Protein–RNA interactions for Protein: P31412

VMA5, V-type proton ATPase subunit C, yeastyeast

Known RBP Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA5P31412 NSR1YGR159C 1245 nt17.49■□□□□ 0.39
VMA5P31412 YML009W-BYML009W-B 477 nt17.28■□□□□ 0.36
VMA5P31412 NOP1YDL014W 984 nt16.69■□□□□ 0.26
VMA5P31412 MDJ1YFL016C 1536 nt15.81■□□□□ 0.12
VMA5P31412 YKL036CYKL036C 393 nt15.09■□□□□ 0.01
VMA5P31412 SRX1YKL086W 384 nt14.59□□□□□ -0.07
VMA5P31412 YJL027CYJL027C 417 nt14.57□□□□□ -0.08
VMA5P31412 Q0297Q0297 156 nt14.52□□□□□ -0.09
VMA5P31412 DBP2YNL112W 1641 nt13.88□□□□□ -0.19
VMA5P31412 YCR051WYCR051W 669 nt13.79□□□□□ -0.2
VMA5P31412 SSA3YBL075C 1950 nt13.76□□□□□ -0.21
VMA5P31412 YBR190WYBR190W 312 nt13.59□□□□□ -0.23
VMA5P31412 SCS3YGL126W 1143 nt13.56□□□□□ -0.24
VMA5P31412 TRN1tP(UGG)A 72 nt13.38□□□□□ -0.27
VMA5P31412 SUF9tP(UGG)F 72 nt13.38□□□□□ -0.27
VMA5P31412 SUF8tP(UGG)H 72 nt13.38□□□□□ -0.27
VMA5P31412 tP(UGG)LtP(UGG)L 72 nt13.38□□□□□ -0.27
VMA5P31412 SUF7tP(UGG)M 72 nt13.38□□□□□ -0.27
VMA5P31412 tP(UGG)N1tP(UGG)N1 72 nt13.38□□□□□ -0.27
VMA5P31412 tP(UGG)N2tP(UGG)N2 72 nt13.38□□□□□ -0.27
VMA5P31412 tP(UGG)O1tP(UGG)O1 72 nt13.38□□□□□ -0.27
VMA5P31412 SUF11tP(UGG)O2 72 nt13.38□□□□□ -0.27
VMA5P31412 RTC3YHR087W 336 nt13.25□□□□□ -0.29
VMA5P31412 CCC1YLR220W 969 nt13.22□□□□□ -0.29
VMA5P31412 YOL085CYOL085C 342 nt13.08□□□□□ -0.32
VMA5P31412 RPP1BYDL130W 321 nt13.01□□□□□ -0.33
VMA5P31412 RVS167YDR388W 1449 nt12.96□□□□□ -0.34
VMA5P31412 PKP1YIL042C 1185 nt12.9□□□□□ -0.34
VMA5P31412 SCJ1YMR214W 1134 nt12.83□□□□□ -0.36
VMA5P31412 PUT4YOR348C 1884 nt12.59□□□□□ -0.39
VMA5P31412 tP(UGG)O3tP(UGG)O3 72 nt12.55□□□□□ -0.4
VMA5P31412 PET122YER153C 765 nt12.47□□□□□ -0.41
VMA5P31412 SHR5YOL110W 714 nt12.44□□□□□ -0.42
VMA5P31412 URN1YPR152C 1398 nt12.29□□□□□ -0.44
VMA5P31412 ARE1YCR048W 1833 nt12.25□□□□□ -0.45
VMA5P31412 SCR1SCR1 522 nt12.24□□□□□ -0.45
VMA5P31412 OPI9YLR338W 858 nt12.19□□□□□ -0.46
VMA5P31412 SAH1YER043C 1350 nt12.18□□□□□ -0.46
VMA5P31412 DEP1YAL013W 1218 nt12.18□□□□□ -0.46
VMA5P31412 YDJ1YNL064C 1230 nt12.15□□□□□ -0.46
VMA5P31412 POA1YBR022W 534 nt12.15□□□□□ -0.46
VMA5P31412 YHR049C-AYHR049C-A 297 nt12.09□□□□□ -0.47
VMA5P31412 RRN5YLR141W 1092 nt12.08□□□□□ -0.48
VMA5P31412 RPN10YHR200W 807 nt12.04□□□□□ -0.48
VMA5P31412 ATS1YAL020C 1002 nt12.04□□□□□ -0.48
VMA5P31412 YNL208WYNL208W 600 nt11.97□□□□□ -0.49
VMA5P31412 BSC6YOL137W 1494 nt11.96□□□□□ -0.49
VMA5P31412 GAR1YHR089C 618 nt11.91□□□□□ -0.5
VMA5P31412 SSA4YER103W 1929 nt11.89□□□□□ -0.51
VMA5P31412 YER088W-BYER088W-B 147 nt11.83□□□□□ -0.52
VMA5P31412 PUN1YLR414C 792 nt11.83□□□□□ -0.52
VMA5P31412 BUD23YCR047C 828 nt11.78□□□□□ -0.52
VMA5P31412 SPT5YML010W 3192 nt11.77□□□□□ -0.53
VMA5P31412 PTC2YER089C 1395 nt11.73□□□□□ -0.53
VMA5P31412 YJR018WYJR018W 363 nt11.71□□□□□ -0.53
VMA5P31412 RSB1YOR049C 1065 nt11.71□□□□□ -0.53
VMA5P31412 NAB2YGL122C 1578 nt11.63□□□□□ -0.55
VMA5P31412 PAC11YDR488C 1602 nt11.6□□□□□ -0.55
VMA5P31412 TIR1YER011W 765 nt11.54□□□□□ -0.56
VMA5P31412 BDF1YLR399C 2061 nt11.51□□□□□ -0.57
VMA5P31412 YJR120WYJR120W 351 nt11.47□□□□□ -0.57
VMA5P31412 SSA1YAL005C 1929 nt11.47□□□□□ -0.57
VMA5P31412 FIS1YIL065C 468 nt11.44□□□□□ -0.58
VMA5P31412 DAL1YIR027C 1383 nt11.41□□□□□ -0.58
VMA5P31412 NVJ2YPR091C 2313 nt11.4□□□□□ -0.59
VMA5P31412 RPP2BYDR382W 333 nt11.38□□□□□ -0.59
VMA5P31412 TAT1YBR069C 1860 nt11.36□□□□□ -0.59
VMA5P31412 FPR4YLR449W 1179 nt11.36□□□□□ -0.59
VMA5P31412 INM2YDR287W 879 nt11.34□□□□□ -0.59
VMA5P31412 PHO4YFR034C 939 nt11.31□□□□□ -0.6
VMA5P31412 MEP2YNL142W 1500 nt11.27□□□□□ -0.61
VMA5P31412 PST2YDR032C 597 nt11.22□□□□□ -0.61
VMA5P31412 SRB2YHR041C 633 nt11.21□□□□□ -0.61
VMA5P31412 YPS1YLR120C 1710 nt11.21□□□□□ -0.62
VMA5P31412 YBL100CYBL100C 315 nt11.17□□□□□ -0.62
VMA5P31412 BDH2YAL061W 1254 nt11.11□□□□□ -0.63
VMA5P31412 YDR095CYDR095C 411 nt11.09□□□□□ -0.63
VMA5P31412 YHR165W-AYHR165W-A 312 nt11.09□□□□□ -0.63
VMA5P31412 Q0182Q0182 405 nt11.08□□□□□ -0.64
VMA5P31412 DCW1YKL046C 1350 nt11.07□□□□□ -0.64
VMA5P31412 FUN26YAL022C 1554 nt11.03□□□□□ -0.64
VMA5P31412 WWM1YFL010C 636 nt10.97□□□□□ -0.65
VMA5P31412 FPS1YLL043W 2010 nt10.96□□□□□ -0.65
VMA5P31412 TRM9YML014W 840 nt10.95□□□□□ -0.66
VMA5P31412 EMI2YDR516C 1503 nt10.94□□□□□ -0.66
VMA5P31412 ALF1YNL148C 765 nt10.93□□□□□ -0.66
VMA5P31412 LSM3YLR438C-A 270 nt10.91□□□□□ -0.66
VMA5P31412 PTP1YDL230W 1008 nt10.88□□□□□ -0.67
VMA5P31412 YMR090WYMR090W 684 nt10.88□□□□□ -0.67
VMA5P31412 RPP2AYOL039W 321 nt10.88□□□□□ -0.67
VMA5P31412 CCT6YDR188W 1641 nt10.86□□□□□ -0.67
VMA5P31412 YBR220CYBR220C 1683 nt10.84□□□□□ -0.67
VMA5P31412 CAC2YML102W 1407 nt10.84□□□□□ -0.67
VMA5P31412 YDL221WYDL221W 552 nt10.82□□□□□ -0.68
VMA5P31412 SHU1YHL006C 453 nt10.82□□□□□ -0.68
VMA5P31412 YFL021C-AYFL021C-A 855 nt10.81□□□□□ -0.68
VMA5P31412 YGR021WYGR021W 873 nt10.81□□□□□ -0.68
VMA5P31412 SUF2tP(AGG)C 72 nt10.79□□□□□ -0.68
VMA5P31412 SUF10tP(AGG)N 72 nt10.79□□□□□ -0.68
VMA5P31412 SIS1YNL007C 1059 nt10.79□□□□□ -0.68
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms