Protein–RNA interactions for Protein: Q06287

EMG1, Ribosomal RNA small subunit methyltransferase NEP1, yeastyeast

Known RBP Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
EMG1Q06287 NSR1YGR159C 1245 nt18.4■□□□□ 0.54
EMG1Q06287 YML009W-BYML009W-B 477 nt18.19■□□□□ 0.5
EMG1Q06287 NOP1YDL014W 984 nt17.83■□□□□ 0.44
EMG1Q06287 MDJ1YFL016C 1536 nt16.96■□□□□ 0.31
EMG1Q06287 YKL036CYKL036C 393 nt16.46■□□□□ 0.23
EMG1Q06287 Q0297Q0297 156 nt15.53■□□□□ 0.08
EMG1Q06287 YJL027CYJL027C 417 nt15.51■□□□□ 0.07
EMG1Q06287 SRX1YKL086W 384 nt15.48■□□□□ 0.07
EMG1Q06287 SCS3YGL126W 1143 nt14.94□□□□□ -0.02
EMG1Q06287 DBP2YNL112W 1641 nt14.81□□□□□ -0.04
EMG1Q06287 YCR051WYCR051W 669 nt14.71□□□□□ -0.05
EMG1Q06287 YBR190WYBR190W 312 nt14.52□□□□□ -0.09
EMG1Q06287 YOL085CYOL085C 342 nt14.18□□□□□ -0.14
EMG1Q06287 RTC3YHR087W 336 nt14.17□□□□□ -0.14
EMG1Q06287 SSA3YBL075C 1950 nt14.15□□□□□ -0.14
EMG1Q06287 TRN1tP(UGG)A 72 nt14.05□□□□□ -0.16
EMG1Q06287 SUF9tP(UGG)F 72 nt14.05□□□□□ -0.16
EMG1Q06287 SUF8tP(UGG)H 72 nt14.05□□□□□ -0.16
EMG1Q06287 tP(UGG)LtP(UGG)L 72 nt14.05□□□□□ -0.16
EMG1Q06287 SUF7tP(UGG)M 72 nt14.05□□□□□ -0.16
EMG1Q06287 tP(UGG)N1tP(UGG)N1 72 nt14.05□□□□□ -0.16
EMG1Q06287 tP(UGG)N2tP(UGG)N2 72 nt14.05□□□□□ -0.16
EMG1Q06287 tP(UGG)O1tP(UGG)O1 72 nt14.05□□□□□ -0.16
EMG1Q06287 SUF11tP(UGG)O2 72 nt14.05□□□□□ -0.16
EMG1Q06287 RPP1BYDL130W 321 nt13.94□□□□□ -0.18
EMG1Q06287 PKP1YIL042C 1185 nt13.91□□□□□ -0.18
EMG1Q06287 CCC1YLR220W 969 nt13.91□□□□□ -0.18
EMG1Q06287 Q0182Q0182 405 nt13.9□□□□□ -0.18
EMG1Q06287 MOT3YMR070W 1473 nt13.75□□□□□ -0.21
EMG1Q06287 PUT4YOR348C 1884 nt13.69□□□□□ -0.22
EMG1Q06287 RVS167YDR388W 1449 nt13.64□□□□□ -0.23
EMG1Q06287 SCJ1YMR214W 1134 nt13.62□□□□□ -0.23
EMG1Q06287 ATS1YAL020C 1002 nt13.41□□□□□ -0.26
EMG1Q06287 SCR1SCR1 522 nt13.3□□□□□ -0.28
EMG1Q06287 ARE1YCR048W 1833 nt13.28□□□□□ -0.28
EMG1Q06287 PET122YER153C 765 nt13.23□□□□□ -0.29
EMG1Q06287 POA1YBR022W 534 nt13.2□□□□□ -0.3
EMG1Q06287 tP(UGG)O3tP(UGG)O3 72 nt13.19□□□□□ -0.3
EMG1Q06287 SAH1YER043C 1350 nt13.1□□□□□ -0.31
EMG1Q06287 URN1YPR152C 1398 nt13.09□□□□□ -0.31
EMG1Q06287 SHR5YOL110W 714 nt13.09□□□□□ -0.31
EMG1Q06287 YHR049C-AYHR049C-A 297 nt13.08□□□□□ -0.32
EMG1Q06287 BSC6YOL137W 1494 nt13.02□□□□□ -0.33
EMG1Q06287 OPI9YLR338W 858 nt13□□□□□ -0.33
EMG1Q06287 DEP1YAL013W 1218 nt12.97□□□□□ -0.33
EMG1Q06287 SPT5YML010W 3192 nt12.9□□□□□ -0.34
EMG1Q06287 RRN5YLR141W 1092 nt12.89□□□□□ -0.35
EMG1Q06287 YDJ1YNL064C 1230 nt12.81□□□□□ -0.36
EMG1Q06287 BUD23YCR047C 828 nt12.71□□□□□ -0.37
EMG1Q06287 RSB1YOR049C 1065 nt12.71□□□□□ -0.37
EMG1Q06287 RPN10YHR200W 807 nt12.67□□□□□ -0.38
EMG1Q06287 SSA4YER103W 1929 nt12.65□□□□□ -0.38
EMG1Q06287 YER088W-BYER088W-B 147 nt12.63□□□□□ -0.39
EMG1Q06287 YNL208WYNL208W 600 nt12.63□□□□□ -0.39
EMG1Q06287 PTC2YER089C 1395 nt12.57□□□□□ -0.4
EMG1Q06287 PUN1YLR414C 792 nt12.57□□□□□ -0.4
EMG1Q06287 GAR1YHR089C 618 nt12.5□□□□□ -0.41
EMG1Q06287 NAB2YGL122C 1578 nt12.45□□□□□ -0.42
EMG1Q06287 YJR018WYJR018W 363 nt12.44□□□□□ -0.42
EMG1Q06287 PST2YDR032C 597 nt12.38□□□□□ -0.43
EMG1Q06287 FIS1YIL065C 468 nt12.3□□□□□ -0.44
EMG1Q06287 BDF1YLR399C 2061 nt12.26□□□□□ -0.45
EMG1Q06287 MEP2YNL142W 1500 nt12.26□□□□□ -0.45
EMG1Q06287 YJR120WYJR120W 351 nt12.25□□□□□ -0.45
EMG1Q06287 YGR139WYGR139W 339 nt12.21□□□□□ -0.45
EMG1Q06287 DAL1YIR027C 1383 nt12.19□□□□□ -0.46
EMG1Q06287 NME1NME1 340 nt12.19□□□□□ -0.46
EMG1Q06287 FPR4YLR449W 1179 nt12.16□□□□□ -0.46
EMG1Q06287 DCW1YKL046C 1350 nt12.12□□□□□ -0.47
EMG1Q06287 SSA1YAL005C 1929 nt12.11□□□□□ -0.47
EMG1Q06287 PHO4YFR034C 939 nt12.1□□□□□ -0.47
EMG1Q06287 TIR1YER011W 765 nt12.09□□□□□ -0.47
EMG1Q06287 YPS1YLR120C 1710 nt12.08□□□□□ -0.48
EMG1Q06287 TAT1YBR069C 1860 nt12.06□□□□□ -0.48
EMG1Q06287 YKL097CYKL097C 411 nt12.03□□□□□ -0.48
EMG1Q06287 INM2YDR287W 879 nt12.01□□□□□ -0.49
EMG1Q06287 RPP2BYDR382W 333 nt11.97□□□□□ -0.49
EMG1Q06287 YHR165W-AYHR165W-A 312 nt11.94□□□□□ -0.5
EMG1Q06287 SRB2YHR041C 633 nt11.91□□□□□ -0.5
EMG1Q06287 YDR095CYDR095C 411 nt11.9□□□□□ -0.5
EMG1Q06287 EMI2YDR516C 1503 nt11.89□□□□□ -0.51
EMG1Q06287 YBR220CYBR220C 1683 nt11.87□□□□□ -0.51
EMG1Q06287 YBL100CYBL100C 315 nt11.86□□□□□ -0.51
EMG1Q06287 SHU1YHL006C 453 nt11.82□□□□□ -0.52
EMG1Q06287 CAC2YML102W 1407 nt11.77□□□□□ -0.52
EMG1Q06287 YDL221WYDL221W 552 nt11.75□□□□□ -0.53
EMG1Q06287 PTP1YDL230W 1008 nt11.75□□□□□ -0.53
EMG1Q06287 YMR090WYMR090W 684 nt11.75□□□□□ -0.53
EMG1Q06287 SDH1YKL148C 1923 nt11.72□□□□□ -0.53
EMG1Q06287 FUN26YAL022C 1554 nt11.71□□□□□ -0.53
EMG1Q06287 BDH2YAL061W 1254 nt11.69□□□□□ -0.54
EMG1Q06287 RPP2AYOL039W 321 nt11.66□□□□□ -0.54
EMG1Q06287 PAC11YDR488C 1602 nt11.62□□□□□ -0.55
EMG1Q06287 ALF1YNL148C 765 nt11.6□□□□□ -0.55
EMG1Q06287 YGR021WYGR021W 873 nt11.59□□□□□ -0.55
EMG1Q06287 IRC15YPL017C 1500 nt11.59□□□□□ -0.55
EMG1Q06287 YAL037C-BYAL037C-B 975 nt11.58□□□□□ -0.56
EMG1Q06287 SCC4YER147C 1875 nt11.56□□□□□ -0.56
EMG1Q06287 TRM9YML014W 840 nt11.54□□□□□ -0.56
EMG1Q06287 PCH2YBR186W 1695 nt11.53□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms