Protein–RNA interactions for Protein: P50079

HSV2, SVP1-like protein 2, yeastyeast

Predicted RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HSV2P50079 YML009W-BYML009W-B 477 nt18.14■□□□□ 0.49
HSV2P50079 NSR1YGR159C 1245 nt17.92■□□□□ 0.46
HSV2P50079 NOP1YDL014W 984 nt17.74■□□□□ 0.43
HSV2P50079 YKL036CYKL036C 393 nt16.72■□□□□ 0.27
HSV2P50079 MDJ1YFL016C 1536 nt15.89■□□□□ 0.13
HSV2P50079 YJL027CYJL027C 417 nt15.66■□□□□ 0.1
HSV2P50079 Q0297Q0297 156 nt15.63■□□□□ 0.09
HSV2P50079 SRX1YKL086W 384 nt15.52■□□□□ 0.08
HSV2P50079 SCS3YGL126W 1143 nt15.39■□□□□ 0.05
HSV2P50079 YCR051WYCR051W 669 nt14.69□□□□□ -0.06
HSV2P50079 YOL085CYOL085C 342 nt14.44□□□□□ -0.1
HSV2P50079 SCJ1YMR214W 1134 nt14.3□□□□□ -0.12
HSV2P50079 Q0182Q0182 405 nt14.27□□□□□ -0.13
HSV2P50079 PKP1YIL042C 1185 nt14.1□□□□□ -0.15
HSV2P50079 RPP1BYDL130W 321 nt14.01□□□□□ -0.17
HSV2P50079 DBP2YNL112W 1641 nt14.01□□□□□ -0.17
HSV2P50079 TRN1tP(UGG)A 72 nt13.92□□□□□ -0.18
HSV2P50079 SUF9tP(UGG)F 72 nt13.92□□□□□ -0.18
HSV2P50079 SUF8tP(UGG)H 72 nt13.92□□□□□ -0.18
HSV2P50079 tP(UGG)LtP(UGG)L 72 nt13.92□□□□□ -0.18
HSV2P50079 SUF7tP(UGG)M 72 nt13.92□□□□□ -0.18
HSV2P50079 tP(UGG)N1tP(UGG)N1 72 nt13.92□□□□□ -0.18
HSV2P50079 tP(UGG)N2tP(UGG)N2 72 nt13.92□□□□□ -0.18
HSV2P50079 tP(UGG)O1tP(UGG)O1 72 nt13.92□□□□□ -0.18
HSV2P50079 SUF11tP(UGG)O2 72 nt13.92□□□□□ -0.18
HSV2P50079 ATS1YAL020C 1002 nt13.91□□□□□ -0.18
HSV2P50079 MOT3YMR070W 1473 nt13.8□□□□□ -0.2
HSV2P50079 CCC1YLR220W 969 nt13.72□□□□□ -0.21
HSV2P50079 YBR190WYBR190W 312 nt13.67□□□□□ -0.22
HSV2P50079 PET122YER153C 765 nt13.34□□□□□ -0.27
HSV2P50079 SCR1SCR1 522 nt13.33□□□□□ -0.28
HSV2P50079 RTC3YHR087W 336 nt13.32□□□□□ -0.28
HSV2P50079 tP(UGG)O3tP(UGG)O3 72 nt13.23□□□□□ -0.29
HSV2P50079 RVS167YDR388W 1449 nt13.22□□□□□ -0.29
HSV2P50079 RRN5YLR141W 1092 nt12.98□□□□□ -0.33
HSV2P50079 YDJ1YNL064C 1230 nt12.82□□□□□ -0.36
HSV2P50079 RSB1YOR049C 1065 nt12.82□□□□□ -0.36
HSV2P50079 PST2YDR032C 597 nt12.81□□□□□ -0.36
HSV2P50079 SHR5YOL110W 714 nt12.78□□□□□ -0.36
HSV2P50079 YER088W-BYER088W-B 147 nt12.74□□□□□ -0.37
HSV2P50079 SSA3YBL075C 1950 nt12.63□□□□□ -0.39
HSV2P50079 YKL097CYKL097C 411 nt12.54□□□□□ -0.4
HSV2P50079 PUT4YOR348C 1884 nt12.48□□□□□ -0.41
HSV2P50079 GAR1YHR089C 618 nt12.45□□□□□ -0.42
HSV2P50079 URN1YPR152C 1398 nt12.4□□□□□ -0.42
HSV2P50079 DEP1YAL013W 1218 nt12.3□□□□□ -0.44
HSV2P50079 OPI9YLR338W 858 nt12.29□□□□□ -0.44
HSV2P50079 RPN10YHR200W 807 nt12.27□□□□□ -0.45
HSV2P50079 ARE1YCR048W 1833 nt12.2□□□□□ -0.46
HSV2P50079 SAH1YER043C 1350 nt12.19□□□□□ -0.46
HSV2P50079 YNL208WYNL208W 600 nt12.18□□□□□ -0.46
HSV2P50079 SHU1YHL006C 453 nt12.15□□□□□ -0.46
HSV2P50079 YHR049C-AYHR049C-A 297 nt12.06□□□□□ -0.48
HSV2P50079 POA1YBR022W 534 nt12.06□□□□□ -0.48
HSV2P50079 TIR1YER011W 765 nt12.05□□□□□ -0.48
HSV2P50079 PUN1YLR414C 792 nt11.97□□□□□ -0.49
HSV2P50079 YOR139CYOR139C 393 nt11.92□□□□□ -0.5
HSV2P50079 SSA1YAL005C 1929 nt11.87□□□□□ -0.51
HSV2P50079 BSC6YOL137W 1494 nt11.85□□□□□ -0.51
HSV2P50079 YJR018WYJR018W 363 nt11.84□□□□□ -0.51
HSV2P50079 PTC2YER089C 1395 nt11.79□□□□□ -0.52
HSV2P50079 NPL3YDR432W 1245 nt11.77□□□□□ -0.53
HSV2P50079 YAL037C-BYAL037C-B 975 nt11.77□□□□□ -0.53
HSV2P50079 BUD23YCR047C 828 nt11.76□□□□□ -0.53
HSV2P50079 SRB2YHR041C 633 nt11.71□□□□□ -0.53
HSV2P50079 NAB2YGL122C 1578 nt11.69□□□□□ -0.54
HSV2P50079 YJR120WYJR120W 351 nt11.64□□□□□ -0.55
HSV2P50079 RPP2BYDR382W 333 nt11.61□□□□□ -0.55
HSV2P50079 YGR021WYGR021W 873 nt11.55□□□□□ -0.56
HSV2P50079 WWM1YFL010C 636 nt11.53□□□□□ -0.56
HSV2P50079 HOM6YJR139C 1080 nt11.52□□□□□ -0.57
HSV2P50079 YOL037CYOL037C 354 nt11.52□□□□□ -0.57
HSV2P50079 DAL1YIR027C 1383 nt11.5□□□□□ -0.57
HSV2P50079 INM2YDR287W 879 nt11.48□□□□□ -0.57
HSV2P50079 FIS1YIL065C 468 nt11.47□□□□□ -0.57
HSV2P50079 MNP1YGL068W 585 nt11.45□□□□□ -0.58
HSV2P50079 tM(CAU)CtM(CAU)C 72 nt11.44□□□□□ -0.58
HSV2P50079 IMT4tM(CAU)E 72 nt11.44□□□□□ -0.58
HSV2P50079 IMT3tM(CAU)J3 72 nt11.44□□□□□ -0.58
HSV2P50079 IMT1tM(CAU)O1 72 nt11.44□□□□□ -0.58
HSV2P50079 IMT2tM(CAU)P 72 nt11.44□□□□□ -0.58
HSV2P50079 FPR4YLR449W 1179 nt11.42□□□□□ -0.58
HSV2P50079 SPT5YML010W 3192 nt11.38□□□□□ -0.59
HSV2P50079 YFL021C-AYFL021C-A 855 nt11.37□□□□□ -0.59
HSV2P50079 PHO4YFR034C 939 nt11.37□□□□□ -0.59
HSV2P50079 BDH2YAL061W 1254 nt11.37□□□□□ -0.59
HSV2P50079 RKM5YLR137W 1104 nt11.35□□□□□ -0.59
HSV2P50079 YBL100CYBL100C 315 nt11.31□□□□□ -0.6
HSV2P50079 LSM3YLR438C-A 270 nt11.29□□□□□ -0.6
HSV2P50079 YPS1YLR120C 1710 nt11.21□□□□□ -0.61
HSV2P50079 PUS2YGL063W 1113 nt11.19□□□□□ -0.62
HSV2P50079 YLR281CYLR281C 468 nt11.18□□□□□ -0.62
HSV2P50079 MEP2YNL142W 1500 nt11.16□□□□□ -0.62
HSV2P50079 FUN26YAL022C 1554 nt11.16□□□□□ -0.62
HSV2P50079 YDR095CYDR095C 411 nt11.13□□□□□ -0.63
HSV2P50079 TRM9YML014W 840 nt11.13□□□□□ -0.63
HSV2P50079 YHR165W-AYHR165W-A 312 nt11.1□□□□□ -0.63
HSV2P50079 NME1NME1 340 nt11.08□□□□□ -0.64
HSV2P50079 ALF1YNL148C 765 nt11.07□□□□□ -0.64
HSV2P50079 SSA4YER103W 1929 nt11.06□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms