Protein–RNA interactions for Protein: P22133

MDH2, Malate dehydrogenase, cytoplasmic, yeastyeast

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MDH2P22133 YML009W-BYML009W-B 477 nt18.25■□□□□ 0.51
MDH2P22133 NSR1YGR159C 1245 nt18.1■□□□□ 0.49
MDH2P22133 NOP1YDL014W 984 nt17.77■□□□□ 0.44
MDH2P22133 YKL036CYKL036C 393 nt16.45■□□□□ 0.22
MDH2P22133 MDJ1YFL016C 1536 nt16.01■□□□□ 0.15
MDH2P22133 Q0297Q0297 156 nt15.59■□□□□ 0.09
MDH2P22133 SRX1YKL086W 384 nt15.54■□□□□ 0.08
MDH2P22133 YJL027CYJL027C 417 nt15.36■□□□□ 0.05
MDH2P22133 SCS3YGL126W 1143 nt15.01□□□□□ -0.01
MDH2P22133 YCR051WYCR051W 669 nt14.72□□□□□ -0.05
MDH2P22133 YOL085CYOL085C 342 nt14.25□□□□□ -0.13
MDH2P22133 DBP2YNL112W 1641 nt14.22□□□□□ -0.13
MDH2P22133 TRN1tP(UGG)A 72 nt14.03□□□□□ -0.16
MDH2P22133 SUF9tP(UGG)F 72 nt14.03□□□□□ -0.16
MDH2P22133 SUF8tP(UGG)H 72 nt14.03□□□□□ -0.16
MDH2P22133 tP(UGG)LtP(UGG)L 72 nt14.03□□□□□ -0.16
MDH2P22133 SUF7tP(UGG)M 72 nt14.03□□□□□ -0.16
MDH2P22133 tP(UGG)N1tP(UGG)N1 72 nt14.03□□□□□ -0.16
MDH2P22133 tP(UGG)N2tP(UGG)N2 72 nt14.03□□□□□ -0.16
MDH2P22133 tP(UGG)O1tP(UGG)O1 72 nt14.03□□□□□ -0.16
MDH2P22133 SUF11tP(UGG)O2 72 nt14.03□□□□□ -0.16
MDH2P22133 PKP1YIL042C 1185 nt14.01□□□□□ -0.17
MDH2P22133 RPP1BYDL130W 321 nt13.98□□□□□ -0.17
MDH2P22133 CCC1YLR220W 969 nt13.85□□□□□ -0.19
MDH2P22133 YBR190WYBR190W 312 nt13.65□□□□□ -0.22
MDH2P22133 ATS1YAL020C 1002 nt13.43□□□□□ -0.26
MDH2P22133 SCJ1YMR214W 1134 nt13.37□□□□□ -0.27
MDH2P22133 PET122YER153C 765 nt13.35□□□□□ -0.27
MDH2P22133 RVS167YDR388W 1449 nt13.35□□□□□ -0.27
MDH2P22133 RTC3YHR087W 336 nt13.32□□□□□ -0.28
MDH2P22133 tP(UGG)O3tP(UGG)O3 72 nt13.28□□□□□ -0.28
MDH2P22133 SCR1SCR1 522 nt13.21□□□□□ -0.29
MDH2P22133 RRN5YLR141W 1092 nt12.97□□□□□ -0.33
MDH2P22133 SHR5YOL110W 714 nt12.91□□□□□ -0.34
MDH2P22133 YDJ1YNL064C 1230 nt12.85□□□□□ -0.35
MDH2P22133 YER088W-BYER088W-B 147 nt12.72□□□□□ -0.37
MDH2P22133 RSB1YOR049C 1065 nt12.71□□□□□ -0.37
MDH2P22133 GAR1YHR089C 618 nt12.53□□□□□ -0.4
MDH2P22133 DEP1YAL013W 1218 nt12.51□□□□□ -0.41
MDH2P22133 URN1YPR152C 1398 nt12.51□□□□□ -0.41
MDH2P22133 PST2YDR032C 597 nt12.44□□□□□ -0.42
MDH2P22133 SSA3YBL075C 1950 nt12.42□□□□□ -0.42
MDH2P22133 PUT4YOR348C 1884 nt12.36□□□□□ -0.43
MDH2P22133 RPN10YHR200W 807 nt12.33□□□□□ -0.44
MDH2P22133 OPI9YLR338W 858 nt12.33□□□□□ -0.44
MDH2P22133 YNL208WYNL208W 600 nt12.33□□□□□ -0.44
MDH2P22133 SAH1YER043C 1350 nt12.22□□□□□ -0.45
MDH2P22133 ARE1YCR048W 1833 nt12.16□□□□□ -0.46
MDH2P22133 TIR1YER011W 765 nt12.12□□□□□ -0.47
MDH2P22133 YHR049C-AYHR049C-A 297 nt11.98□□□□□ -0.49
MDH2P22133 SSA1YAL005C 1929 nt11.98□□□□□ -0.49
MDH2P22133 PUN1YLR414C 792 nt11.97□□□□□ -0.49
MDH2P22133 YKL097CYKL097C 411 nt11.96□□□□□ -0.49
MDH2P22133 POA1YBR022W 534 nt11.96□□□□□ -0.49
MDH2P22133 YJR018WYJR018W 363 nt11.94□□□□□ -0.5
MDH2P22133 SHU1YHL006C 453 nt11.92□□□□□ -0.5
MDH2P22133 PTC2YER089C 1395 nt11.8□□□□□ -0.52
MDH2P22133 SRB2YHR041C 633 nt11.79□□□□□ -0.52
MDH2P22133 YJR120WYJR120W 351 nt11.79□□□□□ -0.52
MDH2P22133 BUD23YCR047C 828 nt11.7□□□□□ -0.54
MDH2P22133 RPP2BYDR382W 333 nt11.7□□□□□ -0.54
MDH2P22133 YAL037C-BYAL037C-B 975 nt11.7□□□□□ -0.54
MDH2P22133 BSC6YOL137W 1494 nt11.69□□□□□ -0.54
MDH2P22133 NAB2YGL122C 1578 nt11.65□□□□□ -0.54
MDH2P22133 WWM1YFL010C 636 nt11.6□□□□□ -0.55
MDH2P22133 YGR021WYGR021W 873 nt11.55□□□□□ -0.56
MDH2P22133 HOM6YJR139C 1080 nt11.52□□□□□ -0.57
MDH2P22133 INM2YDR287W 879 nt11.51□□□□□ -0.57
MDH2P22133 FIS1YIL065C 468 nt11.51□□□□□ -0.57
MDH2P22133 DAL1YIR027C 1383 nt11.51□□□□□ -0.57
MDH2P22133 BDH2YAL061W 1254 nt11.5□□□□□ -0.57
MDH2P22133 YOR139CYOR139C 393 nt11.49□□□□□ -0.57
MDH2P22133 MNP1YGL068W 585 nt11.46□□□□□ -0.57
MDH2P22133 FPR4YLR449W 1179 nt11.45□□□□□ -0.58
MDH2P22133 YFL021C-AYFL021C-A 855 nt11.41□□□□□ -0.58
MDH2P22133 YBL100CYBL100C 315 nt11.41□□□□□ -0.58
MDH2P22133 PHO4YFR034C 939 nt11.4□□□□□ -0.58
MDH2P22133 LSM3YLR438C-A 270 nt11.37□□□□□ -0.59
MDH2P22133 NPL3YDR432W 1245 nt11.36□□□□□ -0.59
MDH2P22133 RKM5YLR137W 1104 nt11.35□□□□□ -0.59
MDH2P22133 YOL037CYOL037C 354 nt11.3□□□□□ -0.6
MDH2P22133 SPT5YML010W 3192 nt11.29□□□□□ -0.6
MDH2P22133 FUN26YAL022C 1554 nt11.28□□□□□ -0.6
MDH2P22133 TRM9YML014W 840 nt11.25□□□□□ -0.61
MDH2P22133 SSA4YER103W 1929 nt11.17□□□□□ -0.62
MDH2P22133 YPS1YLR120C 1710 nt11.17□□□□□ -0.62
MDH2P22133 CCT6YDR188W 1641 nt11.17□□□□□ -0.62
MDH2P22133 YDR095CYDR095C 411 nt11.1□□□□□ -0.63
MDH2P22133 ALF1YNL148C 765 nt11.08□□□□□ -0.64
MDH2P22133 tM(CAU)CtM(CAU)C 72 nt11.04□□□□□ -0.64
MDH2P22133 IMT4tM(CAU)E 72 nt11.04□□□□□ -0.64
MDH2P22133 IMT3tM(CAU)J3 72 nt11.04□□□□□ -0.64
MDH2P22133 IMT1tM(CAU)O1 72 nt11.04□□□□□ -0.64
MDH2P22133 IMT2tM(CAU)P 72 nt11.04□□□□□ -0.64
MDH2P22133 SUF2tP(AGG)C 72 nt11.04□□□□□ -0.64
MDH2P22133 SUF10tP(AGG)N 72 nt11.04□□□□□ -0.64
MDH2P22133 YLR281CYLR281C 468 nt11.04□□□□□ -0.64
MDH2P22133 YHR165W-AYHR165W-A 312 nt11.01□□□□□ -0.65
MDH2P22133 WHI5YOR083W 888 nt10.99□□□□□ -0.65
MDH2P22133 MEP2YNL142W 1500 nt10.97□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms