Protein–RNA interactions for Protein: Q03080

YPL039W, Uncharacterized protein YPL039W, yeastyeast

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPL039WQ03080 YML009W-BYML009W-B 477 nt18.36■□□□□ 0.53
YPL039WQ03080 NSR1YGR159C 1245 nt18.25■□□□□ 0.51
YPL039WQ03080 NOP1YDL014W 984 nt17.91■□□□□ 0.46
YPL039WQ03080 YKL036CYKL036C 393 nt16.51■□□□□ 0.23
YPL039WQ03080 MDJ1YFL016C 1536 nt16.11■□□□□ 0.17
YPL039WQ03080 Q0297Q0297 156 nt15.64■□□□□ 0.09
YPL039WQ03080 SRX1YKL086W 384 nt15.61■□□□□ 0.09
YPL039WQ03080 YJL027CYJL027C 417 nt15.42■□□□□ 0.06
YPL039WQ03080 SCS3YGL126W 1143 nt14.99□□□□□ -0.01
YPL039WQ03080 YCR051WYCR051W 669 nt14.81□□□□□ -0.04
YPL039WQ03080 YOL085CYOL085C 342 nt14.26□□□□□ -0.13
YPL039WQ03080 DBP2YNL112W 1641 nt14.24□□□□□ -0.13
YPL039WQ03080 TRN1tP(UGG)A 72 nt14.08□□□□□ -0.16
YPL039WQ03080 SUF9tP(UGG)F 72 nt14.08□□□□□ -0.16
YPL039WQ03080 SUF8tP(UGG)H 72 nt14.08□□□□□ -0.16
YPL039WQ03080 tP(UGG)LtP(UGG)L 72 nt14.08□□□□□ -0.16
YPL039WQ03080 SUF7tP(UGG)M 72 nt14.08□□□□□ -0.16
YPL039WQ03080 tP(UGG)N1tP(UGG)N1 72 nt14.08□□□□□ -0.16
YPL039WQ03080 tP(UGG)N2tP(UGG)N2 72 nt14.08□□□□□ -0.16
YPL039WQ03080 tP(UGG)O1tP(UGG)O1 72 nt14.08□□□□□ -0.16
YPL039WQ03080 SUF11tP(UGG)O2 72 nt14.08□□□□□ -0.16
YPL039WQ03080 RPP1BYDL130W 321 nt14.03□□□□□ -0.16
YPL039WQ03080 PKP1YIL042C 1185 nt14.03□□□□□ -0.16
YPL039WQ03080 CCC1YLR220W 969 nt13.94□□□□□ -0.18
YPL039WQ03080 YBR190WYBR190W 312 nt13.79□□□□□ -0.2
YPL039WQ03080 RVS167YDR388W 1449 nt13.52□□□□□ -0.25
YPL039WQ03080 RTC3YHR087W 336 nt13.5□□□□□ -0.25
YPL039WQ03080 ATS1YAL020C 1002 nt13.42□□□□□ -0.26
YPL039WQ03080 PET122YER153C 765 nt13.37□□□□□ -0.27
YPL039WQ03080 SCJ1YMR214W 1134 nt13.37□□□□□ -0.27
YPL039WQ03080 tP(UGG)O3tP(UGG)O3 72 nt13.33□□□□□ -0.28
YPL039WQ03080 SCR1SCR1 522 nt13.32□□□□□ -0.28
YPL039WQ03080 SHR5YOL110W 714 nt13.01□□□□□ -0.33
YPL039WQ03080 RRN5YLR141W 1092 nt13□□□□□ -0.33
YPL039WQ03080 YDJ1YNL064C 1230 nt12.92□□□□□ -0.34
YPL039WQ03080 RSB1YOR049C 1065 nt12.76□□□□□ -0.37
YPL039WQ03080 YER088W-BYER088W-B 147 nt12.74□□□□□ -0.37
YPL039WQ03080 URN1YPR152C 1398 nt12.62□□□□□ -0.39
YPL039WQ03080 GAR1YHR089C 618 nt12.61□□□□□ -0.39
YPL039WQ03080 DEP1YAL013W 1218 nt12.59□□□□□ -0.39
YPL039WQ03080 RPN10YHR200W 807 nt12.51□□□□□ -0.41
YPL039WQ03080 YNL208WYNL208W 600 nt12.45□□□□□ -0.42
YPL039WQ03080 OPI9YLR338W 858 nt12.44□□□□□ -0.42
YPL039WQ03080 PUT4YOR348C 1884 nt12.44□□□□□ -0.42
YPL039WQ03080 PST2YDR032C 597 nt12.42□□□□□ -0.42
YPL039WQ03080 SAH1YER043C 1350 nt12.32□□□□□ -0.44
YPL039WQ03080 SSA3YBL075C 1950 nt12.3□□□□□ -0.44
YPL039WQ03080 ARE1YCR048W 1833 nt12.22□□□□□ -0.45
YPL039WQ03080 TIR1YER011W 765 nt12.19□□□□□ -0.46
YPL039WQ03080 PUN1YLR414C 792 nt12.11□□□□□ -0.47
YPL039WQ03080 YHR049C-AYHR049C-A 297 nt12.1□□□□□ -0.47
YPL039WQ03080 POA1YBR022W 534 nt12.08□□□□□ -0.48
YPL039WQ03080 YJR018WYJR018W 363 nt12.05□□□□□ -0.48
YPL039WQ03080 SSA1YAL005C 1929 nt11.99□□□□□ -0.49
YPL039WQ03080 YKL097CYKL097C 411 nt11.98□□□□□ -0.49
YPL039WQ03080 PTC2YER089C 1395 nt11.92□□□□□ -0.5
YPL039WQ03080 SHU1YHL006C 453 nt11.89□□□□□ -0.51
YPL039WQ03080 RPP2BYDR382W 333 nt11.87□□□□□ -0.51
YPL039WQ03080 BUD23YCR047C 828 nt11.84□□□□□ -0.51
YPL039WQ03080 BSC6YOL137W 1494 nt11.8□□□□□ -0.52
YPL039WQ03080 YJR120WYJR120W 351 nt11.78□□□□□ -0.52
YPL039WQ03080 NAB2YGL122C 1578 nt11.78□□□□□ -0.52
YPL039WQ03080 SRB2YHR041C 633 nt11.73□□□□□ -0.53
YPL039WQ03080 YAL037C-BYAL037C-B 975 nt11.69□□□□□ -0.54
YPL039WQ03080 INM2YDR287W 879 nt11.65□□□□□ -0.54
YPL039WQ03080 YGR021WYGR021W 873 nt11.64□□□□□ -0.55
YPL039WQ03080 WWM1YFL010C 636 nt11.63□□□□□ -0.55
YPL039WQ03080 DAL1YIR027C 1383 nt11.63□□□□□ -0.55
YPL039WQ03080 FPR4YLR449W 1179 nt11.6□□□□□ -0.55
YPL039WQ03080 BDH2YAL061W 1254 nt11.59□□□□□ -0.55
YPL039WQ03080 FIS1YIL065C 468 nt11.56□□□□□ -0.56
YPL039WQ03080 HOM6YJR139C 1080 nt11.54□□□□□ -0.56
YPL039WQ03080 YBL100CYBL100C 315 nt11.52□□□□□ -0.57
YPL039WQ03080 YFL021C-AYFL021C-A 855 nt11.49□□□□□ -0.57
YPL039WQ03080 PHO4YFR034C 939 nt11.49□□□□□ -0.57
YPL039WQ03080 LSM3YLR438C-A 270 nt11.47□□□□□ -0.57
YPL039WQ03080 MNP1YGL068W 585 nt11.46□□□□□ -0.57
YPL039WQ03080 YOR139CYOR139C 393 nt11.43□□□□□ -0.58
YPL039WQ03080 NPL3YDR432W 1245 nt11.41□□□□□ -0.58
YPL039WQ03080 TRM9YML014W 840 nt11.39□□□□□ -0.59
YPL039WQ03080 RKM5YLR137W 1104 nt11.38□□□□□ -0.59
YPL039WQ03080 FUN26YAL022C 1554 nt11.37□□□□□ -0.59
YPL039WQ03080 YOL037CYOL037C 354 nt11.36□□□□□ -0.59
YPL039WQ03080 SPT5YML010W 3192 nt11.34□□□□□ -0.59
YPL039WQ03080 YPS1YLR120C 1710 nt11.26□□□□□ -0.61
YPL039WQ03080 ALF1YNL148C 765 nt11.25□□□□□ -0.61
YPL039WQ03080 CCT6YDR188W 1641 nt11.24□□□□□ -0.61
YPL039WQ03080 SUF2tP(AGG)C 72 nt11.21□□□□□ -0.61
YPL039WQ03080 SUF10tP(AGG)N 72 nt11.21□□□□□ -0.61
YPL039WQ03080 YDR095CYDR095C 411 nt11.2□□□□□ -0.62
YPL039WQ03080 YHR165W-AYHR165W-A 312 nt11.16□□□□□ -0.62
YPL039WQ03080 MEP2YNL142W 1500 nt11.08□□□□□ -0.64
YPL039WQ03080 SSA4YER103W 1929 nt11.07□□□□□ -0.64
YPL039WQ03080 YLR281CYLR281C 468 nt11.05□□□□□ -0.64
YPL039WQ03080 SIS1YNL007C 1059 nt11.03□□□□□ -0.64
YPL039WQ03080 WHI5YOR083W 888 nt11.01□□□□□ -0.65
YPL039WQ03080 tM(CAU)CtM(CAU)C 72 nt11□□□□□ -0.65
YPL039WQ03080 IMT4tM(CAU)E 72 nt11□□□□□ -0.65
YPL039WQ03080 IMT3tM(CAU)J3 72 nt11□□□□□ -0.65
YPL039WQ03080 IMT1tM(CAU)O1 72 nt11□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms