03323 CCC1YLR220W 969 nt13.93□□□□□ -0.18
SDC1Q03323 YBR190WYBR190W 312 nt13.71□□□□□ -0.21
SDC1Q03323 ATS1YAL020C 1002 nt13.59□□□□□ -0.23
SDC1Q03323 SCJ1YMR214W 1134 nt13.59□□□□□ -0.23
SDC1Q03323 RVS167YDR388W 1449 nt13.46□□□□□ -0.26
SDC1Q03323 PET122YER153C 765 nt13.45□□□□□ -0.26
SDC1Q03323 tP(UGG)O3tP(UGG)O3 72 nt13.38□□□□□ -0.27
SDC1Q03323 RTC3YHR087W 336 nt13.38□□□□□ -0.27
SDC1Q03323 SCR1SCR1 522 nt13.37□□□□□ -0.27
SDC1Q03323 RRN5YLR141W 1092 nt13.08□□□□□ -0.32
SDC1Q03323 SHR5YOL110W 714 nt13.01□□□□□ -0.33
SDC1Q03323 YDJ1YNL064C 1230 nt12.96□□□□□ -0.33
SDC1Q03323 RSB1YOR049C 1065 nt12.83□□□□□ -0.36
SDC1Q03323 YER088W-BYER088W-B 147 nt12.82□□□□□ -0.36
SDC1Q03323 GAR1YHR089C 618 nt12.62□□□□□ -0.39
SDC1Q03323 PST2YDR032C 597 nt12.57□□□□□ -0.4
SDC1Q03323 URN1YPR152C 1398 nt12.56□□□□□ -0.4
SDC1Q03323 DEP1YAL013W 1218 nt12.55□□□□□ -0.4
SDC1Q03323 RPN10YHR200W 807 nt12.44□□□□□ -0.42
SDC1Q03323 YNL208WYNL208W 600 nt12.42□□□□□ -0.42
SDC1Q03323 OPI9YLR338W 858 nt12.38□□□□□ -0.43
SDC1Q03323 PUT4YOR348C 1884 nt12.36□□□□□ -0.43
SDC1Q03323 SAH1YER043C 1350 nt12.25□□□□□ -0.45
SDC1Q03323 TIR1YER011W 765 nt12.21□□□□□ -0.45
SDC1Q03323 ARE1YCR048W 1833 nt12.16□□□□□ -0.46
SDC1Q03323 YKL097CYKL097C 411 nt12.12□□□□□ -0.47
SDC1Q03323 PUN1YLR414C 792 nt12.04□□□□□ -0.48
SDC1Q03323 SSA1YAL005C 1929 nt12.02□□□□□ -0.49
SDC1Q03323 SHU1YHL006C 453 nt12.02□□□□□ -0.49
SDC1Q03323 YJR018WYJR018W 363 nt12□□□□□ -0.49
SDC1Q03323 YHR049C-AYHR049C-A 297 nt11.99□□□□□ -0.49
SDC1Q03323 POA1YBR022W 534 nt11.96□□□□□ -0.49
SDC1Q03323 PTC2YER089C 1395 nt11.83□□□□□ -0.52
SDC1Q03323 RPP2BYDR382W 333 nt11.81□□□□□ -0.52
SDC1Q03323 YJR120WYJR120W 351 nt11.81□□□□□ -0.52
SDC1Q03323 SRB2YHR041C 633 nt11.8□□□□□ -0.52
SDC1Q03323 YAL037C-BYAL037C-B 975 nt11.78□□□□□ -0.52
SDC1Q03323 BUD23YCR047C 828 nt11.72□□□□□ -0.53
SDC1Q03323 NAB2YGL122C 1578 nt11.7□□□□□ -0.54
SDC1Q03323 BSC6YOL137W 1494 nt11.69□□□□□ -0.54
SDC1Q03323 YGR021WYGR021W 873 nt11.68□□□□□ -0.54
SDC1Q03323 WWM1YFL010C 636 nt11.67□□□□□ -0.54
SDC1Q03323 HOM6YJR139C 1080 nt11.61□□□□□ -0.55
SDC1Q03323 YOR139CYOR139C 393 nt11.6□□□□□ -0.55
SDC1Q03323 INM2YDR287W 879 nt11.59□□□□□ -0.55
SDC1Q03323 BDH2YAL061W 1254 nt11.58□□□□□ -0.56
SDC1Q03323 DAL1YIR027C 1383 nt11.56□□□□□ -0.56
SDC1Q03323 MNP1YGL068W 585 nt11.53□□□□□ -0.56
SDC1Q03323 YFL021C-AYFL021C-A 855 nt11.52□□□□□ -0.57
SDC1Q03323 FIS1YIL065C 468 nt11.52□□□□□ -0.57
SDC1Q03323 NPL3YDR432W 1245 nt11.51□□□□□ -0.57
SDC1Q03323 SSA3YBL075C 1950 nt11.5□□□□□ -0.57
SDC1Q03323 FPR4YLR449W 1179 nt11.5□□□□□ -0.57
SDC1Q03323 YBL100CYBL100C 315 nt11.47□□□□□ -0.57
SDC1Q03323 LSM3YLR438C-A 270 nt11.46□□□□□ -0.57
SDC1Q03323 PHO4YFR034C 939 nt11.44□□□□□ -0.58
SDC1Q03323 RKM5YLR137W 1104 nt11.44□□□□□ -0.58
SDC1Q03323 YOL037CYOL037C 354 nt11.44□□□□□ -0.58
SDC1Q03323 TRM9YML014W 840 nt11.34□□□□□ -0.59
SDC1Q03323 FUN26YAL022C 1554 nt11.33□□□□□ -0.6
SDC1Q03323 CCT6YDR188W 1641 nt11.23□□□□□ -0.61
SDC1Q03323 YPS1YLR120C 1710 nt11.18□□□□□ -0.62
SDC1Q03323 ALF1YNL148C 765 nt11.16□□□□□ -0.62
SDC1Q03323 tM(CAU)CtM(CAU)C 72 nt11.15□□□□□ -0.62
SDC1Q03323 IMT4tM(CAU)E 72 nt11.15□□□□□ -0.62
SDC1Q03323 IMT3tM(CAU)J3 72 nt11.15□□□□□ -0.62
SDC1Q03323 IMT1tM(CAU)O1 72 nt11.15□□□□□ -0.62
SDC1Q03323 IMT2tM(CAU)P 72 nt11.15□□□□□ -0.62
SDC1Q03323 SUF2tP(AGG)C 72 nt11.14□□□□□ -0.63
SDC1Q03323 SUF10tP(AGG)N 72 nt11.14□□□□□ -0.63
SDC1Q03323 YLR281CYLR281C 468 nt11.14□□□□□ -0.63
SDC1Q03323 YDR095CYDR095C 411 nt11.13□□□□□ -0.63
SDC1Q03323 WHI5YOR083W 888 nt11.09□□□□□ -0.63
SDC1Q03323 SPT5YML010W 3192 nt11.06□□□□□ -0.64
SDC1Q03323 PUS2YGL063W 1113 nt11.05□□□□□ -0.64
SDC1Q03323 YHR165W-AYHR165W-A 312 nt11.05□□□□□ -0.64
SDC1Q03323 YLR154C-GYLR154C-G 150 nt11.01□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms