RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 POLR1AO95602 1720 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-222ENST00000641587 FBXO31Q5XUX0 539 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-222ENST00000641587 CAMSAP2Q08AD1 1489 aa16.1■□□□□ 0.17
PHGDH-222ENST00000641587 CCDC141Q6ZP82 1450 aa16.1■□□□□ 0.17
PHGDH-222ENST00000641587 KIF3BO15066 747 aa16.09■□□□□ 0.17
PHGDH-222ENST00000641587 TNRQ92752 1358 aa16.09■□□□□ 0.17
PHGDH-222ENST00000641587 KDM5DQ9BY66 1539 aa16.09■□□□□ 0.17
PHGDH-222ENST00000641587 PZPP20742 1482 aa16.08■□□□□ 0.16
PHGDH-222ENST00000641587 NCOA2Q15596 1464 aa16.08■□□□□ 0.16
PHGDH-222ENST00000641587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.04■□□□□ 0.16
PHGDH-222ENST00000641587 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
PHGDH-222ENST00000641587 PIP4K2BP78356 416 aa16.03■□□□□ 0.16
PHGDH-222ENST00000641587 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
PHGDH-222ENST00000641587 WASHC2CQ9Y4E1 1318 aa16.02■□□□□ 0.16
PHGDH-222ENST00000641587 VWDEQ8N2E2 1590 aa16.02■□□□□ 0.16
PHGDH-222ENST00000641587 HSPA1LP34931 641 aa16.02■□□□□ 0.16
PHGDH-222ENST00000641587 CPS1P31327 1500 aa16.02■□□□□ 0.15
PHGDH-222ENST00000641587 FAM135AQ9P2D6 1515 aa16.02■□□□□ 0.15
PHGDH-222ENST00000641587 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
PHGDH-222ENST00000641587 MED1Q15648 1581 aaPredicted RBP16■□□□□ 0.15
PHGDH-222ENST00000641587 UGGT1Q9NYU2 1555 aa16■□□□□ 0.15
PHGDH-222ENST00000641587 MIA2Q96PC5 1412 aa16■□□□□ 0.15
PHGDH-222ENST00000641587 ALKQ9UM73 1620 aa15.99■□□□□ 0.15
PHGDH-222ENST00000641587 NLRP1Q9C000 1473 aa15.98■□□□□ 0.15
PHGDH-222ENST00000641587 RNF17Q9BXT8 1623 aaKnown RBP15.98■□□□□ 0.15
PHGDH-222ENST00000641587 NPHP4O75161 1426 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-222ENST00000641587 STRCP1A6NGW2 1772 aa15.98■□□□□ 0.15
PHGDH-222ENST00000641587 ANKLE2Q86XL3 938 aa15.97■□□□□ 0.15
PHGDH-222ENST00000641587 ABCC3O15438 1527 aa15.97■□□□□ 0.15
PHGDH-222ENST00000641587 DEPDC5O75140 1603 aa15.97■□□□□ 0.15
PHGDH-222ENST00000641587 IQGAP1P46940 1657 aa15.96■□□□□ 0.15
PHGDH-222ENST00000641587 MED14O60244 1454 aa15.96■□□□□ 0.14
PHGDH-222ENST00000641587 MROH1Q8NDA8 1641 aa15.95■□□□□ 0.14
PHGDH-222ENST00000641587 CEP152O94986 1710 aa15.95■□□□□ 0.14
PHGDH-222ENST00000641587 TOM1O60784 492 aa15.95■□□□□ 0.14
PHGDH-222ENST00000641587 RSPH4AQ5TD94 716 aa15.95■□□□□ 0.14
PHGDH-222ENST00000641587 THEMISQ8N1K5 641 aaPredicted RBP15.95■□□□□ 0.14
PHGDH-222ENST00000641587 TSPY4P0CV99 314 aa15.94■□□□□ 0.14
PHGDH-222ENST00000641587 TSPY10P0CW01 314 aa15.94■□□□□ 0.14
PHGDH-222ENST00000641587 ERVK-7P63135 1459 aa15.94■□□□□ 0.14
PHGDH-222ENST00000641587 LRRC9Q6ZRR7 1453 aa15.94■□□□□ 0.14
PHGDH-222ENST00000641587 MAST1Q9Y2H9 1570 aa15.94■□□□□ 0.14
PHGDH-222ENST00000641587 ZC3H13Q5T200 1668 aaKnown RBP15.94■□□□□ 0.14
PHGDH-222ENST00000641587 CFAP65Q6ZU64 1925 aaKnown RBP15.94■□□□□ 0.14
PHGDH-222ENST00000641587 SENP3Q9H4L4 574 aaPredicted RBP15.93■□□□□ 0.14
PHGDH-222ENST00000641587 EIF2AK4Q9P2K8 1649 aaKnown RBP15.91■□□□□ 0.14
PHGDH-222ENST00000641587 VPS8Q8N3P4 1428 aa15.91■□□□□ 0.14
PHGDH-222ENST00000641587 LRRC7Q96NW7 1537 aa15.9■□□□□ 0.14
PHGDH-222ENST00000641587 KANK4Q5T7N3 995 aaPredicted RBP15.9■□□□□ 0.14
PHGDH-222ENST00000641587 UBR1Q8IWV7 1749 aa15.9■□□□□ 0.14
PHGDH-222ENST00000641587 SYNMO15061 1565 aa15.87■□□□□ 0.13
PHGDH-222ENST00000641587 LOC105371045A0A1W2PR82 267 aa15.86■□□□□ 0.13
PHGDH-222ENST00000641587 MYOM3Q5VTT5 1437 aa15.85■□□□□ 0.13
PHGDH-222ENST00000641587 SCAF11Q99590 1463 aaKnown RBP15.84■□□□□ 0.13
PHGDH-222ENST00000641587 DUOX2Q9NRD8 1548 aa15.84■□□□□ 0.13
PHGDH-222ENST00000641587 PRDM15P57071 1507 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-222ENST00000641587 CROCC2H7BZ55 1655 aa15.83■□□□□ 0.13
PHGDH-222ENST00000641587 XIRP1Q702N8 1843 aaKnown RBP15.83■□□□□ 0.12
PHGDH-222ENST00000641587 LTKP29376 864 aa15.83■□□□□ 0.12
PHGDH-222ENST00000641587 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
PHGDH-222ENST00000641587 ARHGAP23Q9P227 1491 aa15.82■□□□□ 0.12
PHGDH-222ENST00000641587 PIK3C2BO00750 1634 aa15.81■□□□□ 0.12
PHGDH-222ENST00000641587 SLIT1O75093 1534 aa15.81■□□□□ 0.12
PHGDH-222ENST00000641587 KIF15Q9NS87 1388 aa15.81■□□□□ 0.12
PHGDH-222ENST00000641587 MAP3K1Q13233 1512 aa15.8■□□□□ 0.12
PHGDH-222ENST00000641587 ABCC5O15440 1437 aa15.79■□□□□ 0.12
PHGDH-222ENST00000641587 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
PHGDH-222ENST00000641587 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
PHGDH-222ENST00000641587 ARHGAP31Q2M1Z3 1444 aa15.78■□□□□ 0.12
PHGDH-222ENST00000641587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.125e-16■■□□□ 13.6
PHGDH-222ENST00000641587 PTPN23Q9H3S7 1636 aa15.78■□□□□ 0.12
PHGDH-222ENST00000641587 ERBINQ96RT1 1412 aa15.77■□□□□ 0.12
PHGDH-222ENST00000641587 DAPK1P53355 1430 aa15.75■□□□□ 0.11
PHGDH-222ENST00000641587 TMEM2Q9UHN6 1383 aa15.74■□□□□ 0.11
PHGDH-222ENST00000641587 RGS17Q9UGC6 210 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-222ENST00000641587 EID1Q9Y6B2 187 aa15.72■□□□□ 0.11
PHGDH-222ENST00000641587 EFCAB6Q5THR3 1501 aa15.72■□□□□ 0.11
PHGDH-222ENST00000641587 RBM33Q96EV2 1170 aaKnown RBP15.71■□□□□ 0.11
PHGDH-222ENST00000641587 CHIC2Q9UKJ5 165 aa15.71■□□□□ 0.11
PHGDH-222ENST00000641587 FGD6Q6ZV73 1430 aa15.7■□□□□ 0.1
PHGDH-222ENST00000641587 IDI1Q13907 227 aa15.7■□□□□ 0.1
PHGDH-222ENST00000641587 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
PHGDH-222ENST00000641587 TMEM94Q12767 1356 aa15.7■□□□□ 0.1
PHGDH-222ENST00000641587 LMTK2Q8IWU2 1503 aa15.69■□□□□ 0.1
PHGDH-222ENST00000641587 KANK1Q14678 1352 aa15.69■□□□□ 0.1
PHGDH-222ENST00000641587 KDM5AP29375 1690 aaKnown RBP15.69■□□□□ 0.1
PHGDH-222ENST00000641587 TET3O43151 1660 aa15.68■□□□□ 0.1
PHGDH-222ENST00000641587 ROBO1Q9Y6N7 1651 aa15.68■□□□□ 0.1
PHGDH-222ENST00000641587 SLC26A8Q96RN1 970 aa15.68■□□□□ 0.1
PHGDH-222ENST00000641587 ADGRB3O60242 1522 aa15.68■□□□□ 0.1
PHGDH-222ENST00000641587 NOS1P29475 1434 aa15.67■□□□□ 0.1
PHGDH-222ENST00000641587 FAM135BQ49AJ0 1406 aa15.67■□□□□ 0.1
PHGDH-222ENST00000641587 ANKRD30AQ9BXX3 1397 aa15.65■□□□□ 0.1
PHGDH-222ENST00000641587 MYO5BQ9ULV0 1848 aa15.65■□□□□ 0.1
PHGDH-222ENST00000641587 NWD1Q149M9 1564 aa15.65■□□□□ 0.1
PHGDH-222ENST00000641587 KCNA6P17658 529 aa15.64■□□□□ 0.09
PHGDH-222ENST00000641587 POTEAQ6S8J7 498 aa15.63■□□□□ 0.09
PHGDH-222ENST00000641587 PROSER2Q86WR7 435 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-222ENST00000641587 APLP2Q06481 763 aa15.62■□□□□ 0.09
PHGDH-222ENST00000641587 NKTRP30414 1462 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms