RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	MPP6	P53725	186 aa	Predicted RBP	5.83	□□□□□ -1.48
VMA3	YEL027W	BUD17	P53727	317 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	MNT4	P53745	580 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	ENA2	Q01896	1091 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	SPC19	Q03954	165 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	SNX41	Q04053	625 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	HDA2	Q06629	674 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	YLR040C	Q07988	224 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	COQ10	Q08058	207 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	RDR1	Q08904	546 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	YPL191C	Q08930	360 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	YGK3	Q12222	375 aa	Predicted RBP	5.83	□□□□□ -1.48
VMA3	YEL027W	HER1	Q12276	1246 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	SET6	Q12529	373 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	ENA5	Q12691	1091 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	VCX1	Q99385	411 aa		5.83	□□□□□ -1.48
VMA3	YEL027W	YHR214C-D	P0CX93	97 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	PET122	P10355	254 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	PHO80	P20052	293 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	AIM17	P23180	465 aa	Known RBP	5.82	□□□□□ -1.48
VMA3	YEL027W	BUD23	P25627	275 aa	Predicted RBP	5.82	□□□□□ -1.48
VMA3	YEL027W	RPP1	P38786	293 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	GDI1	P39958	451 aa	Known RBP	5.82	□□□□□ -1.48
VMA3	YEL027W	IES5	P40060	125 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	PGU1	P47180	361 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	HSV2	P50079	448 aa	Predicted RBP	5.82	□□□□□ -1.48
VMA3	YEL027W	SAM37	P50110	327 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	GIS1	Q03833	894 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	FIN1	Q03898	291 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	PLP1	Q04004	230 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	TSR2	Q06672	205 aa	Known RBP	5.82	□□□□□ -1.48
VMA3	YEL027W	YRA1	Q12159	226 aa	Known RBP	5.82	□□□□□ -1.48
VMA3	YEL027W	WTM2	Q12206	467 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	RLM1	Q12224	676 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	COX17	Q12287	69 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	PCL9	Q12477	304 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	MTR10	Q99189	972 aa		5.82	□□□□□ -1.48
VMA3	YEL027W	PBS2	P08018	668 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	SSA3	P09435	649 aa	Known RBP	5.81	□□□□□ -1.48
VMA3	YEL027W	YFR010W-A	P0C5N0	62 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	PRE2	P30656	287 aa	Known RBP	5.81	□□□□□ -1.48
VMA3	YEL027W	NDC1	P32500	655 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	YEF1	P32622	495 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	SUR1	P33300	382 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	BAP2	P38084	609 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	YHR035W	P38769	630 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	FET3	P38993	636 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	AIM10	P39965	576 aa	Known RBP	5.81	□□□□□ -1.48
VMA3	YEL027W	YER010C	P40011	234 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	SSY5	P47002	699 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	OGG1	P53397	376 aa	Predicted RBP	5.81	□□□□□ -1.48
VMA3	YEL027W	PGA1	P53896	198 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	NUP49	Q02199	472 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	YMR087W	Q04299	284 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	MIX14	Q04341	121 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	MRPL1	Q04599	285 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	COX20	Q04935	205 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	FMP42	Q04991	504 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	YLR346C	Q06139	101 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	NEJ1	Q06148	342 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	EMG1	Q06287	252 aa	Known RBP	5.81	□□□□□ -1.48
VMA3	YEL027W	IRC19	Q07843	230 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	GSH2	Q08220	491 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	BTS1	Q12051	335 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	BAG7	Q12128	409 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	SWM1	Q12379	170 aa		5.81	□□□□□ -1.48
VMA3	YEL027W	PEP4	P07267	405 aa	Known RBP	5.8	□□□□□ -1.48
VMA3	YEL027W	MET2	P08465	486 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	SCO1	P23833	295 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	DDI1	P40087	428 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	REE1	P40893	198 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	IRC5	P43610	853 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	IRC7	P43623	340 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	RRN9	P53437	365 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	YPL039W	Q03080	316 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	SRL4	Q03085	281 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	SCS7	Q03529	384 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	GPI17	Q04080	534 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	YMR315W	Q04869	349 aa	Known RBP	5.8	□□□□□ -1.48
VMA3	YEL027W	RDL2	Q08742	149 aa	Known RBP	5.8	□□□□□ -1.48
VMA3	YEL027W	YOR343C	Q12484	108 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	YGR161W-C	Q3E744	92 aa		5.8	□□□□□ -1.48
VMA3	YEL027W	SEC12	P11655	471 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
VMA3	YEL027W	RPB8	P20436	146 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	ATG15	P25641	520 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	ERG9	P29704	444 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	ATS1	P31386	333 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	5.79	□□□□□ -1.48	not detected
VMA3	YEL027W	MRPL16	P38064	232 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	APD1	P38281	316 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	VBA2	P38358	474 aa	Known RBP	5.79	□□□□□ -1.48
VMA3	YEL027W	MLH1	P38920	769 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	YER184C	P39961	794 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	SHO1	P40073	367 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	HIS6	P40545	261 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	MNN5	P46982	586 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	CIK1	Q01649	594 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	SDC1	Q03323	175 aa		5.79	□□□□□ -1.48
VMA3	YEL027W	MGR3	Q04472	501 aa		5.79	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 111.9 ms