Protein–RNA interactions for Protein: P25365

SED4, Putative guanine nucleotide-exchange factor SED4, yeastyeast

Predictions only

Length 1,065 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SED4P25365 YML009W-BYML009W-B 477 nt17.88■□□□□ 0.45
SED4P25365 NSR1YGR159C 1245 nt17.86■□□□□ 0.45
SED4P25365 NOP1YDL014W 984 nt17.4■□□□□ 0.38
SED4P25365 YKL036CYKL036C 393 nt16.01■□□□□ 0.15
SED4P25365 MDJ1YFL016C 1536 nt15.86■□□□□ 0.13
SED4P25365 Q0297Q0297 156 nt15.24■□□□□ 0.03
SED4P25365 SRX1YKL086W 384 nt15.21■□□□□ 0.03
SED4P25365 YJL027CYJL027C 417 nt14.92□□□□□ -0.02
SED4P25365 SCS3YGL126W 1143 nt14.54□□□□□ -0.08
SED4P25365 YCR051WYCR051W 669 nt14.38□□□□□ -0.11
SED4P25365 DBP2YNL112W 1641 nt14.06□□□□□ -0.16
SED4P25365 YOL085CYOL085C 342 nt13.87□□□□□ -0.19
SED4P25365 SSA3YBL075C 1950 nt13.83□□□□□ -0.19
SED4P25365 TRN1tP(UGG)A 72 nt13.79□□□□□ -0.2
SED4P25365 SUF9tP(UGG)F 72 nt13.79□□□□□ -0.2
SED4P25365 SUF8tP(UGG)H 72 nt13.79□□□□□ -0.2
SED4P25365 tP(UGG)LtP(UGG)L 72 nt13.79□□□□□ -0.2
SED4P25365 SUF7tP(UGG)M 72 nt13.79□□□□□ -0.2
SED4P25365 tP(UGG)N1tP(UGG)N1 72 nt13.79□□□□□ -0.2
SED4P25365 tP(UGG)N2tP(UGG)N2 72 nt13.79□□□□□ -0.2
SED4P25365 tP(UGG)O1tP(UGG)O1 72 nt13.79□□□□□ -0.2
SED4P25365 SUF11tP(UGG)O2 72 nt13.79□□□□□ -0.2
SED4P25365 RPP1BYDL130W 321 nt13.66□□□□□ -0.22
SED4P25365 PKP1YIL042C 1185 nt13.63□□□□□ -0.23
SED4P25365 CCC1YLR220W 969 nt13.59□□□□□ -0.23
SED4P25365 YBR190WYBR190W 312 nt13.57□□□□□ -0.24
SED4P25365 RTC3YHR087W 336 nt13.21□□□□□ -0.29
SED4P25365 RVS167YDR388W 1449 nt13.18□□□□□ -0.3
SED4P25365 SCJ1YMR214W 1134 nt13.11□□□□□ -0.31
SED4P25365 PET122YER153C 765 nt13.04□□□□□ -0.32
SED4P25365 tP(UGG)O3tP(UGG)O3 72 nt13.02□□□□□ -0.33
SED4P25365 ATS1YAL020C 1002 nt13□□□□□ -0.33
SED4P25365 SCR1SCR1 522 nt12.89□□□□□ -0.35
SED4P25365 SHR5YOL110W 714 nt12.73□□□□□ -0.37
SED4P25365 RRN5YLR141W 1092 nt12.66□□□□□ -0.38
SED4P25365 YDJ1YNL064C 1230 nt12.61□□□□□ -0.39
SED4P25365 Q0182Q0182 405 nt12.56□□□□□ -0.4
SED4P25365 YER088W-BYER088W-B 147 nt12.42□□□□□ -0.42
SED4P25365 URN1YPR152C 1398 nt12.39□□□□□ -0.43
SED4P25365 RSB1YOR049C 1065 nt12.37□□□□□ -0.43
SED4P25365 PUT4YOR348C 1884 nt12.37□□□□□ -0.43
SED4P25365 DEP1YAL013W 1218 nt12.33□□□□□ -0.44
SED4P25365 GAR1YHR089C 618 nt12.29□□□□□ -0.44
SED4P25365 OPI9YLR338W 858 nt12.22□□□□□ -0.45
SED4P25365 RPN10YHR200W 807 nt12.18□□□□□ -0.46
SED4P25365 YNL208WYNL208W 600 nt12.18□□□□□ -0.46
SED4P25365 SAH1YER043C 1350 nt12.14□□□□□ -0.47
SED4P25365 ARE1YCR048W 1833 nt12.13□□□□□ -0.47
SED4P25365 PST2YDR032C 597 nt12.07□□□□□ -0.48
SED4P25365 SPT5YML010W 3192 nt12□□□□□ -0.49
SED4P25365 POA1YBR022W 534 nt11.95□□□□□ -0.5
SED4P25365 YHR049C-AYHR049C-A 297 nt11.94□□□□□ -0.5
SED4P25365 MOT3YMR070W 1473 nt11.94□□□□□ -0.5
SED4P25365 SSA4YER103W 1929 nt11.92□□□□□ -0.5
SED4P25365 TIR1YER011W 765 nt11.9□□□□□ -0.5
SED4P25365 PUN1YLR414C 792 nt11.86□□□□□ -0.51
SED4P25365 YJR018WYJR018W 363 nt11.81□□□□□ -0.52
SED4P25365 SSA1YAL005C 1929 nt11.78□□□□□ -0.52
SED4P25365 BSC6YOL137W 1494 nt11.76□□□□□ -0.53
SED4P25365 PTC2YER089C 1395 nt11.71□□□□□ -0.53
SED4P25365 PAC11YDR488C 1602 nt11.68□□□□□ -0.54
SED4P25365 YJR120WYJR120W 351 nt11.64□□□□□ -0.55
SED4P25365 BUD23YCR047C 828 nt11.63□□□□□ -0.55
SED4P25365 BDF1YLR399C 2061 nt11.6□□□□□ -0.55
SED4P25365 NAB2YGL122C 1578 nt11.59□□□□□ -0.55
SED4P25365 SRB2YHR041C 633 nt11.57□□□□□ -0.56
SED4P25365 RPP2BYDR382W 333 nt11.56□□□□□ -0.56
SED4P25365 SHU1YHL006C 453 nt11.56□□□□□ -0.56
SED4P25365 YKL097CYKL097C 411 nt11.54□□□□□ -0.56
SED4P25365 FIS1YIL065C 468 nt11.42□□□□□ -0.58
SED4P25365 DAL1YIR027C 1383 nt11.41□□□□□ -0.58
SED4P25365 NVJ2YPR091C 2313 nt11.41□□□□□ -0.58
SED4P25365 TAT1YBR069C 1860 nt11.41□□□□□ -0.58
SED4P25365 INM2YDR287W 879 nt11.41□□□□□ -0.58
SED4P25365 YAL037C-BYAL037C-B 975 nt11.37□□□□□ -0.59
SED4P25365 WWM1YFL010C 636 nt11.36□□□□□ -0.59
SED4P25365 FPR4YLR449W 1179 nt11.35□□□□□ -0.59
SED4P25365 BDH2YAL061W 1254 nt11.34□□□□□ -0.59
SED4P25365 PHO4YFR034C 939 nt11.31□□□□□ -0.6
SED4P25365 YGR021WYGR021W 873 nt11.31□□□□□ -0.6
SED4P25365 YBL100CYBL100C 315 nt11.28□□□□□ -0.6
SED4P25365 HOM6YJR139C 1080 nt11.27□□□□□ -0.61
SED4P25365 FPS1YLL043W 2010 nt11.23□□□□□ -0.61
SED4P25365 YFL021C-AYFL021C-A 855 nt11.2□□□□□ -0.62
SED4P25365 LSM3YLR438C-A 270 nt11.19□□□□□ -0.62
SED4P25365 MNP1YGL068W 585 nt11.17□□□□□ -0.62
SED4P25365 FUN26YAL022C 1554 nt11.15□□□□□ -0.62
SED4P25365 MEP2YNL142W 1500 nt11.14□□□□□ -0.63
SED4P25365 YPS1YLR120C 1710 nt11.12□□□□□ -0.63
SED4P25365 TRM9YML014W 840 nt11.11□□□□□ -0.63
SED4P25365 RKM5YLR137W 1104 nt11.1□□□□□ -0.63
SED4P25365 YOR139CYOR139C 393 nt11.1□□□□□ -0.63
SED4P25365 CCT6YDR188W 1641 nt11.05□□□□□ -0.64
SED4P25365 YDR095CYDR095C 411 nt11.04□□□□□ -0.64
SED4P25365 YOL037CYOL037C 354 nt11.01□□□□□ -0.65
SED4P25365 NPL3YDR432W 1245 nt10.99□□□□□ -0.65
SED4P25365 ALF1YNL148C 765 nt10.98□□□□□ -0.65
SED4P25365 YHR165W-AYHR165W-A 312 nt10.97□□□□□ -0.65
SED4P25365 DCW1YKL046C 1350 nt10.96□□□□□ -0.65
SED4P25365 SUF2tP(AGG)C 72 nt10.92□□□□□ -0.66
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms