RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W NUP42P49686 430 aaKnown RBP8.37□□□□□ -1.07
PRE7YBL041W TRM732Q03496 1420 aa8.37□□□□□ -1.07
PRE7YBL041W FRK1Q03002 865 aaPredicted RBP8.35□□□□□ -1.07
PRE7YBL041W SPP41P38904 1435 aa8.34□□□□□ -1.07
PRE7YBL041W PAC1P39946 494 aaKnown RBP8.33□□□□□ -1.08
PRE7YBL041W BDP1P46678 594 aa8.33□□□□□ -1.08
PRE7YBL041W CLB5P30283 435 aa8.32□□□□□ -1.08
PRE7YBL041W AGE1Q04412 482 aa8.32□□□□□ -1.08
PRE7YBL041W GEA2P39993 1459 aaKnown RBP8.31□□□□□ -1.08
PRE7YBL041W BNI1P41832 1953 aa8.3□□□□□ -1.08
PRE7YBL041W DIT2P21595 489 aa8.3□□□□□ -1.08
PRE7YBL041W TY1B-JR2P47100 1755 aaKnown RBP8.3□□□□□ -1.08
PRE7YBL041W TY1B-ER2Q03619 1755 aa8.3□□□□□ -1.08
PRE7YBL041W TY1B-MR1Q04214 1755 aa8.3□□□□□ -1.08
PRE7YBL041W TY1B-MR2Q04670 1755 aaKnown RBP8.3□□□□□ -1.08
PRE7YBL041W TY1B-LR1Q12088 1755 aaKnown RBP8.3□□□□□ -1.08
PRE7YBL041W TY1B-NL1Q12112 1755 aa8.3□□□□□ -1.08
PRE7YBL041W TY1B-GR1Q12141 1755 aa8.3□□□□□ -1.08
PRE7YBL041W TY1B-BLQ12490 1755 aa8.3□□□□□ -1.08
PRE7YBL041W TSC11P40061 1430 aa8.29□□□□□ -1.08
PRE7YBL041W NUP159P40477 1460 aa8.28□□□□□ -1.08
PRE7YBL041W VTH1P40438 1549 aa8.28□□□□□ -1.08
PRE7YBL041W VTH2P40890 1549 aa8.28□□□□□ -1.08
PRE7YBL041W NTE1Q04958 1679 aa8.27□□□□□ -1.08
PRE7YBL041W SPB4P25808 606 aaPredicted RBP8.27□□□□□ -1.09
PRE7YBL041W TUB4P53378 473 aa8.27□□□□□ -1.09
PRE7YBL041W YRF1-1P0CX20 1796 aa8.27□□□□□ -1.09
PRE7YBL041W YRF1-5P0CX21 1796 aa8.27□□□□□ -1.09
PRE7YBL041W YRF1-8P0CX22 1796 aa8.27□□□□□ -1.09
PRE7YBL041W PAT1P25644 796 aaKnown RBP8.26□□□□□ -1.09
PRE7YBL041W NIS1P53939 407 aa8.26□□□□□ -1.09
PRE7YBL041W MOD5P07884 428 aa8.25□□□□□ -1.09
PRE7YBL041W SIT4P20604 311 aa8.25□□□□□ -1.09
PRE7YBL041W TEA1P47988 759 aa8.25□□□□□ -1.09
PRE7YBL041W RTF1P53064 558 aa8.25□□□□□ -1.09
PRE7YBL041W VPS15P22219 1454 aa8.25□□□□□ -1.09
PRE7YBL041W RPO21P04050 1733 aaKnown RBP8.23□□□□□ -1.09
PRE7YBL041W YNL115CP53925 644 aa8.23□□□□□ -1.09
PRE7YBL041W MYO4P32492 1471 aa8.23□□□□□ -1.09
PRE7YBL041W BRE2P43132 505 aa8.22□□□□□ -1.09
PRE7YBL041W CDC4P07834 779 aa8.21□□□□□ -1.1
PRE7YBL041W ITT1Q04638 464 aa8.21□□□□□ -1.1
PRE7YBL041W YTA7P40340 1379 aa8.21□□□□□ -1.1
PRE7YBL041W RGA1P39083 1007 aa8.2□□□□□ -1.1
PRE7YBL041W HED1Q03937 162 aa8.18□□□□□ -1.1
PRE7YBL041W PUS5Q06244 254 aa8.18□□□□□ -1.1
PRE7YBL041W FPK1P53739 893 aa8.17□□□□□ -1.1
PRE7YBL041W DRS2P39524 1355 aa8.17□□□□□ -1.1
PRE7YBL041W SNQ2P32568 1501 aaKnown RBP8.17□□□□□ -1.1
PRE7YBL041W SNT2P53127 1403 aa8.15□□□□□ -1.1
PRE7YBL041W MMS1Q06211 1407 aa8.15□□□□□ -1.1
PRE7YBL041W MET32Q12041 191 aa8.15□□□□□ -1.1
PRE7YBL041W STH1P32597 1359 aa8.11□□□□□ -1.11
PRE7YBL041W SLY41P22215 453 aa8.11□□□□□ -1.11
PRE7YBL041W YMR196WQ04336 1088 aa8.11□□□□□ -1.11
PRE7YBL041W PDC1P06169 563 aaKnown RBP8.1□□□□□ -1.11
PRE7YBL041W RGA2Q06407 1009 aa8.1□□□□□ -1.11
PRE7YBL041W SCJ1P25303 377 aa8.09□□□□□ -1.11
PRE7YBL041W RRD1P40454 393 aaKnown RBP8.09□□□□□ -1.11
PRE7YBL041W GCR2Q01722 534 aa8.09□□□□□ -1.11
PRE7YBL041W NUP170P38181 1502 aa8.08□□□□□ -1.12
PRE7YBL041W TPD3P31383 635 aa8.07□□□□□ -1.12
PRE7YBL041W KXD1P53158 218 aa8.07□□□□□ -1.12
PRE7YBL041W PDR12Q02785 1511 aa8.07□□□□□ -1.12
PRE7YBL041W SPO14P36126 1683 aa8.06□□□□□ -1.12
PRE7YBL041W GLC3P32775 704 aa8.06□□□□□ -1.12
PRE7YBL041W MET10P39692 1035 aa8.06□□□□□ -1.12
PRE7YBL041W HXT10P43581 546 aa8.06□□□□□ -1.12
PRE7YBL041W HST2P53686 357 aa8.06□□□□□ -1.12
PRE7YBL041W ULS1Q08562 1619 aa8.06□□□□□ -1.12
PRE7YBL041W IRC20Q06554 1556 aa8.05□□□□□ -1.12
PRE7YBL041W MLP2P40457 1679 aa8.05□□□□□ -1.12
PRE7YBL041W ASH1P34233 588 aa8.05□□□□□ -1.12
PRE7YBL041W TRM1P15565 570 aaKnown RBP8.04□□□□□ -1.12
PRE7YBL041W YDL206WQ12424 762 aa8.04□□□□□ -1.12
PRE7YBL041W DNF2Q12675 1612 aa8.03□□□□□ -1.12
PRE7YBL041W AFT1P22149 690 aa8.03□□□□□ -1.12
PRE7YBL041W GAR1P28007 205 aaKnown RBP8.03□□□□□ -1.12
PRE7YBL041W YNR021WP53723 404 aaKnown RBP8.03□□□□□ -1.12
PRE7YBL041W YPL062WQ02781 134 aa8.03□□□□□ -1.12
PRE7YBL041W MET22P32179 357 aa8.02□□□□□ -1.13
PRE7YBL041W RTT106P40161 455 aa8.01□□□□□ -1.13
PRE7YBL041W PUS6P53294 404 aa8.01□□□□□ -1.13
PRE7YBL041W ATF2P53296 535 aa8.01□□□□□ -1.13
PRE7YBL041W GDB1Q06625 1536 aa8□□□□□ -1.13
PRE7YBL041W RPA14P50106 137 aa8□□□□□ -1.13
PRE7YBL041W TBF1Q02457 562 aa8□□□□□ -1.13
PRE7YBL041W MMP1Q12372 583 aa8□□□□□ -1.13
PRE7YBL041W ESS1P22696 170 aa7.99□□□□□ -1.13
PRE7YBL041W HST3P53687 447 aa7.99□□□□□ -1.13
PRE7YBL041W PDR15Q04182 1529 aaKnown RBP7.98□□□□□ -1.13
PRE7YBL041W TRM3Q07527 1436 aa7.98□□□□□ -1.13
PRE7YBL041W YPR097WQ06839 1073 aa7.98□□□□□ -1.13
PRE7YBL041W ALR1Q08269 859 aa7.98□□□□□ -1.13
PRE7YBL041W ENV9Q08651 330 aa7.98□□□□□ -1.13
PRE7YBL041W TYW1Q08960 810 aaKnown RBP7.98□□□□□ -1.13
PRE7YBL041W IQG1Q12280 1495 aa7.98□□□□□ -1.13
PRE7YBL041W YJU3P28321 313 aa7.97□□□□□ -1.13
PRE7YBL041W SYH1Q02875 849 aaKnown RBP7.97□□□□□ -1.13
PRE7YBL041W DOP1Q03921 1698 aa7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms