Protein–RNA interactions for Protein: Q04602

VBA4, Vacuolar basic amino acid transporter 4, yeastyeast

Known RBP Predictions only

Length 768 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VBA4Q04602 YML009W-BYML009W-B 477 nt18.26■□□□□ 0.51
VBA4Q04602 NSR1YGR159C 1245 nt18.13■□□□□ 0.49
VBA4Q04602 NOP1YDL014W 984 nt17.75■□□□□ 0.43
VBA4Q04602 YKL036CYKL036C 393 nt16.35■□□□□ 0.21
VBA4Q04602 MDJ1YFL016C 1536 nt16.1■□□□□ 0.17
VBA4Q04602 Q0297Q0297 156 nt15.5■□□□□ 0.07
VBA4Q04602 SRX1YKL086W 384 nt15.48■□□□□ 0.07
VBA4Q04602 YJL027CYJL027C 417 nt15.27■□□□□ 0.04
VBA4Q04602 SCS3YGL126W 1143 nt14.85□□□□□ -0.03
VBA4Q04602 YCR051WYCR051W 669 nt14.71□□□□□ -0.05
VBA4Q04602 DBP2YNL112W 1641 nt14.21□□□□□ -0.13
VBA4Q04602 YOL085CYOL085C 342 nt14.14□□□□□ -0.15
VBA4Q04602 TRN1tP(UGG)A 72 nt14□□□□□ -0.17
VBA4Q04602 SUF9tP(UGG)F 72 nt14□□□□□ -0.17
VBA4Q04602 SUF8tP(UGG)H 72 nt14□□□□□ -0.17
VBA4Q04602 tP(UGG)LtP(UGG)L 72 nt14□□□□□ -0.17
VBA4Q04602 SUF7tP(UGG)M 72 nt14□□□□□ -0.17
VBA4Q04602 tP(UGG)N1tP(UGG)N1 72 nt14□□□□□ -0.17
VBA4Q04602 tP(UGG)N2tP(UGG)N2 72 nt14□□□□□ -0.17
VBA4Q04602 tP(UGG)O1tP(UGG)O1 72 nt14□□□□□ -0.17
VBA4Q04602 SUF11tP(UGG)O2 72 nt14□□□□□ -0.17
VBA4Q04602 PKP1YIL042C 1185 nt13.94□□□□□ -0.18
VBA4Q04602 RPP1BYDL130W 321 nt13.92□□□□□ -0.18
VBA4Q04602 CCC1YLR220W 969 nt13.89□□□□□ -0.19
VBA4Q04602 YBR190WYBR190W 312 nt13.74□□□□□ -0.21
VBA4Q04602 RTC3YHR087W 336 nt13.47□□□□□ -0.25
VBA4Q04602 RVS167YDR388W 1449 nt13.43□□□□□ -0.26
VBA4Q04602 SSA3YBL075C 1950 nt13.32□□□□□ -0.28
VBA4Q04602 SCJ1YMR214W 1134 nt13.31□□□□□ -0.28
VBA4Q04602 PET122YER153C 765 nt13.29□□□□□ -0.28
VBA4Q04602 ATS1YAL020C 1002 nt13.28□□□□□ -0.28
VBA4Q04602 tP(UGG)O3tP(UGG)O3 72 nt13.25□□□□□ -0.29
VBA4Q04602 SCR1SCR1 522 nt13.18□□□□□ -0.3
VBA4Q04602 SHR5YOL110W 714 nt12.93□□□□□ -0.34
VBA4Q04602 RRN5YLR141W 1092 nt12.91□□□□□ -0.34
VBA4Q04602 YDJ1YNL064C 1230 nt12.81□□□□□ -0.36
VBA4Q04602 RSB1YOR049C 1065 nt12.67□□□□□ -0.38
VBA4Q04602 YER088W-BYER088W-B 147 nt12.65□□□□□ -0.38
VBA4Q04602 PUT4YOR348C 1884 nt12.59□□□□□ -0.39
VBA4Q04602 URN1YPR152C 1398 nt12.58□□□□□ -0.4
VBA4Q04602 DEP1YAL013W 1218 nt12.58□□□□□ -0.4
VBA4Q04602 GAR1YHR089C 618 nt12.55□□□□□ -0.4
VBA4Q04602 Q0182Q0182 405 nt12.53□□□□□ -0.4
VBA4Q04602 RPN10YHR200W 807 nt12.42□□□□□ -0.42
VBA4Q04602 OPI9YLR338W 858 nt12.39□□□□□ -0.43
VBA4Q04602 YNL208WYNL208W 600 nt12.38□□□□□ -0.43
VBA4Q04602 SAH1YER043C 1350 nt12.31□□□□□ -0.44
VBA4Q04602 PST2YDR032C 597 nt12.29□□□□□ -0.44
VBA4Q04602 ARE1YCR048W 1833 nt12.23□□□□□ -0.45
VBA4Q04602 POA1YBR022W 534 nt12.14□□□□□ -0.47
VBA4Q04602 TIR1YER011W 765 nt12.12□□□□□ -0.47
VBA4Q04602 YHR049C-AYHR049C-A 297 nt12.1□□□□□ -0.47
VBA4Q04602 MOT3YMR070W 1473 nt12.08□□□□□ -0.47
VBA4Q04602 PUN1YLR414C 792 nt12.05□□□□□ -0.48
VBA4Q04602 YJR018WYJR018W 363 nt12.01□□□□□ -0.49
VBA4Q04602 BSC6YOL137W 1494 nt12.01□□□□□ -0.49
VBA4Q04602 SSA1YAL005C 1929 nt11.95□□□□□ -0.5
VBA4Q04602 SPT5YML010W 3192 nt11.9□□□□□ -0.5
VBA4Q04602 PTC2YER089C 1395 nt11.9□□□□□ -0.5
VBA4Q04602 BUD23YCR047C 828 nt11.85□□□□□ -0.51
VBA4Q04602 YKL097CYKL097C 411 nt11.83□□□□□ -0.52
VBA4Q04602 SSA4YER103W 1929 nt11.82□□□□□ -0.52
VBA4Q04602 SHU1YHL006C 453 nt11.8□□□□□ -0.52
VBA4Q04602 RPP2BYDR382W 333 nt11.79□□□□□ -0.52
VBA4Q04602 YJR120WYJR120W 351 nt11.77□□□□□ -0.53
VBA4Q04602 NAB2YGL122C 1578 nt11.74□□□□□ -0.53
VBA4Q04602 SRB2YHR041C 633 nt11.72□□□□□ -0.53
VBA4Q04602 YAL037C-BYAL037C-B 975 nt11.63□□□□□ -0.55
VBA4Q04602 FPR4YLR449W 1179 nt11.59□□□□□ -0.55
VBA4Q04602 DAL1YIR027C 1383 nt11.58□□□□□ -0.56
VBA4Q04602 INM2YDR287W 879 nt11.58□□□□□ -0.56
VBA4Q04602 WWM1YFL010C 636 nt11.58□□□□□ -0.56
VBA4Q04602 FIS1YIL065C 468 nt11.55□□□□□ -0.56
VBA4Q04602 YGR021WYGR021W 873 nt11.53□□□□□ -0.56
VBA4Q04602 BDH2YAL061W 1254 nt11.52□□□□□ -0.57
VBA4Q04602 PHO4YFR034C 939 nt11.47□□□□□ -0.57
VBA4Q04602 YBL100CYBL100C 315 nt11.47□□□□□ -0.57
VBA4Q04602 HOM6YJR139C 1080 nt11.45□□□□□ -0.58
VBA4Q04602 BDF1YLR399C 2061 nt11.42□□□□□ -0.58
VBA4Q04602 YFL021C-AYFL021C-A 855 nt11.4□□□□□ -0.58
VBA4Q04602 MNP1YGL068W 585 nt11.4□□□□□ -0.58
VBA4Q04602 LSM3YLR438C-A 270 nt11.37□□□□□ -0.59
VBA4Q04602 MEP2YNL142W 1500 nt11.35□□□□□ -0.59
VBA4Q04602 TRM9YML014W 840 nt11.33□□□□□ -0.6
VBA4Q04602 FUN26YAL022C 1554 nt11.33□□□□□ -0.6
VBA4Q04602 YOR139CYOR139C 393 nt11.32□□□□□ -0.6
VBA4Q04602 RKM5YLR137W 1104 nt11.29□□□□□ -0.6
VBA4Q04602 NPL3YDR432W 1245 nt11.28□□□□□ -0.6
VBA4Q04602 TAT1YBR069C 1860 nt11.26□□□□□ -0.61
VBA4Q04602 YPS1YLR120C 1710 nt11.23□□□□□ -0.61
VBA4Q04602 YOL037CYOL037C 354 nt11.23□□□□□ -0.61
VBA4Q04602 ALF1YNL148C 765 nt11.2□□□□□ -0.62
VBA4Q04602 CCT6YDR188W 1641 nt11.18□□□□□ -0.62
VBA4Q04602 YDR095CYDR095C 411 nt11.17□□□□□ -0.62
VBA4Q04602 YHR165W-AYHR165W-A 312 nt11.15□□□□□ -0.62
VBA4Q04602 DCW1YKL046C 1350 nt11.13□□□□□ -0.63
VBA4Q04602 SUF2tP(AGG)C 72 nt11.12□□□□□ -0.63
VBA4Q04602 SUF10tP(AGG)N 72 nt11.12□□□□□ -0.63
VBA4Q04602 FPS1YLL043W 2010 nt11.11□□□□□ -0.63
VBA4Q04602 PAC11YDR488C 1602 nt11.03□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms