Protein–RNA interactions for Protein: P16451

PDX1, Pyruvate dehydrogenase complex protein X component, mitochondrial, yeastyeast

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDX1P16451 YML009W-BYML009W-B 477 nt18.32■□□□□ 0.52
PDX1P16451 NSR1YGR159C 1245 nt18.2■□□□□ 0.5
PDX1P16451 NOP1YDL014W 984 nt17.92■□□□□ 0.46
PDX1P16451 YKL036CYKL036C 393 nt16.53■□□□□ 0.24
PDX1P16451 MDJ1YFL016C 1536 nt16.02■□□□□ 0.15
PDX1P16451 Q0297Q0297 156 nt15.66■□□□□ 0.1
PDX1P16451 SRX1YKL086W 384 nt15.61■□□□□ 0.09
PDX1P16451 YJL027CYJL027C 417 nt15.43■□□□□ 0.06
PDX1P16451 SCS3YGL126W 1143 nt15.02■□□□□ -0
PDX1P16451 YCR051WYCR051W 669 nt14.79□□□□□ -0.04
PDX1P16451 YOL085CYOL085C 342 nt14.27□□□□□ -0.13
PDX1P16451 DBP2YNL112W 1641 nt14.18□□□□□ -0.14
PDX1P16451 TRN1tP(UGG)A 72 nt14.06□□□□□ -0.16
PDX1P16451 SUF9tP(UGG)F 72 nt14.06□□□□□ -0.16
PDX1P16451 SUF8tP(UGG)H 72 nt14.06□□□□□ -0.16
PDX1P16451 tP(UGG)LtP(UGG)L 72 nt14.06□□□□□ -0.16
PDX1P16451 SUF7tP(UGG)M 72 nt14.06□□□□□ -0.16
PDX1P16451 tP(UGG)N1tP(UGG)N1 72 nt14.06□□□□□ -0.16
PDX1P16451 tP(UGG)N2tP(UGG)N2 72 nt14.06□□□□□ -0.16
PDX1P16451 tP(UGG)O1tP(UGG)O1 72 nt14.06□□□□□ -0.16
PDX1P16451 SUF11tP(UGG)O2 72 nt14.06□□□□□ -0.16
PDX1P16451 RPP1BYDL130W 321 nt14.05□□□□□ -0.16
PDX1P16451 PKP1YIL042C 1185 nt14□□□□□ -0.17
PDX1P16451 CCC1YLR220W 969 nt13.88□□□□□ -0.19
PDX1P16451 YBR190WYBR190W 312 nt13.73□□□□□ -0.21
PDX1P16451 RVS167YDR388W 1449 nt13.48□□□□□ -0.25
PDX1P16451 SCJ1YMR214W 1134 nt13.48□□□□□ -0.25
PDX1P16451 ATS1YAL020C 1002 nt13.46□□□□□ -0.25
PDX1P16451 RTC3YHR087W 336 nt13.41□□□□□ -0.26
PDX1P16451 PET122YER153C 765 nt13.36□□□□□ -0.27
PDX1P16451 SCR1SCR1 522 nt13.33□□□□□ -0.28
PDX1P16451 tP(UGG)O3tP(UGG)O3 72 nt13.31□□□□□ -0.28
PDX1P16451 SSA3YBL075C 1950 nt13.18□□□□□ -0.3
PDX1P16451 Q0182Q0182 405 nt13.08□□□□□ -0.32
PDX1P16451 SHR5YOL110W 714 nt12.99□□□□□ -0.33
PDX1P16451 RRN5YLR141W 1092 nt12.98□□□□□ -0.33
PDX1P16451 YDJ1YNL064C 1230 nt12.92□□□□□ -0.34
PDX1P16451 RSB1YOR049C 1065 nt12.76□□□□□ -0.37
PDX1P16451 YER088W-BYER088W-B 147 nt12.73□□□□□ -0.37
PDX1P16451 GAR1YHR089C 618 nt12.56□□□□□ -0.4
PDX1P16451 URN1YPR152C 1398 nt12.56□□□□□ -0.4
PDX1P16451 DEP1YAL013W 1218 nt12.51□□□□□ -0.41
PDX1P16451 RPN10YHR200W 807 nt12.49□□□□□ -0.41
PDX1P16451 PST2YDR032C 597 nt12.45□□□□□ -0.42
PDX1P16451 YNL208WYNL208W 600 nt12.42□□□□□ -0.42
PDX1P16451 OPI9YLR338W 858 nt12.39□□□□□ -0.43
PDX1P16451 PUT4YOR348C 1884 nt12.36□□□□□ -0.43
PDX1P16451 MOT3YMR070W 1473 nt12.34□□□□□ -0.43
PDX1P16451 SAH1YER043C 1350 nt12.24□□□□□ -0.45
PDX1P16451 TIR1YER011W 765 nt12.17□□□□□ -0.46
PDX1P16451 ARE1YCR048W 1833 nt12.14□□□□□ -0.47
PDX1P16451 PUN1YLR414C 792 nt12.06□□□□□ -0.48
PDX1P16451 YKL097CYKL097C 411 nt12.02□□□□□ -0.49
PDX1P16451 YHR049C-AYHR049C-A 297 nt12.01□□□□□ -0.49
PDX1P16451 YJR018WYJR018W 363 nt12□□□□□ -0.49
PDX1P16451 POA1YBR022W 534 nt11.96□□□□□ -0.49
PDX1P16451 SSA1YAL005C 1929 nt11.96□□□□□ -0.5
PDX1P16451 SHU1YHL006C 453 nt11.9□□□□□ -0.5
PDX1P16451 PTC2YER089C 1395 nt11.83□□□□□ -0.52
PDX1P16451 RPP2BYDR382W 333 nt11.83□□□□□ -0.52
PDX1P16451 BUD23YCR047C 828 nt11.74□□□□□ -0.53
PDX1P16451 YJR120WYJR120W 351 nt11.74□□□□□ -0.53
PDX1P16451 NAB2YGL122C 1578 nt11.72□□□□□ -0.53
PDX1P16451 BSC6YOL137W 1494 nt11.7□□□□□ -0.54
PDX1P16451 SRB2YHR041C 633 nt11.67□□□□□ -0.54
PDX1P16451 YAL037C-BYAL037C-B 975 nt11.67□□□□□ -0.54
PDX1P16451 YGR021WYGR021W 873 nt11.66□□□□□ -0.54
PDX1P16451 INM2YDR287W 879 nt11.61□□□□□ -0.55
PDX1P16451 WWM1YFL010C 636 nt11.6□□□□□ -0.55
PDX1P16451 DAL1YIR027C 1383 nt11.57□□□□□ -0.56
PDX1P16451 BDH2YAL061W 1254 nt11.56□□□□□ -0.56
PDX1P16451 HOM6YJR139C 1080 nt11.54□□□□□ -0.56
PDX1P16451 FIS1YIL065C 468 nt11.51□□□□□ -0.57
PDX1P16451 FPR4YLR449W 1179 nt11.51□□□□□ -0.57
PDX1P16451 YFL021C-AYFL021C-A 855 nt11.49□□□□□ -0.57
PDX1P16451 YBL100CYBL100C 315 nt11.47□□□□□ -0.57
PDX1P16451 LSM3YLR438C-A 270 nt11.46□□□□□ -0.57
PDX1P16451 YOR139CYOR139C 393 nt11.45□□□□□ -0.58
PDX1P16451 NPL3YDR432W 1245 nt11.44□□□□□ -0.58
PDX1P16451 PHO4YFR034C 939 nt11.44□□□□□ -0.58
PDX1P16451 MNP1YGL068W 585 nt11.44□□□□□ -0.58
PDX1P16451 YOL037CYOL037C 354 nt11.39□□□□□ -0.59
PDX1P16451 RKM5YLR137W 1104 nt11.38□□□□□ -0.59
PDX1P16451 TRM9YML014W 840 nt11.35□□□□□ -0.59
PDX1P16451 FUN26YAL022C 1554 nt11.32□□□□□ -0.6
PDX1P16451 SSA4YER103W 1929 nt11.23□□□□□ -0.61
PDX1P16451 CCT6YDR188W 1641 nt11.22□□□□□ -0.61
PDX1P16451 SPT5YML010W 3192 nt11.2□□□□□ -0.62
PDX1P16451 YPS1YLR120C 1710 nt11.19□□□□□ -0.62
PDX1P16451 ALF1YNL148C 765 nt11.19□□□□□ -0.62
PDX1P16451 SUF2tP(AGG)C 72 nt11.17□□□□□ -0.62
PDX1P16451 SUF10tP(AGG)N 72 nt11.17□□□□□ -0.62
PDX1P16451 PAC11YDR488C 1602 nt11.15□□□□□ -0.62
PDX1P16451 YDR095CYDR095C 411 nt11.14□□□□□ -0.63
PDX1P16451 YHR165W-AYHR165W-A 312 nt11.08□□□□□ -0.64
PDX1P16451 FPS1YLL043W 2010 nt11.07□□□□□ -0.64
PDX1P16451 YLR281CYLR281C 468 nt11.06□□□□□ -0.64
PDX1P16451 NVJ2YPR091C 2313 nt11.03□□□□□ -0.64
PDX1P16451 tM(CAU)CtM(CAU)C 72 nt11.03□□□□□ -0.64
PDX1P16451 IMT4tM(CAU)E 72 nt11.03□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 6.5 ms