Protein–RNA interactions for Protein: P32912

VAM7, Vacuolar morphogenesis protein 7, yeastyeast

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAM7P32912 NSR1YGR159C 1245 nt17.45■□□□□ 0.38
VAM7P32912 YML009W-BYML009W-B 477 nt17.27■□□□□ 0.36
VAM7P32912 NOP1YDL014W 984 nt16.67■□□□□ 0.26
VAM7P32912 MDJ1YFL016C 1536 nt15.76■□□□□ 0.11
VAM7P32912 YKL036CYKL036C 393 nt15.13■□□□□ 0.01
VAM7P32912 SRX1YKL086W 384 nt14.6□□□□□ -0.07
VAM7P32912 Q0297Q0297 156 nt14.54□□□□□ -0.08
VAM7P32912 YJL027CYJL027C 417 nt14.5□□□□□ -0.09
VAM7P32912 SSA3YBL075C 1950 nt13.87□□□□□ -0.19
VAM7P32912 DBP2YNL112W 1641 nt13.87□□□□□ -0.19
VAM7P32912 YCR051WYCR051W 669 nt13.79□□□□□ -0.2
VAM7P32912 SCS3YGL126W 1143 nt13.62□□□□□ -0.23
VAM7P32912 YBR190WYBR190W 312 nt13.53□□□□□ -0.24
VAM7P32912 TRN1tP(UGG)A 72 nt13.37□□□□□ -0.27
VAM7P32912 SUF9tP(UGG)F 72 nt13.37□□□□□ -0.27
VAM7P32912 SUF8tP(UGG)H 72 nt13.37□□□□□ -0.27
VAM7P32912 tP(UGG)LtP(UGG)L 72 nt13.37□□□□□ -0.27
VAM7P32912 SUF7tP(UGG)M 72 nt13.37□□□□□ -0.27
VAM7P32912 tP(UGG)N1tP(UGG)N1 72 nt13.37□□□□□ -0.27
VAM7P32912 tP(UGG)N2tP(UGG)N2 72 nt13.37□□□□□ -0.27
VAM7P32912 tP(UGG)O1tP(UGG)O1 72 nt13.37□□□□□ -0.27
VAM7P32912 SUF11tP(UGG)O2 72 nt13.37□□□□□ -0.27
VAM7P32912 CCC1YLR220W 969 nt13.21□□□□□ -0.29
VAM7P32912 RTC3YHR087W 336 nt13.17□□□□□ -0.3
VAM7P32912 YOL085CYOL085C 342 nt13.13□□□□□ -0.31
VAM7P32912 RPP1BYDL130W 321 nt13.04□□□□□ -0.32
VAM7P32912 PKP1YIL042C 1185 nt12.95□□□□□ -0.34
VAM7P32912 RVS167YDR388W 1449 nt12.88□□□□□ -0.35
VAM7P32912 SCJ1YMR214W 1134 nt12.82□□□□□ -0.36
VAM7P32912 PUT4YOR348C 1884 nt12.56□□□□□ -0.4
VAM7P32912 tP(UGG)O3tP(UGG)O3 72 nt12.55□□□□□ -0.4
VAM7P32912 PET122YER153C 765 nt12.49□□□□□ -0.41
VAM7P32912 SHR5YOL110W 714 nt12.41□□□□□ -0.42
VAM7P32912 SCR1SCR1 522 nt12.24□□□□□ -0.45
VAM7P32912 URN1YPR152C 1398 nt12.24□□□□□ -0.45
VAM7P32912 ARE1YCR048W 1833 nt12.21□□□□□ -0.46
VAM7P32912 SPT5YML010W 3192 nt12.16□□□□□ -0.46
VAM7P32912 DEP1YAL013W 1218 nt12.15□□□□□ -0.46
VAM7P32912 YDJ1YNL064C 1230 nt12.15□□□□□ -0.46
VAM7P32912 OPI9YLR338W 858 nt12.14□□□□□ -0.47
VAM7P32912 SAH1YER043C 1350 nt12.14□□□□□ -0.47
VAM7P32912 ATS1YAL020C 1002 nt12.11□□□□□ -0.47
VAM7P32912 RRN5YLR141W 1092 nt12.11□□□□□ -0.47
VAM7P32912 POA1YBR022W 534 nt12.09□□□□□ -0.47
VAM7P32912 SSA4YER103W 1929 nt12.03□□□□□ -0.48
VAM7P32912 YHR049C-AYHR049C-A 297 nt12.02□□□□□ -0.49
VAM7P32912 RPN10YHR200W 807 nt11.96□□□□□ -0.49
VAM7P32912 BSC6YOL137W 1494 nt11.94□□□□□ -0.5
VAM7P32912 YNL208WYNL208W 600 nt11.93□□□□□ -0.5
VAM7P32912 GAR1YHR089C 618 nt11.9□□□□□ -0.5
VAM7P32912 YER088W-BYER088W-B 147 nt11.87□□□□□ -0.51
VAM7P32912 PAC11YDR488C 1602 nt11.79□□□□□ -0.52
VAM7P32912 PUN1YLR414C 792 nt11.76□□□□□ -0.53
VAM7P32912 BDF1YLR399C 2061 nt11.73□□□□□ -0.53
VAM7P32912 RSB1YOR049C 1065 nt11.73□□□□□ -0.53
VAM7P32912 BUD23YCR047C 828 nt11.7□□□□□ -0.54
VAM7P32912 PTC2YER089C 1395 nt11.68□□□□□ -0.54
VAM7P32912 YJR018WYJR018W 363 nt11.67□□□□□ -0.54
VAM7P32912 NVJ2YPR091C 2313 nt11.63□□□□□ -0.55
VAM7P32912 NAB2YGL122C 1578 nt11.57□□□□□ -0.56
VAM7P32912 TAT1YBR069C 1860 nt11.55□□□□□ -0.56
VAM7P32912 TIR1YER011W 765 nt11.54□□□□□ -0.56
VAM7P32912 SSA1YAL005C 1929 nt11.47□□□□□ -0.57
VAM7P32912 YJR120WYJR120W 351 nt11.47□□□□□ -0.57
VAM7P32912 FIS1YIL065C 468 nt11.39□□□□□ -0.59
VAM7P32912 FPS1YLL043W 2010 nt11.38□□□□□ -0.59
VAM7P32912 DAL1YIR027C 1383 nt11.36□□□□□ -0.59
VAM7P32912 RPP2BYDR382W 333 nt11.32□□□□□ -0.6
VAM7P32912 MEP2YNL142W 1500 nt11.31□□□□□ -0.6
VAM7P32912 PST2YDR032C 597 nt11.29□□□□□ -0.6
VAM7P32912 INM2YDR287W 879 nt11.29□□□□□ -0.6
VAM7P32912 FPR4YLR449W 1179 nt11.29□□□□□ -0.6
VAM7P32912 PHO4YFR034C 939 nt11.25□□□□□ -0.61
VAM7P32912 SRB2YHR041C 633 nt11.25□□□□□ -0.61
VAM7P32912 YPS1YLR120C 1710 nt11.15□□□□□ -0.62
VAM7P32912 YBL100CYBL100C 315 nt11.13□□□□□ -0.63
VAM7P32912 DCW1YKL046C 1350 nt11.12□□□□□ -0.63
VAM7P32912 BDH2YAL061W 1254 nt11.08□□□□□ -0.64
VAM7P32912 YBR220CYBR220C 1683 nt11.04□□□□□ -0.64
VAM7P32912 YDR095CYDR095C 411 nt11.03□□□□□ -0.64
VAM7P32912 YHR165W-AYHR165W-A 312 nt11.01□□□□□ -0.65
VAM7P32912 FUN26YAL022C 1554 nt10.99□□□□□ -0.65
VAM7P32912 WWM1YFL010C 636 nt10.99□□□□□ -0.65
VAM7P32912 Q0182Q0182 405 nt10.99□□□□□ -0.65
VAM7P32912 EMI2YDR516C 1503 nt10.92□□□□□ -0.66
VAM7P32912 TRM9YML014W 840 nt10.91□□□□□ -0.66
VAM7P32912 SHU1YHL006C 453 nt10.89□□□□□ -0.67
VAM7P32912 LSM3YLR438C-A 270 nt10.89□□□□□ -0.67
VAM7P32912 ALF1YNL148C 765 nt10.86□□□□□ -0.67
VAM7P32912 PTP1YDL230W 1008 nt10.85□□□□□ -0.67
VAM7P32912 YMR090WYMR090W 684 nt10.84□□□□□ -0.67
VAM7P32912 RPP2AYOL039W 321 nt10.83□□□□□ -0.68
VAM7P32912 SDH1YKL148C 1923 nt10.83□□□□□ -0.68
VAM7P32912 CCT6YDR188W 1641 nt10.83□□□□□ -0.68
VAM7P32912 PCH2YBR186W 1695 nt10.82□□□□□ -0.68
VAM7P32912 GUT2YIL155C 1950 nt10.81□□□□□ -0.68
VAM7P32912 YAL037C-BYAL037C-B 975 nt10.81□□□□□ -0.68
VAM7P32912 CAC2YML102W 1407 nt10.81□□□□□ -0.68
VAM7P32912 YFL021C-AYFL021C-A 855 nt10.8□□□□□ -0.68
VAM7P32912 YGR021WYGR021W 873 nt10.8□□□□□ -0.68
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms