RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C BRE2P43132 505 aa7.5□□□□□ -1.21
RPB7YDR404C PKC1P24583 1151 aa7.49□□□□□ -1.21
RPB7YDR404C BRL1P38770 471 aa7.49□□□□□ -1.21
RPB7YDR404C HST3P53687 447 aa7.49□□□□□ -1.21
RPB7YDR404C IXR1P33417 597 aa7.48□□□□□ -1.21
RPB7YDR404C MET32Q12041 191 aa7.46□□□□□ -1.22
RPB7YDR404C ASH1P34233 588 aa7.45□□□□□ -1.22
RPB7YDR404C MDS3P53094 1487 aa7.44□□□□□ -1.22
RPB7YDR404C AFT1P22149 690 aa7.44□□□□□ -1.22
RPB7YDR404C SGS1P35187 1447 aa7.44□□□□□ -1.22
RPB7YDR404C BUD4P47136 1447 aa7.43□□□□□ -1.22
RPB7YDR404C THO2P53552 1597 aaKnown RBP7.42□□□□□ -1.22
RPB7YDR404C VAC17P25591 423 aa7.42□□□□□ -1.22
RPB7YDR404C BIM1P40013 344 aa7.4□□□□□ -1.22
RPB7YDR404C YJL007CP47080 104 aa7.4□□□□□ -1.22
RPB7YDR404C REV3P14284 1504 aa7.39□□□□□ -1.23
RPB7YDR404C MAK16P10962 306 aaPredicted RBP7.39□□□□□ -1.23
RPB7YDR404C UGA3P26370 528 aa7.39□□□□□ -1.23
RPB7YDR404C HIR3P47171 1648 aa7.38□□□□□ -1.23
RPB7YDR404C TEC1P18412 486 aa7.38□□□□□ -1.23
RPB7YDR404C YBL036CP38197 257 aa7.38□□□□□ -1.23
RPB7YDR404C CSE4P36012 229 aa7.37□□□□□ -1.23
RPB7YDR404C ATG32P40458 529 aa7.37□□□□□ -1.23
RPB7YDR404C MSB3P48566 633 aaPredicted RBP7.37□□□□□ -1.23
RPB7YDR404C FIG4P42837 879 aa7.36□□□□□ -1.23
RPB7YDR404C SRF1Q12516 437 aa7.36□□□□□ -1.23
RPB7YDR404C MRT4P33201 236 aaKnown RBP7.35□□□□□ -1.23
RPB7YDR404C YJR115WP47152 169 aa7.34□□□□□ -1.23
RPB7YDR404C GBP2P25555 427 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
RPB7YDR404C RTT106P40161 455 aa7.33□□□□□ -1.24
RPB7YDR404C NAF1P53919 492 aaKnown RBP7.33□□□□□ -1.24
RPB7YDR404C APP1P53933 587 aa7.33□□□□□ -1.24
RPB7YDR404C ITT1Q04638 464 aa7.32□□□□□ -1.24
RPB7YDR404C SUB2Q07478 446 aaKnown RBP7.32□□□□□ -1.24
RPB7YDR404C PEP1P32319 1579 aa7.32□□□□□ -1.24
RPB7YDR404C SPT5P27692 1063 aaKnown RBP7.31□□□□□ -1.24
RPB7YDR404C GAR1P28007 205 aaKnown RBP7.31□□□□□ -1.24
RPB7YDR404C GUT2P32191 649 aa7.31□□□□□ -1.24
RPB7YDR404C RPL34BP40525 121 aaKnown RBP7.3□□□□□ -1.24
RPB7YDR404C TIF1P10081 395 aaKnown RBP7.29□□□□□ -1.24
RPB7YDR404C PTK2P47116 818 aaKnown RBP7.29□□□□□ -1.24
RPB7YDR404C STE20Q03497 939 aaKnown RBP7.29□□□□□ -1.24
RPB7YDR404C SSA1P10591 642 aaKnown RBP7.28□□□□□ -1.24
RPB7YDR404C MET22P32179 357 aa7.28□□□□□ -1.24
RPB7YDR404C BIO2P32451 375 aa7.28□□□□□ -1.24
RPB7YDR404C EMW1P42842 904 aaKnown RBP7.28□□□□□ -1.24
RPB7YDR404C MKS1P34072 584 aa7.27□□□□□ -1.25
RPB7YDR404C YDR444WQ04093 687 aa7.27□□□□□ -1.25
RPB7YDR404C ENV9Q08651 330 aa7.27□□□□□ -1.25
RPB7YDR404C BPT1P14772 1559 aa7.27□□□□□ -1.25
RPB7YDR404C GEF1P37020 779 aa7.26□□□□□ -1.25
RPB7YDR404C YBL086CP38177 466 aa7.26□□□□□ -1.25
RPB7YDR404C YPR084WQ06821 456 aa7.26□□□□□ -1.25
RPB7YDR404C ARG82P07250 355 aa7.24□□□□□ -1.25
RPB7YDR404C SSA4P22202 642 aaKnown RBP7.24□□□□□ -1.25
RPB7YDR404C YLR346CQ06139 101 aa7.24□□□□□ -1.25
RPB7YDR404C FRA1Q07825 749 aa7.24□□□□□ -1.25
RPB7YDR404C YPR204WQ08995 1032 aa7.24□□□□□ -1.25
RPB7YDR404C MCM16Q12262 181 aa7.24□□□□□ -1.25
RPB7YDR404C YDJ1P25491 409 aaKnown RBP7.23□□□□□ -1.25
RPB7YDR404C EMP47P43555 445 aa7.23□□□□□ -1.25
RPB7YDR404C YNL108CP53929 270 aa7.23□□□□□ -1.25
RPB7YDR404C LCB5Q06147 687 aaKnown RBP7.23□□□□□ -1.25
RPB7YDR404C RTG2P32608 588 aaKnown RBP7.22□□□□□ -1.25
RPB7YDR404C YPP1P46951 817 aa7.22□□□□□ -1.25
RPB7YDR404C MRX12P47084 519 aa7.22□□□□□ -1.25
RPB7YDR404C YML020WQ03722 664 aa7.22□□□□□ -1.25
RPB7YDR404C ATG2P53855 1592 aa7.21□□□□□ -1.25
RPB7YDR404C CPS1P27614 576 aa7.21□□□□□ -1.26
RPB7YDR404C ISF1P32488 338 aa7.21□□□□□ -1.26
RPB7YDR404C TTI1P36097 1038 aa7.21□□□□□ -1.26
RPB7YDR404C DFG5Q05031 458 aa7.21□□□□□ -1.26
RPB7YDR404C ATG20Q07528 640 aa7.21□□□□□ -1.26
RPB7YDR404C BDS1Q08347 646 aa7.21□□□□□ -1.26
RPB7YDR404C FBP26P32604 452 aa7.2□□□□□ -1.26
RPB7YDR404C AAD14P42884 376 aa7.2□□□□□ -1.26
RPB7YDR404C NUP85P46673 744 aa7.2□□□□□ -1.26
RPB7YDR404C SUP45P12385 437 aaKnown RBP7.19□□□□□ -1.26
RPB7YDR404C SLX8P40072 274 aa7.19□□□□□ -1.26
RPB7YDR404C RPP2BP02400 110 aaKnown RBP7.18□□□□□ -1.26
RPB7YDR404C ATG3P40344 310 aa7.18□□□□□ -1.26
RPB7YDR404C LSC2P53312 427 aa7.18□□□□□ -1.26
RPB7YDR404C XRN1P22147 1528 aaKnown RBP7.17□□□□□ -1.26
RPB7YDR404C OPT2Q06593 877 aa7.17□□□□□ -1.26
RPB7YDR404C MIP1P15801 1254 aa7.16□□□□□ -1.26
RPB7YDR404C NOP8Q08287 484 aaPredicted RBP7.16□□□□□ -1.26
RPB7YDR404C ENO2P00925 437 aaKnown RBP7.15□□□□□ -1.26
RPB7YDR404C DLD1P32891 587 aa7.15□□□□□ -1.26
RPB7YDR404C ISU1Q03020 165 aa7.15□□□□□ -1.26
RPB7YDR404C ISR1Q06098 443 aaKnown RBP7.15□□□□□ -1.26
RPB7YDR404C DLD3P39976 496 aaKnown RBP7.14□□□□□ -1.27
RPB7YDR404C SCW11P53189 542 aa7.14□□□□□ -1.27
RPB7YDR404C NOB1Q08444 459 aaKnown RBP7.14□□□□□ -1.27
RPB7YDR404C ENO1P00924 437 aaKnown RBP7.13□□□□□ -1.27
RPB7YDR404C STE6P12866 1290 aa7.13□□□□□ -1.27
RPB7YDR404C UBP2Q01476 1272 aa7.13□□□□□ -1.27
RPB7YDR404C YCF1P39109 1515 aaKnown RBP7.12□□□□□ -1.27
RPB7YDR404C GLY1P37303 387 aaKnown RBP7.12□□□□□ -1.27
RPB7YDR404C YPL062WQ02781 134 aa7.12□□□□□ -1.27
RPB7YDR404C YJR098CP47139 656 aa7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms