Protein–RNA interactions for Protein: P52491

UBC12, NEDD8-conjugating enzyme UBC12, yeastyeast

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBC12P52491 NSR1YGR159C 1245 nt16.59■□□□□ 0.25
UBC12P52491 YML009W-BYML009W-B 477 nt16.02■□□□□ 0.16
UBC12P52491 MDJ1YFL016C 1536 nt15.54■□□□□ 0.08
UBC12P52491 NOP1YDL014W 984 nt15.21■□□□□ 0.03
UBC12P52491 YJL027CYJL027C 417 nt14.26□□□□□ -0.13
UBC12P52491 SSA3YBL075C 1950 nt14.06□□□□□ -0.16
UBC12P52491 YBR190WYBR190W 312 nt13.45□□□□□ -0.26
UBC12P52491 DBP2YNL112W 1641 nt13.38□□□□□ -0.27
UBC12P52491 YKL036CYKL036C 393 nt13.26□□□□□ -0.29
UBC12P52491 SRX1YKL086W 384 nt13.26□□□□□ -0.29
UBC12P52491 RTC3YHR087W 336 nt13.15□□□□□ -0.3
UBC12P52491 Q0297Q0297 156 nt13.01□□□□□ -0.33
UBC12P52491 PUT4YOR348C 1884 nt12.85□□□□□ -0.35
UBC12P52491 YCR051WYCR051W 669 nt12.56□□□□□ -0.4
UBC12P52491 TRN1tP(UGG)A 72 nt12.49□□□□□ -0.41
UBC12P52491 SUF9tP(UGG)F 72 nt12.49□□□□□ -0.41
UBC12P52491 SUF8tP(UGG)H 72 nt12.49□□□□□ -0.41
UBC12P52491 tP(UGG)LtP(UGG)L 72 nt12.49□□□□□ -0.41
UBC12P52491 SUF7tP(UGG)M 72 nt12.49□□□□□ -0.41
UBC12P52491 tP(UGG)N1tP(UGG)N1 72 nt12.49□□□□□ -0.41
UBC12P52491 tP(UGG)N2tP(UGG)N2 72 nt12.49□□□□□ -0.41
UBC12P52491 tP(UGG)O1tP(UGG)O1 72 nt12.49□□□□□ -0.41
UBC12P52491 SUF11tP(UGG)O2 72 nt12.49□□□□□ -0.41
UBC12P52491 RVS167YDR388W 1449 nt12.45□□□□□ -0.42
UBC12P52491 CCC1YLR220W 969 nt12.39□□□□□ -0.43
UBC12P52491 POA1YBR022W 534 nt12.39□□□□□ -0.43
UBC12P52491 ARE1YCR048W 1833 nt12.36□□□□□ -0.43
UBC12P52491 SSA4YER103W 1929 nt12.31□□□□□ -0.44
UBC12P52491 BSC6YOL137W 1494 nt12.28□□□□□ -0.44
UBC12P52491 SPT5YML010W 3192 nt12.27□□□□□ -0.44
UBC12P52491 YHR049C-AYHR049C-A 297 nt12.24□□□□□ -0.45
UBC12P52491 SCJ1YMR214W 1134 nt12.17□□□□□ -0.46
UBC12P52491 SAH1YER043C 1350 nt12.11□□□□□ -0.47
UBC12P52491 URN1YPR152C 1398 nt11.99□□□□□ -0.49
UBC12P52491 OPI9YLR338W 858 nt11.96□□□□□ -0.49
UBC12P52491 BUD23YCR047C 828 nt11.91□□□□□ -0.5
UBC12P52491 BDF1YLR399C 2061 nt11.9□□□□□ -0.51
UBC12P52491 SHR5YOL110W 714 nt11.79□□□□□ -0.52
UBC12P52491 PAC11YDR488C 1602 nt11.75□□□□□ -0.53
UBC12P52491 DEP1YAL013W 1218 nt11.75□□□□□ -0.53
UBC12P52491 TAT1YBR069C 1860 nt11.72□□□□□ -0.53
UBC12P52491 RPP1BYDL130W 321 nt11.68□□□□□ -0.54
UBC12P52491 SCS3YGL126W 1143 nt11.63□□□□□ -0.55
UBC12P52491 RPN10YHR200W 807 nt11.63□□□□□ -0.55
UBC12P52491 PTC2YER089C 1395 nt11.63□□□□□ -0.55
UBC12P52491 PUN1YLR414C 792 nt11.62□□□□□ -0.55
UBC12P52491 MEP2YNL142W 1500 nt11.61□□□□□ -0.55
UBC12P52491 NAB2YGL122C 1578 nt11.58□□□□□ -0.55
UBC12P52491 YOL085CYOL085C 342 nt11.57□□□□□ -0.56
UBC12P52491 tP(UGG)O3tP(UGG)O3 72 nt11.55□□□□□ -0.56
UBC12P52491 YNL208WYNL208W 600 nt11.46□□□□□ -0.57
UBC12P52491 PKP1YIL042C 1185 nt11.45□□□□□ -0.58
UBC12P52491 DCW1YKL046C 1350 nt11.41□□□□□ -0.58
UBC12P52491 NVJ2YPR091C 2313 nt11.38□□□□□ -0.59
UBC12P52491 YJR018WYJR018W 363 nt11.38□□□□□ -0.59
UBC12P52491 FIS1YIL065C 468 nt11.33□□□□□ -0.6
UBC12P52491 YBR220CYBR220C 1683 nt11.3□□□□□ -0.6
UBC12P52491 PET122YER153C 765 nt11.28□□□□□ -0.6
UBC12P52491 DAL1YIR027C 1383 nt11.28□□□□□ -0.6
UBC12P52491 FPR4YLR449W 1179 nt11.27□□□□□ -0.61
UBC12P52491 YMR090WYMR090W 684 nt11.26□□□□□ -0.61
UBC12P52491 YPS1YLR120C 1710 nt11.24□□□□□ -0.61
UBC12P52491 EMI2YDR516C 1503 nt11.24□□□□□ -0.61
UBC12P52491 YHR165W-AYHR165W-A 312 nt11.2□□□□□ -0.62
UBC12P52491 PHO4YFR034C 939 nt11.17□□□□□ -0.62
UBC12P52491 YDJ1YNL064C 1230 nt11.16□□□□□ -0.62
UBC12P52491 PCH2YBR186W 1695 nt11.11□□□□□ -0.63
UBC12P52491 SDH1YKL148C 1923 nt11.11□□□□□ -0.63
UBC12P52491 GAR1YHR089C 618 nt11.08□□□□□ -0.64
UBC12P52491 GUT2YIL155C 1950 nt11.07□□□□□ -0.64
UBC12P52491 YDL221WYDL221W 552 nt11.07□□□□□ -0.64
UBC12P52491 INM2YDR287W 879 nt11.06□□□□□ -0.64
UBC12P52491 SEC11YIR022W 504 nt11.04□□□□□ -0.64
UBC12P52491 YDR095CYDR095C 411 nt11.03□□□□□ -0.64
UBC12P52491 YJR120WYJR120W 351 nt10.98□□□□□ -0.65
UBC12P52491 SCR1SCR1 522 nt10.95□□□□□ -0.66
UBC12P52491 RPP2BYDR382W 333 nt10.94□□□□□ -0.66
UBC12P52491 CAC2YML102W 1407 nt10.93□□□□□ -0.66
UBC12P52491 SCC4YER147C 1875 nt10.91□□□□□ -0.66
UBC12P52491 RRN5YLR141W 1092 nt10.86□□□□□ -0.67
UBC12P52491 PTP1YDL230W 1008 nt10.85□□□□□ -0.67
UBC12P52491 YBL100CYBL100C 315 nt10.85□□□□□ -0.67
UBC12P52491 RPP2AYOL039W 321 nt10.84□□□□□ -0.67
UBC12P52491 PIB2YGL023C 1908 nt10.84□□□□□ -0.67
UBC12P52491 YSC84YHR016C 1407 nt10.78□□□□□ -0.68
UBC12P52491 FPS1YLL043W 2010 nt10.77□□□□□ -0.68
UBC12P52491 RTF1YGL244W 1677 nt10.76□□□□□ -0.69
UBC12P52491 SSA1YAL005C 1929 nt10.76□□□□□ -0.69
UBC12P52491 IRC15YPL017C 1500 nt10.76□□□□□ -0.69
UBC12P52491 TIR1YER011W 765 nt10.74□□□□□ -0.69
UBC12P52491 ALF1YNL148C 765 nt10.73□□□□□ -0.69
UBC12P52491 GIS3YLR094C 1509 nt10.73□□□□□ -0.69
UBC12P52491 FUN26YAL022C 1554 nt10.68□□□□□ -0.7
UBC12P52491 YHL050CYHL050C 2094 nt10.66□□□□□ -0.7
UBC12P52491 YER088W-BYER088W-B 147 nt10.63□□□□□ -0.71
UBC12P52491 BOP3YNL042W 1191 nt10.63□□□□□ -0.71
UBC12P52491 BOR1YNL275W 1731 nt10.61□□□□□ -0.71
UBC12P52491 PTK1YKL198C 1989 nt10.58□□□□□ -0.72
UBC12P52491 BDH2YAL061W 1254 nt10.56□□□□□ -0.72
UBC12P52491 UME6YDR207C 2511 nt10.56□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms