Protein–RNA interactions for Protein: P48415

SEC16, COPII coat assembly protein SEC16, yeastyeast

Known RBP Predictions only

Length 2,195 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC16P48415 YML009W-BYML009W-B 477 nt18.12■□□□□ 0.49
SEC16P48415 NSR1YGR159C 1245 nt17.7■□□□□ 0.42
SEC16P48415 NOP1YDL014W 984 nt17.17■□□□□ 0.34
SEC16P48415 YKL036CYKL036C 393 nt16.21■□□□□ 0.19
SEC16P48415 MDJ1YFL016C 1536 nt15.87■□□□□ 0.13
SEC16P48415 SRX1YKL086W 384 nt15.58■□□□□ 0.08
SEC16P48415 Q0297Q0297 156 nt15.37■□□□□ 0.05
SEC16P48415 YJL027CYJL027C 417 nt15.14■□□□□ 0.01
SEC16P48415 SCS3YGL126W 1143 nt15.04■□□□□ -0
SEC16P48415 YCR051WYCR051W 669 nt14.52□□□□□ -0.08
SEC16P48415 DBP2YNL112W 1641 nt14.23□□□□□ -0.13
SEC16P48415 TRN1tP(UGG)A 72 nt14.03□□□□□ -0.16
SEC16P48415 SUF9tP(UGG)F 72 nt14.03□□□□□ -0.16
SEC16P48415 SUF8tP(UGG)H 72 nt14.03□□□□□ -0.16
SEC16P48415 tP(UGG)LtP(UGG)L 72 nt14.03□□□□□ -0.16
SEC16P48415 SUF7tP(UGG)M 72 nt14.03□□□□□ -0.16
SEC16P48415 tP(UGG)N1tP(UGG)N1 72 nt14.03□□□□□ -0.16
SEC16P48415 tP(UGG)N2tP(UGG)N2 72 nt14.03□□□□□ -0.16
SEC16P48415 tP(UGG)O1tP(UGG)O1 72 nt14.03□□□□□ -0.16
SEC16P48415 SUF11tP(UGG)O2 72 nt14.03□□□□□ -0.16
SEC16P48415 YOL085CYOL085C 342 nt13.95□□□□□ -0.18
SEC16P48415 SCJ1YMR214W 1134 nt13.93□□□□□ -0.18
SEC16P48415 PKP1YIL042C 1185 nt13.91□□□□□ -0.18
SEC16P48415 CCC1YLR220W 969 nt13.68□□□□□ -0.22
SEC16P48415 RPP1BYDL130W 321 nt13.62□□□□□ -0.23
SEC16P48415 ATS1YAL020C 1002 nt13.57□□□□□ -0.24
SEC16P48415 YBR190WYBR190W 312 nt13.34□□□□□ -0.27
SEC16P48415 RVS167YDR388W 1449 nt13.19□□□□□ -0.3
SEC16P48415 PET122YER153C 765 nt13.16□□□□□ -0.3
SEC16P48415 tP(UGG)O3tP(UGG)O3 72 nt13.12□□□□□ -0.31
SEC16P48415 SCR1SCR1 522 nt12.98□□□□□ -0.33
SEC16P48415 RTC3YHR087W 336 nt12.96□□□□□ -0.34
SEC16P48415 RRN5YLR141W 1092 nt12.91□□□□□ -0.34
SEC16P48415 SHR5YOL110W 714 nt12.72□□□□□ -0.37
SEC16P48415 YER088W-BYER088W-B 147 nt12.62□□□□□ -0.39
SEC16P48415 RSB1YOR049C 1065 nt12.62□□□□□ -0.39
SEC16P48415 YDJ1YNL064C 1230 nt12.55□□□□□ -0.4
SEC16P48415 DEP1YAL013W 1218 nt12.47□□□□□ -0.41
SEC16P48415 GAR1YHR089C 618 nt12.47□□□□□ -0.41
SEC16P48415 PST2YDR032C 597 nt12.45□□□□□ -0.42
SEC16P48415 URN1YPR152C 1398 nt12.39□□□□□ -0.43
SEC16P48415 YKL097CYKL097C 411 nt12.33□□□□□ -0.44
SEC16P48415 ARE1YCR048W 1833 nt12.3□□□□□ -0.44
SEC16P48415 PUT4YOR348C 1884 nt12.29□□□□□ -0.44
SEC16P48415 OPI9YLR338W 858 nt12.18□□□□□ -0.46
SEC16P48415 SAH1YER043C 1350 nt12.17□□□□□ -0.46
SEC16P48415 YNL208WYNL208W 600 nt12.02□□□□□ -0.49
SEC16P48415 YHR049C-AYHR049C-A 297 nt12□□□□□ -0.49
SEC16P48415 SSA1YAL005C 1929 nt11.95□□□□□ -0.5
SEC16P48415 RPN10YHR200W 807 nt11.91□□□□□ -0.5
SEC16P48415 SRB2YHR041C 633 nt11.89□□□□□ -0.51
SEC16P48415 YOR139CYOR139C 393 nt11.87□□□□□ -0.51
SEC16P48415 POA1YBR022W 534 nt11.87□□□□□ -0.51
SEC16P48415 TIR1YER011W 765 nt11.86□□□□□ -0.51
SEC16P48415 YJR120WYJR120W 351 nt11.82□□□□□ -0.52
SEC16P48415 YJR018WYJR018W 363 nt11.81□□□□□ -0.52
SEC16P48415 PUN1YLR414C 792 nt11.79□□□□□ -0.52
SEC16P48415 SHU1YHL006C 453 nt11.78□□□□□ -0.52
SEC16P48415 YAL037C-BYAL037C-B 975 nt11.74□□□□□ -0.53
SEC16P48415 PTC2YER089C 1395 nt11.7□□□□□ -0.54
SEC16P48415 BUD23YCR047C 828 nt11.68□□□□□ -0.54
SEC16P48415 BSC6YOL137W 1494 nt11.66□□□□□ -0.54
SEC16P48415 SSA3YBL075C 1950 nt11.65□□□□□ -0.54
SEC16P48415 WWM1YFL010C 636 nt11.62□□□□□ -0.55
SEC16P48415 NAB2YGL122C 1578 nt11.49□□□□□ -0.57
SEC16P48415 NPL3YDR432W 1245 nt11.47□□□□□ -0.57
SEC16P48415 FIS1YIL065C 468 nt11.47□□□□□ -0.57
SEC16P48415 HOM6YJR139C 1080 nt11.43□□□□□ -0.58
SEC16P48415 RPP2BYDR382W 333 nt11.42□□□□□ -0.58
SEC16P48415 MNP1YGL068W 585 nt11.41□□□□□ -0.58
SEC16P48415 YGR021WYGR021W 873 nt11.34□□□□□ -0.59
SEC16P48415 BDH2YAL061W 1254 nt11.33□□□□□ -0.6
SEC16P48415 YFL021C-AYFL021C-A 855 nt11.3□□□□□ -0.6
SEC16P48415 PHO4YFR034C 939 nt11.3□□□□□ -0.6
SEC16P48415 SPT5YML010W 3192 nt11.29□□□□□ -0.6
SEC16P48415 DAL1YIR027C 1383 nt11.24□□□□□ -0.61
SEC16P48415 YBL100CYBL100C 315 nt11.2□□□□□ -0.62
SEC16P48415 tM(CAU)CtM(CAU)C 72 nt11.19□□□□□ -0.62
SEC16P48415 IMT4tM(CAU)E 72 nt11.19□□□□□ -0.62
SEC16P48415 IMT3tM(CAU)J3 72 nt11.19□□□□□ -0.62
SEC16P48415 IMT1tM(CAU)O1 72 nt11.19□□□□□ -0.62
SEC16P48415 IMT2tM(CAU)P 72 nt11.19□□□□□ -0.62
SEC16P48415 FPR4YLR449W 1179 nt11.19□□□□□ -0.62
SEC16P48415 INM2YDR287W 879 nt11.18□□□□□ -0.62
SEC16P48415 TRM9YML014W 840 nt11.17□□□□□ -0.62
SEC16P48415 YPS1YLR120C 1710 nt11.12□□□□□ -0.63
SEC16P48415 YOL037CYOL037C 354 nt11.12□□□□□ -0.63
SEC16P48415 LSM3YLR438C-A 270 nt11.07□□□□□ -0.64
SEC16P48415 YDR095CYDR095C 411 nt11.04□□□□□ -0.64
SEC16P48415 RKM5YLR137W 1104 nt11.03□□□□□ -0.64
SEC16P48415 CCT6YDR188W 1641 nt10.97□□□□□ -0.65
SEC16P48415 FUN26YAL022C 1554 nt10.97□□□□□ -0.65
SEC16P48415 MOT3YMR070W 1473 nt10.97□□□□□ -0.65
SEC16P48415 WHI5YOR083W 888 nt10.94□□□□□ -0.66
SEC16P48415 YPR011CYPR011C 981 nt10.92□□□□□ -0.66
SEC16P48415 PUS2YGL063W 1113 nt10.91□□□□□ -0.66
SEC16P48415 YLR281CYLR281C 468 nt10.88□□□□□ -0.67
SEC16P48415 ALF1YNL148C 765 nt10.87□□□□□ -0.67
SEC16P48415 SUF2tP(AGG)C 72 nt10.86□□□□□ -0.67
SEC16P48415 SUF10tP(AGG)N 72 nt10.86□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 9.6 ms